RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Gm16253D3Z167 63 aa7.53□□□□□ -1.2
Ldb3-207ENSMUST00000227819 Sigmar1O55242 223 aa7.53□□□□□ -1.2
Ldb3-207ENSMUST00000227819 4930535I16RikQ9CUI2 172 aa7.53□□□□□ -1.2
Ldb3-207ENSMUST00000227819 Igkv1-35A0A0G2JDE5 120 aa7.5□□□□□ -1.21
Ldb3-207ENSMUST00000227819 Gm10061D3Z714 54 aa7.5□□□□□ -1.21
Ldb3-207ENSMUST00000227819 Igkv8-28A0A0G2JE47 121 aa7.49□□□□□ -1.21
Ldb3-207ENSMUST00000227819 P06320 134 aa7.49□□□□□ -1.21
Ldb3-207ENSMUST00000227819 Xcl1P47993 114 aa7.49□□□□□ -1.21
Ldb3-207ENSMUST00000227819 2310034C09RikQ9D746 214 aa7.49□□□□□ -1.21
Ldb3-207ENSMUST00000227819 Igkv2-109A0A075B5K6 120 aa7.47□□□□□ -1.21
Ldb3-207ENSMUST00000227819 Gm10318A0A1W2P728 225 aa7.46□□□□□ -1.22
Ldb3-207ENSMUST00000227819 BatfO35284 125 aa7.44□□□□□ -1.22
Ldb3-207ENSMUST00000227819 Tmem213Q08EA8 116 aa7.44□□□□□ -1.22
Ldb3-207ENSMUST00000227819 Chchd10Q7TNL9 138 aa7.44□□□□□ -1.22
Ldb3-207ENSMUST00000227819 Gm11569B1AQB1 180 aa7.42□□□□□ -1.22
Ldb3-207ENSMUST00000227819 Krtap19-3Q925H6 87 aa7.42□□□□□ -1.22
Ldb3-207ENSMUST00000227819 Ighv10-3A0A075B5T6 119 aa7.41□□□□□ -1.22
Ldb3-207ENSMUST00000227819 Krtap4-2B1AQ85 167 aa7.41□□□□□ -1.22
Ldb3-207ENSMUST00000227819 Krtap16-3Q8C1I6 86 aa7.4□□□□□ -1.22
Ldb3-207ENSMUST00000227819 Rpl37Q9D823 97 aa7.4□□□□□ -1.22
Ldb3-207ENSMUST00000227819 Ifitm6A0A1B0GS75 124 aa7.39□□□□□ -1.23
Ldb3-207ENSMUST00000227819 Krtap19-1Q925H2 87 aa7.39□□□□□ -1.23
Ldb3-207ENSMUST00000227819 Cox6a2P43023 97 aa7.38□□□□□ -1.23
Ldb3-207ENSMUST00000227819 Trav14d-3-dv8A0A075B619 120 aa7.37□□□□□ -1.23
Ldb3-207ENSMUST00000227819 Pde6gP09174 87 aa7.37□□□□□ -1.23
Ldb3-207ENSMUST00000227819 Sfta2E9PXB6 77 aa7.36□□□□□ -1.23
Ldb3-207ENSMUST00000227819 9530003J23RikQ8BM26 151 aa7.36□□□□□ -1.23
Ldb3-207ENSMUST00000227819 Atp5eP56382 52 aa7.36□□□□□ -1.23
Ldb3-207ENSMUST00000227819 Gm26620Q9CY65 116 aa7.36□□□□□ -1.23
Ldb3-207ENSMUST00000227819 1700042G07RikB1AUF7 90 aa7.35□□□□□ -1.23
Ldb3-207ENSMUST00000227819 Igkv8-30A0A140T8M3 121 aa7.33□□□□□ -1.24
Ldb3-207ENSMUST00000227819 Ormdl1Q921I0 153 aa7.33□□□□□ -1.24
Ldb3-207ENSMUST00000227819 Cypt15B1AXS0 87 aa7.31□□□□□ -1.24
Ldb3-207ENSMUST00000227819 Rbm3O89086 153 aaKnown RBP7.3□□□□□ -1.24
Ldb3-207ENSMUST00000227819 Igkv8-27A0A0G2JF28 120 aa7.3□□□□□ -1.24
Ldb3-207ENSMUST00000227819 Anapc13Q8R034 74 aa7.3□□□□□ -1.24
Ldb3-207ENSMUST00000227819 Gm12353A2AGJ4 60 aa7.27□□□□□ -1.25
Ldb3-207ENSMUST00000227819 Krtap1-4Q3V2D6 188 aa7.26□□□□□ -1.25
Ldb3-207ENSMUST00000227819 Ubl5Q9EPV8 73 aa7.26□□□□□ -1.25
Ldb3-207ENSMUST00000227819 Tmem254aP0DN89 123 aa7.25□□□□□ -1.25
Ldb3-207ENSMUST00000227819 Tmem254bP0DN90 123 aa7.25□□□□□ -1.25
Ldb3-207ENSMUST00000227819 Tmem254cP0DN91 123 aa7.25□□□□□ -1.25
Ldb3-207ENSMUST00000227819 Gm10308Q9CVR5 141 aa7.25□□□□□ -1.25
Ldb3-207ENSMUST00000227819 Lce1gQ9D195 139 aa7.25□□□□□ -1.25
Ldb3-207ENSMUST00000227819 Defa21Q8C1P2 93 aa7.24□□□□□ -1.25
Ldb3-207ENSMUST00000227819 Sprr2jO70561 109 aa7.24□□□□□ -1.25
Ldb3-207ENSMUST00000227819 Igkv3-3A0A140T8Q0 119 aa7.23□□□□□ -1.25
Ldb3-207ENSMUST00000227819 SspoQ8CG65 4998 aa7.22□□□□□ -1.25
Ldb3-207ENSMUST00000227819 C130032M10RikQ8C888 123 aa7.2□□□□□ -1.26
Ldb3-207ENSMUST00000227819 Gm44790A0A0N4SV91 103 aa7.17□□□□□ -1.26
Ldb3-207ENSMUST00000227819 Fam229aB2KGE5 128 aa7.17□□□□□ -1.26
Ldb3-207ENSMUST00000227819 7530416G11RikJ3QJX6 159 aa7.16□□□□□ -1.26
Ldb3-207ENSMUST00000227819 Igkv8-19A0A0G2JFN8 121 aa7.14□□□□□ -1.27
Ldb3-207ENSMUST00000227819 Rnase13Q5GAM7 153 aa7.13□□□□□ -1.27
Ldb3-207ENSMUST00000227819 Syne2Q6ZWQ0 6874 aaKnown RBP7.13□□□□□ -1.27
Ldb3-207ENSMUST00000227819 Hist1h4aP62806 103 aaKnown RBP7.11□□□□□ -1.27
Ldb3-207ENSMUST00000227819 Ndufc1Q9CQY9 76 aa7.11□□□□□ -1.27
Ldb3-207ENSMUST00000227819 MplkipQ9D011 178 aa7.11□□□□□ -1.27
Ldb3-207ENSMUST00000227819 Gm20604F8WIA3 75 aa7.08□□□□□ -1.28
Ldb3-207ENSMUST00000227819 Gm37013Q8K491 104 aa7.08□□□□□ -1.28
Ldb3-207ENSMUST00000227819 UqcrqQ9CQ69 82 aa7.07□□□□□ -1.28
Ldb3-207ENSMUST00000227819 Mrpl34Q99N91 92 aa7.04□□□□□ -1.28
Ldb3-207ENSMUST00000227819 Reg3aO09037 175 aa7.04□□□□□ -1.28
Ldb3-207ENSMUST00000227819 Apoc4Q61268 124 aa7.04□□□□□ -1.28
Ldb3-207ENSMUST00000227819 Serp2Q6TAW2 65 aa7.02□□□□□ -1.29
Ldb3-207ENSMUST00000227819 Gm10267M0QWD8 85 aa7.01□□□□□ -1.29
Ldb3-207ENSMUST00000227819 Scgb1b2O35176 93 aa7□□□□□ -1.29
Ldb3-207ENSMUST00000227819 BikO70337 150 aa7□□□□□ -1.29
Ldb3-207ENSMUST00000227819 Defb13Q8R2I4 64 aa6.99□□□□□ -1.29
Ldb3-207ENSMUST00000227819 Gm11555B1AQ89 175 aa6.98□□□□□ -1.29
Ldb3-207ENSMUST00000227819 Gm11596B1AQB0 205 aa6.98□□□□□ -1.29
Ldb3-207ENSMUST00000227819 Chtf8P0CG14 533 aa6.95□□□□□ -1.3
Ldb3-207ENSMUST00000227819 4930518I15RikQ3V2W7 57 aa6.95□□□□□ -1.3
Ldb3-207ENSMUST00000227819 Prr13Q9CQJ5 137 aa6.93□□□□□ -1.3
Ldb3-207ENSMUST00000227819 Gm28539A0A087WSL9 92 aa6.91□□□□□ -1.3
Ldb3-207ENSMUST00000227819 Prr15lQ8JZM2 100 aa6.91□□□□□ -1.3
Ldb3-207ENSMUST00000227819 Krtap3-2Q9D638 99 aa6.89□□□□□ -1.31
Ldb3-207ENSMUST00000227819 Krtap3-3Q9D7P0 99 aa6.89□□□□□ -1.31
Ldb3-207ENSMUST00000227819 Naa38Q9D2U5 125 aa6.87□□□□□ -1.31
Ldb3-207ENSMUST00000227819 Samd13D3YUG0 102 aa6.86□□□□□ -1.31
Ldb3-207ENSMUST00000227819 Pcp4P63054 62 aa6.86□□□□□ -1.31
Ldb3-207ENSMUST00000227819 Gm17416Q30KP4 66 aa6.86□□□□□ -1.31
Ldb3-207ENSMUST00000227819 Krtap4-6Q3V4B7 195 aa6.85□□□□□ -1.31
Ldb3-207ENSMUST00000227819 Fam229bQ8CF36 80 aa6.85□□□□□ -1.31
Ldb3-207ENSMUST00000227819 Krtap13-1Q8K198 168 aa6.85□□□□□ -1.31
Ldb3-207ENSMUST00000227819 B230307C23RikQ8BLB2 64 aa6.85□□□□□ -1.31
Ldb3-207ENSMUST00000227819 Muc5bE9Q5I3 4800 aa6.83□□□□□ -1.32
Ldb3-207ENSMUST00000227819 B930094E09RikQ8C4T2 136 aa6.83□□□□□ -1.32
Ldb3-207ENSMUST00000227819 A0A286YE49 62 aa6.82□□□□□ -1.32
Ldb3-207ENSMUST00000227819 Smlr1J3QMJ4 66 aa6.82□□□□□ -1.32
Ldb3-207ENSMUST00000227819 Tmem258P61166 79 aa6.82□□□□□ -1.32
Ldb3-207ENSMUST00000227819 Spink8Q09TK9 105 aa6.8□□□□□ -1.32
Ldb3-207ENSMUST00000227819 Gm4491E0CX42 125 aa6.79□□□□□ -1.32
Ldb3-207ENSMUST00000227819 Gm19935A0A1B0GSF9 52 aa6.79□□□□□ -1.32
Ldb3-207ENSMUST00000227819 SmcpP15265 143 aa6.75□□□□□ -1.33
Ldb3-207ENSMUST00000227819 Atox1O08997 68 aaKnown RBP6.73□□□□□ -1.33
Ldb3-207ENSMUST00000227819 Krtap4-1Q3UUY3 169 aa6.73□□□□□ -1.33
Ldb3-207ENSMUST00000227819 Coa6Q8BGD8 79 aa6.73□□□□□ -1.33
Ldb3-207ENSMUST00000227819 Krtap1-5A2A590 122 aa6.72□□□□□ -1.33
Ldb3-207ENSMUST00000227819 Lce1jD3YUU5 139 aa6.72□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms