Protein–RNA interactions for Protein: P47142

VPS25, Vacuolar protein-sorting-associated protein 25, yeastyeast

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS25P47142 YML009W-BYML009W-B 477 nt21.56■■□□□ 1.04
VPS25P47142 NSR1YGR159C 1245 nt21.21■□□□□ 0.99
VPS25P47142 NOP1YDL014W 984 nt21.12■□□□□ 0.97
VPS25P47142 YKL036CYKL036C 393 nt19.69■□□□□ 0.74
VPS25P47142 Q0297Q0297 156 nt18.52■□□□□ 0.56
VPS25P47142 MDJ1YFL016C 1536 nt18.51■□□□□ 0.55
VPS25P47142 YJL027CYJL027C 417 nt18.44■□□□□ 0.54
VPS25P47142 SRX1YKL086W 384 nt18.4■□□□□ 0.54
VPS25P47142 SCS3YGL126W 1143 nt18■□□□□ 0.47
VPS25P47142 YCR051WYCR051W 669 nt17.51■□□□□ 0.39
VPS25P47142 YOL085CYOL085C 342 nt17.02■□□□□ 0.32
VPS25P47142 PKP1YIL042C 1185 nt16.72■□□□□ 0.27
VPS25P47142 RPP1BYDL130W 321 nt16.62■□□□□ 0.25
VPS25P47142 TRN1tP(UGG)A 72 nt16.45■□□□□ 0.22
VPS25P47142 SUF9tP(UGG)F 72 nt16.45■□□□□ 0.22
VPS25P47142 SUF8tP(UGG)H 72 nt16.45■□□□□ 0.22
VPS25P47142 tP(UGG)LtP(UGG)L 72 nt16.45■□□□□ 0.22
VPS25P47142 SUF7tP(UGG)M 72 nt16.45■□□□□ 0.22
VPS25P47142 tP(UGG)N1tP(UGG)N1 72 nt16.45■□□□□ 0.22
VPS25P47142 tP(UGG)N2tP(UGG)N2 72 nt16.45■□□□□ 0.22
VPS25P47142 tP(UGG)O1tP(UGG)O1 72 nt16.45■□□□□ 0.22
VPS25P47142 SUF11tP(UGG)O2 72 nt16.45■□□□□ 0.22
VPS25P47142 DBP2YNL112W 1641 nt16.45■□□□□ 0.22
VPS25P47142 CCC1YLR220W 969 nt16.34■□□□□ 0.21
VPS25P47142 SCJ1YMR214W 1134 nt16.33■□□□□ 0.2
VPS25P47142 ATS1YAL020C 1002 nt16.2■□□□□ 0.18
VPS25P47142 SCR1SCR1 522 nt15.82■□□□□ 0.12
VPS25P47142 PET122YER153C 765 nt15.81■□□□□ 0.12
VPS25P47142 YBR190WYBR190W 312 nt15.77■□□□□ 0.12
VPS25P47142 tP(UGG)O3tP(UGG)O3 72 nt15.67■□□□□ 0.1
VPS25P47142 RVS167YDR388W 1449 nt15.67■□□□□ 0.1
VPS25P47142 RTC3YHR087W 336 nt15.48■□□□□ 0.07
VPS25P47142 RRN5YLR141W 1092 nt15.42■□□□□ 0.06
VPS25P47142 RSB1YOR049C 1065 nt15.2■□□□□ 0.02
VPS25P47142 YDJ1YNL064C 1230 nt15.16■□□□□ 0.02
VPS25P47142 SHR5YOL110W 714 nt15.13■□□□□ 0.01
VPS25P47142 YER088W-BYER088W-B 147 nt15.1■□□□□ 0.01
VPS25P47142 PST2YDR032C 597 nt14.94□□□□□ -0.02
VPS25P47142 GAR1YHR089C 618 nt14.79□□□□□ -0.04
VPS25P47142 DEP1YAL013W 1218 nt14.6□□□□□ -0.07
VPS25P47142 URN1YPR152C 1398 nt14.54□□□□□ -0.08
VPS25P47142 YKL097CYKL097C 411 nt14.53□□□□□ -0.08
VPS25P47142 RPN10YHR200W 807 nt14.45□□□□□ -0.1
VPS25P47142 YNL208WYNL208W 600 nt14.43□□□□□ -0.1
VPS25P47142 TIR1YER011W 765 nt14.28□□□□□ -0.12
VPS25P47142 SHU1YHL006C 453 nt14.26□□□□□ -0.13
VPS25P47142 OPI9YLR338W 858 nt14.26□□□□□ -0.13
VPS25P47142 SAH1YER043C 1350 nt14.09□□□□□ -0.15
VPS25P47142 PUT4YOR348C 1884 nt14.04□□□□□ -0.16
VPS25P47142 SSA1YAL005C 1929 nt14□□□□□ -0.17
VPS25P47142 YAL037C-BYAL037C-B 975 nt13.97□□□□□ -0.17
VPS25P47142 YJR018WYJR018W 363 nt13.9□□□□□ -0.18
VPS25P47142 PUN1YLR414C 792 nt13.89□□□□□ -0.19
VPS25P47142 ARE1YCR048W 1833 nt13.87□□□□□ -0.19
VPS25P47142 YOR139CYOR139C 393 nt13.83□□□□□ -0.2
VPS25P47142 RPP2BYDR382W 333 nt13.75□□□□□ -0.21
VPS25P47142 NPL3YDR432W 1245 nt13.75□□□□□ -0.21
VPS25P47142 SRB2YHR041C 633 nt13.74□□□□□ -0.21
VPS25P47142 YGR021WYGR021W 873 nt13.73□□□□□ -0.21
VPS25P47142 YHR049C-AYHR049C-A 297 nt13.72□□□□□ -0.21
VPS25P47142 WWM1YFL010C 636 nt13.68□□□□□ -0.22
VPS25P47142 POA1YBR022W 534 nt13.67□□□□□ -0.22
VPS25P47142 PTC2YER089C 1395 nt13.65□□□□□ -0.22
VPS25P47142 HOM6YJR139C 1080 nt13.63□□□□□ -0.23
VPS25P47142 YJR120WYJR120W 351 nt13.62□□□□□ -0.23
VPS25P47142 MNP1YGL068W 585 nt13.58□□□□□ -0.24
VPS25P47142 YOL037CYOL037C 354 nt13.53□□□□□ -0.24
VPS25P47142 BUD23YCR047C 828 nt13.48□□□□□ -0.25
VPS25P47142 YFL021C-AYFL021C-A 855 nt13.48□□□□□ -0.25
VPS25P47142 BDH2YAL061W 1254 nt13.46□□□□□ -0.25
VPS25P47142 NAB2YGL122C 1578 nt13.45□□□□□ -0.26
VPS25P47142 RKM5YLR137W 1104 nt13.44□□□□□ -0.26
VPS25P47142 INM2YDR287W 879 nt13.41□□□□□ -0.26
VPS25P47142 LSM3YLR438C-A 270 nt13.36□□□□□ -0.27
VPS25P47142 FPR4YLR449W 1179 nt13.33□□□□□ -0.28
VPS25P47142 DAL1YIR027C 1383 nt13.32□□□□□ -0.28
VPS25P47142 tM(CAU)CtM(CAU)C 72 nt13.3□□□□□ -0.28
VPS25P47142 IMT4tM(CAU)E 72 nt13.3□□□□□ -0.28
VPS25P47142 IMT3tM(CAU)J3 72 nt13.3□□□□□ -0.28
VPS25P47142 IMT1tM(CAU)O1 72 nt13.3□□□□□ -0.28
VPS25P47142 IMT2tM(CAU)P 72 nt13.3□□□□□ -0.28
VPS25P47142 BSC6YOL137W 1494 nt13.29□□□□□ -0.28
VPS25P47142 YBL100CYBL100C 315 nt13.29□□□□□ -0.28
VPS25P47142 SSA3YBL075C 1950 nt13.29□□□□□ -0.28
VPS25P47142 TRM9YML014W 840 nt13.22□□□□□ -0.29
VPS25P47142 FIS1YIL065C 468 nt13.2□□□□□ -0.3
VPS25P47142 YLR281CYLR281C 468 nt13.17□□□□□ -0.3
VPS25P47142 PHO4YFR034C 939 nt13.16□□□□□ -0.3
VPS25P47142 PUS2YGL063W 1113 nt13.15□□□□□ -0.3
VPS25P47142 FUN26YAL022C 1554 nt13.13□□□□□ -0.31
VPS25P47142 WHI5YOR083W 888 nt13.1□□□□□ -0.31
VPS25P47142 CCT6YDR188W 1641 nt13□□□□□ -0.33
VPS25P47142 ALF1YNL148C 765 nt12.95□□□□□ -0.34
VPS25P47142 SUF2tP(AGG)C 72 nt12.94□□□□□ -0.34
VPS25P47142 SUF10tP(AGG)N 72 nt12.94□□□□□ -0.34
VPS25P47142 YLR154C-GYLR154C-G 150 nt12.9□□□□□ -0.34
VPS25P47142 MOT3YMR070W 1473 nt12.88□□□□□ -0.35
VPS25P47142 IMP2'YIL154C 1041 nt12.87□□□□□ -0.35
VPS25P47142 DSK2YMR276W 1122 nt12.86□□□□□ -0.35
VPS25P47142 FMP45YDL222C 930 nt12.81□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms