RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Gm35339A0A140LHH9 1649 aa32.26■■■□□ 2.76
Ldb3-207ENSMUST00000227819 NischQ80TM9 1593 aa31.73■■■□□ 2.67
Ldb3-207ENSMUST00000227819 Abcc8B2RUS7 1588 aa30.75■■■□□ 2.51
Ldb3-207ENSMUST00000227819 Abcc9P70170 1546 aa30.68■■■□□ 2.5
Ldb3-207ENSMUST00000227819 ScribQ80U72 1612 aa29.88■■■□□ 2.37
Ldb3-207ENSMUST00000227819 NacadQ5SWP3 1504 aa28.82■■■□□ 2.2
Ldb3-207ENSMUST00000227819 Kdm5dQ62240 1548 aa28.81■■■□□ 2.2
Ldb3-207ENSMUST00000227819 Sycp2Q9CUU3 1500 aa28.29■■■□□ 2.12
Ldb3-207ENSMUST00000227819 Dcaf1Q80TR8 1506 aa28.19■■■□□ 2.1
Ldb3-207ENSMUST00000227819 BicraF8VPZ9 1578 aa27.98■■■□□ 2.07
Ldb3-207ENSMUST00000227819 Dnajc5bQ9CQ94 199 aa27.67■■■□□ 2.02
Ldb3-207ENSMUST00000227819 Rb1cc1Q9ESK9 1588 aa27.66■■■□□ 2.02
Ldb3-207ENSMUST00000227819 Baz1aO88379 1555 aa27.21■■□□□ 1.95
Ldb3-207ENSMUST00000227819 Pds5bQ4VA53 1446 aaKnown RBP27.19■■□□□ 1.94
Ldb3-207ENSMUST00000227819 Rhox8Q6VSS7 320 aa27.18■■□□□ 1.94
Ldb3-207ENSMUST00000227819 Thoc2B1AZI6 1594 aaKnown RBP27.14■■□□□ 1.93
Ldb3-207ENSMUST00000227819 Ccdc180J3QNE4 1664 aa27.1■■□□□ 1.93
Ldb3-207ENSMUST00000227819 Crybg2B7ZCC2 1516 aa27.05■■□□□ 1.92
Ldb3-207ENSMUST00000227819 Zcchc6Q5BLK4 1491 aaKnown RBP26.91■■□□□ 1.9
Ldb3-207ENSMUST00000227819 Atad2bE9Q166 1460 aaKnown RBP26.88■■□□□ 1.89
Ldb3-207ENSMUST00000227819 Cc2d2aQ8CFW7 1633 aa26.7■■□□□ 1.87
Ldb3-207ENSMUST00000227819 Ercc6F8VPZ5 1481 aa26.65■■□□□ 1.86
Ldb3-207ENSMUST00000227819 Smarca2Q6DIC0 1577 aa26.59■■□□□ 1.85
Ldb3-207ENSMUST00000227819 Smarca4Q3TKT4 1613 aaKnown RBP26.59■■□□□ 1.85
Ldb3-207ENSMUST00000227819 Iqgap2Q3UQ44 1575 aa26.51■■□□□ 1.83
Ldb3-207ENSMUST00000227819 Cecr2E9Q2Z1 1453 aa26.47■■□□□ 1.83
Ldb3-207ENSMUST00000227819 Fam135aQ6NS59 1506 aa26.44■■□□□ 1.82
Ldb3-207ENSMUST00000227819 Wdr62Q3U3T8 1523 aa26.31■■□□□ 1.8
Ldb3-207ENSMUST00000227819 Frmpd1A2AKB4 1549 aa26.28■■□□□ 1.8
Ldb3-207ENSMUST00000227819 Phldb1Q6PDH0 1371 aaKnown RBP26.15■■□□□ 1.78
Ldb3-207ENSMUST00000227819 Baz1bQ9Z277 1479 aa25.99■■□□□ 1.75
Ldb3-207ENSMUST00000227819 Unc13aQ4KUS2 1712 aa25.97■■□□□ 1.75
Ldb3-207ENSMUST00000227819 Ubl4bQ9CQ84 188 aa25.95■■□□□ 1.74
Ldb3-207ENSMUST00000227819 Mrc2Q64449 1479 aa25.82■■□□□ 1.72
Ldb3-207ENSMUST00000227819 CftrP26361 1476 aa25.77■■□□□ 1.72
Ldb3-207ENSMUST00000227819 Cttnbp2B9EJA2 1648 aa25.77■■□□□ 1.72
Ldb3-207ENSMUST00000227819 Rtl1Q7M732 1744 aa25.76■■□□□ 1.71
Ldb3-207ENSMUST00000227819 Synj1Q8CHC4 1574 aa25.74■■□□□ 1.71
Ldb3-207ENSMUST00000227819 Brd4Q9ESU6 1400 aaKnown RBP25.58■■□□□ 1.69
Ldb3-207ENSMUST00000227819 Ccdc136Q3TVA9 1136 aa25.5■■□□□ 1.67
Ldb3-207ENSMUST00000227819 Trim41Q5NCC3 630 aa25.36■■□□□ 1.65
Ldb3-207ENSMUST00000227819 Lrriq1Q0P5X1 1673 aa25.33■■□□□ 1.65
Ldb3-207ENSMUST00000227819 Esf1Q3V1V3 845 aaKnown RBP25.32■■□□□ 1.64
Ldb3-207ENSMUST00000227819 Cux2P70298 1426 aa25.29■■□□□ 1.64
Ldb3-207ENSMUST00000227819 Kif15Q6P9L6 1387 aa25.25■■□□□ 1.63
Ldb3-207ENSMUST00000227819 Dnajc5P60904 198 aa25.24■■□□□ 1.63
Ldb3-207ENSMUST00000227819 Rsf1E9PWW9 1441 aaKnown RBP25.24■■□□□ 1.63
Ldb3-207ENSMUST00000227819 Kif21aQ9QXL2 1672 aa25.21■■□□□ 1.63
Ldb3-207ENSMUST00000227819 Lamc3Q9R0B6 1581 aa25.08■■□□□ 1.61
Ldb3-207ENSMUST00000227819 Npm1Q61937 292 aaKnown RBP24.97■■□□□ 1.59
Ldb3-207ENSMUST00000227819 Eif4g3Q80XI3 1579 aaKnown RBP24.94■■□□□ 1.58
Ldb3-207ENSMUST00000227819 Cep164Q5DU05 1446 aa24.87■■□□□ 1.57
Ldb3-207ENSMUST00000227819 Urb2E9Q7L1 1524 aaKnown RBP24.78■■□□□ 1.56
Ldb3-207ENSMUST00000227819 Shroom2A2ALU4 1481 aa24.74■■□□□ 1.55
Ldb3-207ENSMUST00000227819 Il27Q8K3I6 234 aa24.74■■□□□ 1.55
Ldb3-207ENSMUST00000227819 TnnQ80Z71 1560 aa24.74■■□□□ 1.55
Ldb3-207ENSMUST00000227819 Dhx29Q6PGC1 1365 aaKnown RBP24.74■■□□□ 1.55
Ldb3-207ENSMUST00000227819 Plb1Q3TTY0 1478 aa24.72■■□□□ 1.55
Ldb3-207ENSMUST00000227819 Ccdc18Q640L5 1455 aa24.69■■□□□ 1.54
Ldb3-207ENSMUST00000227819 Top2bQ64511 1612 aa24.65■■□□□ 1.54
Ldb3-207ENSMUST00000227819 Crocc2F6XLV1 1638 aa24.63■■□□□ 1.53
Ldb3-207ENSMUST00000227819 Camsap1A2AHC3 1581 aa24.63■■□□□ 1.53
Ldb3-207ENSMUST00000227819 Golga3P55937 1487 aa24.62■■□□□ 1.53
Ldb3-207ENSMUST00000227819 LrpprcQ6PB66 1392 aaKnown RBP24.62■■□□□ 1.53
Ldb3-207ENSMUST00000227819 Cngb1E1AZ71 1325 aa24.58■■□□□ 1.53
Ldb3-207ENSMUST00000227819 Col17a1Q07563 1470 aa24.49■■□□□ 1.51
Ldb3-207ENSMUST00000227819 Rusc2Q80U22 1514 aa24.46■■□□□ 1.51
Ldb3-207ENSMUST00000227819 PogzQ8BZH4 1409 aaKnown RBP24.46■■□□□ 1.51
Ldb3-207ENSMUST00000227819 Ift140E9PY46 1464 aa24.45■■□□□ 1.5
Ldb3-207ENSMUST00000227819 Pabpn1Q8CCS6 302 aaKnown RBP24.45■■□□□ 1.5
Ldb3-207ENSMUST00000227819 Fmn1Q05860 1466 aa24.4■■□□□ 1.5
Ldb3-207ENSMUST00000227819 Pelp1Q9DBD5 1123 aaKnown RBP24.35■■□□□ 1.49
Ldb3-207ENSMUST00000227819 Duox2A2AQ99 1517 aa24.35■■□□□ 1.49
Ldb3-207ENSMUST00000227819 Disp1Q3TDN0 1521 aa24.25■■□□□ 1.47
Ldb3-207ENSMUST00000227819 Grin2bQ01097 1482 aa24.25■■□□□ 1.47
Ldb3-207ENSMUST00000227819 Samd9lQ69Z37 1561 aa24.21■■□□□ 1.47
Ldb3-207ENSMUST00000227819 Setd1bQ8CFT2 1985 aa24.19■■□□□ 1.46
Ldb3-207ENSMUST00000227819 Nup160Q9Z0W3 1402 aaKnown RBP24.15■■□□□ 1.46
Ldb3-207ENSMUST00000227819 Zcchc11B2RX14 1644 aaKnown RBP24.14■■□□□ 1.46
Ldb3-207ENSMUST00000227819 Pbrm1Q8BSQ9 1634 aaKnown RBP24.14■■□□□ 1.45
Ldb3-207ENSMUST00000227819 Cc2d2bA0A286YDU8 1405 aa24.1■■□□□ 1.45
Ldb3-207ENSMUST00000227819 Efcab5A0JP43 1406 aa24.05■■□□□ 1.44
Ldb3-207ENSMUST00000227819 Rad54l2Q99NG0 1466 aa24.04■■□□□ 1.44
Ldb3-207ENSMUST00000227819 Grin2aP35436 1464 aa23.98■■□□□ 1.43
Ldb3-207ENSMUST00000227819 Magi3Q9EQJ9 1476 aa23.97■■□□□ 1.43
Ldb3-207ENSMUST00000227819 AqrQ8CFQ3 1481 aaKnown RBP23.96■■□□□ 1.43
Ldb3-207ENSMUST00000227819 Ccdc88bQ4QRL3 1481 aa23.94■■□□□ 1.42
Ldb3-207ENSMUST00000227819 Adgrl3Q80TS3 1537 aa23.91■■□□□ 1.42
Ldb3-207ENSMUST00000227819 Fgd6Q69ZL1 1399 aa23.9■■□□□ 1.42
Ldb3-207ENSMUST00000227819 Top2aQ01320 1528 aaKnown RBP23.89■■□□□ 1.41
Ldb3-207ENSMUST00000227819 NrkQ9R0G8 1455 aa23.87■■□□□ 1.41
Ldb3-207ENSMUST00000227819 Cep170Q6A065 1588 aa23.87■■□□□ 1.41
Ldb3-207ENSMUST00000227819 PtprkP35822 1457 aa23.87■■□□□ 1.41
Ldb3-207ENSMUST00000227819 Gapvd1Q6PAR5 1458 aa23.84■■□□□ 1.41
Ldb3-207ENSMUST00000227819 Arhgef5E9Q7D5 1581 aa23.82■■□□□ 1.4
Ldb3-207ENSMUST00000227819 Pla2r1Q62028 1487 aa23.81■■□□□ 1.4
Ldb3-207ENSMUST00000227819 AknaQ80VW7 1404 aa23.79■■□□□ 1.4
Ldb3-207ENSMUST00000227819 Shroom4Q1W617 1475 aa23.78■■□□□ 1.4
Ldb3-207ENSMUST00000227819 Ttbk1Q6PCN3 1308 aa23.78■■□□□ 1.4
Ldb3-207ENSMUST00000227819 Pcdh10E9PXQ7 1057 aa23.78■■□□□ 1.4
Retrieved 100 of 22,080 RNA–protein pairs in 1197.1 ms