RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 HydinQ80W93 5154 aa13.97□□□□□ -0.17
Pcf11-205ENSMUST00000208255 Reg3aO09037 175 aa13.95□□□□□ -0.18
Pcf11-205ENSMUST00000208255 Hist1h4aP62806 103 aaKnown RBP13.95□□□□□ -0.18
Pcf11-205ENSMUST00000208255 Igkv8-19A0A0G2JFN8 121 aa13.95□□□□□ -0.18
Pcf11-205ENSMUST00000208255 Cystm1Q8K353 104 aa13.93□□□□□ -0.18
Pcf11-205ENSMUST00000208255 Dph3Q8K0W9 82 aa13.93□□□□□ -0.18
Pcf11-205ENSMUST00000208255 Lce1mQ9CR91 182 aa13.88□□□□□ -0.19
Pcf11-205ENSMUST00000208255 Mycbp2Q7TPH6 4711 aa13.87□□□□□ -0.19
Pcf11-205ENSMUST00000208255 Gm2310J3QNJ2 377 aa13.85□□□□□ -0.19
Pcf11-205ENSMUST00000208255 PcloQ9QYX7 5068 aa13.83□□□□□ -0.2
Pcf11-205ENSMUST00000208255 Prr15lQ8JZM2 100 aa13.82□□□□□ -0.2
Pcf11-205ENSMUST00000208255 Anapc13Q8R034 74 aa13.82□□□□□ -0.2
Pcf11-205ENSMUST00000208255 Fam229bQ8CF36 80 aa13.81□□□□□ -0.2
Pcf11-205ENSMUST00000208255 Rps29P62274 56 aa13.78□□□□□ -0.2
Pcf11-205ENSMUST00000208255 Gm9736A0A1W2P7N1 277 aa13.76□□□□□ -0.21
Pcf11-205ENSMUST00000208255 Defa21Q8C1P2 93 aa13.74□□□□□ -0.21
Pcf11-205ENSMUST00000208255 Cypt15B1AXS0 87 aa13.7□□□□□ -0.22
Pcf11-205ENSMUST00000208255 Ndufc1Q9CQY9 76 aa13.69□□□□□ -0.22
Pcf11-205ENSMUST00000208255 Igkv3-3A0A140T8Q0 119 aa13.67□□□□□ -0.22
Pcf11-205ENSMUST00000208255 7530416G11RikJ3QJX6 159 aa13.64□□□□□ -0.23
Pcf11-205ENSMUST00000208255 Spink8Q09TK9 105 aa13.59□□□□□ -0.23
Pcf11-205ENSMUST00000208255 A0A286YE49 62 aa13.57□□□□□ -0.24
Pcf11-205ENSMUST00000208255 4930518I15RikQ3V2W7 57 aa13.57□□□□□ -0.24
Pcf11-205ENSMUST00000208255 Lrp2A2ARV4 4660 aa13.57□□□□□ -0.24
Pcf11-205ENSMUST00000208255 Naa38Q9D2U5 125 aa13.55□□□□□ -0.24
Pcf11-205ENSMUST00000208255 Samd13D3YUG0 102 aa13.54□□□□□ -0.24
Pcf11-205ENSMUST00000208255 GhrhP16043 103 aa13.51□□□□□ -0.25
Pcf11-205ENSMUST00000208255 Serp2Q6TAW2 65 aa13.5□□□□□ -0.25
Pcf11-205ENSMUST00000208255 Gm11939A2A592 99 aa13.47□□□□□ -0.25
Pcf11-205ENSMUST00000208255 Herc1E9PZP8 4859 aa13.43□□□□□ -0.26
Pcf11-205ENSMUST00000208255 BikO70337 150 aa13.4□□□□□ -0.26
Pcf11-205ENSMUST00000208255 Gm5965D3Z724 196 aa13.39□□□□□ -0.27
Pcf11-205ENSMUST00000208255 Gm10267M0QWD8 85 aa13.39□□□□□ -0.27
Pcf11-205ENSMUST00000208255 Gm18596A0A1W2P860 280 aa13.38□□□□□ -0.27
Pcf11-205ENSMUST00000208255 Defb13Q8R2I4 64 aa13.38□□□□□ -0.27
Pcf11-205ENSMUST00000208255 Gm26620Q9CY65 116 aa13.36□□□□□ -0.27
Pcf11-205ENSMUST00000208255 1700074P13RikQ9D9G7 251 aa13.35□□□□□ -0.27
Pcf11-205ENSMUST00000208255 Gm5767A0A0J9YTU8 78 aa13.33□□□□□ -0.27
Pcf11-205ENSMUST00000208255 A930033H14RikG5E8X6 103 aa13.33□□□□□ -0.27
Pcf11-205ENSMUST00000208255 Apoc4Q61268 124 aa13.32□□□□□ -0.28
Pcf11-205ENSMUST00000208255 Prr13Q9CQJ5 137 aa13.27□□□□□ -0.28
Pcf11-205ENSMUST00000208255 B230307C23RikQ8BLB2 64 aa13.27□□□□□ -0.29
Pcf11-205ENSMUST00000208255 Krtap3-2Q9D638 99 aa13.16□□□□□ -0.3
Pcf11-205ENSMUST00000208255 Krtap3-3Q9D7P0 99 aa13.16□□□□□ -0.3
Pcf11-205ENSMUST00000208255 Coa6Q8BGD8 79 aa13.13□□□□□ -0.31
Pcf11-205ENSMUST00000208255 Atox1O08997 68 aaKnown RBP13.13□□□□□ -0.31
Pcf11-205ENSMUST00000208255 Scgb1b2O35176 93 aa13.12□□□□□ -0.31
Pcf11-205ENSMUST00000208255 Spint4Q9D263 159 aa13.12□□□□□ -0.31
Pcf11-205ENSMUST00000208255 Gm9821Q8K076 103 aa13.1□□□□□ -0.31
Pcf11-205ENSMUST00000208255 Chtf8P0CG14 533 aa13.02□□□□□ -0.33
Pcf11-205ENSMUST00000208255 Gm28539A0A087WSL9 92 aa12.99□□□□□ -0.33
Pcf11-205ENSMUST00000208255 Krtap15-1Q9QZU5 150 aa12.99□□□□□ -0.33
Pcf11-205ENSMUST00000208255 Prm1P02319 51 aa12.95□□□□□ -0.34
Pcf11-205ENSMUST00000208255 Ush2AQ2QI47 5193 aa12.9□□□□□ -0.34
Pcf11-205ENSMUST00000208255 Rpl37Q9D823 97 aa12.89□□□□□ -0.35
Pcf11-205ENSMUST00000208255 Defb38Q7TNV7 63 aa12.88□□□□□ -0.35
Pcf11-205ENSMUST00000208255 Gm10160F6Y577 67 aa12.86□□□□□ -0.35
Pcf11-205ENSMUST00000208255 Tmem258P61166 79 aa12.85□□□□□ -0.35
Pcf11-205ENSMUST00000208255 Gm9789Q8BIG3 52 aa12.85□□□□□ -0.35
Pcf11-205ENSMUST00000208255 Gm7735D3YX18 52 aa12.84□□□□□ -0.35
Pcf11-205ENSMUST00000208255 SmcpP15265 143 aa12.83□□□□□ -0.36
Pcf11-205ENSMUST00000208255 Gm4491E0CX42 125 aa12.82□□□□□ -0.36
Pcf11-205ENSMUST00000208255 Coa5Q99M07 74 aa12.8□□□□□ -0.36
Pcf11-205ENSMUST00000208255 Gm10999F6Q4M4 69 aa12.79□□□□□ -0.36
Pcf11-205ENSMUST00000208255 Gm21798J3QNU5 87 aa12.79□□□□□ -0.36
Pcf11-205ENSMUST00000208255 Q8BGJ3 129 aa12.77□□□□□ -0.36
Pcf11-205ENSMUST00000208255 Smlr1J3QMJ4 66 aa12.76□□□□□ -0.37
Pcf11-205ENSMUST00000208255 Sec61bQ9CQS8 96 aaKnown RBP12.76□□□□□ -0.37
Pcf11-205ENSMUST00000208255 Gm19935A0A1B0GSF9 52 aa12.76□□□□□ -0.37
Pcf11-205ENSMUST00000208255 SnurfQ9WU12 71 aa12.73□□□□□ -0.37
Pcf11-205ENSMUST00000208255 Hmcn2A2AJ76 5100 aa12.71□□□□□ -0.38
Pcf11-205ENSMUST00000208255 Gm10643Q3URG9 111 aa12.67□□□□□ -0.38
Pcf11-205ENSMUST00000208255 2310079G19RikQ9D6L6 185 aa12.67□□□□□ -0.38
Pcf11-205ENSMUST00000208255 2310034C09RikQ9D746 214 aa12.66□□□□□ -0.38
Pcf11-205ENSMUST00000208255 Pet100P0DJE0 76 aa12.65□□□□□ -0.38
Pcf11-205ENSMUST00000208255 Rnase13Q5GAM7 153 aa12.64□□□□□ -0.39
Pcf11-205ENSMUST00000208255 2310057N15RikQ9D6T8 200 aa12.64□□□□□ -0.39
Pcf11-205ENSMUST00000208255 Ubr4A2AN08 5180 aa12.57□□□□□ -0.4
Pcf11-205ENSMUST00000208255 4930507D05RikQ8C9C9 103 aa12.54□□□□□ -0.4
Pcf11-205ENSMUST00000208255 Cdc42se1Q8BHL7 80 aa12.51□□□□□ -0.41
Pcf11-205ENSMUST00000208255 Smim20D3Z7Q2 69 aa12.49□□□□□ -0.41
Pcf11-205ENSMUST00000208255 4932415D10RikA0A1W2P6U8 4986 aa12.45□□□□□ -0.42
Pcf11-205ENSMUST00000208255 Gm17416Q30KP4 66 aa12.45□□□□□ -0.42
Pcf11-205ENSMUST00000208255 Serp1Q9Z1W5 66 aa12.45□□□□□ -0.42
Pcf11-205ENSMUST00000208255 9230102O04RikA2ASX7 82 aa12.44□□□□□ -0.42
Pcf11-205ENSMUST00000208255 Rps28P62858 69 aaKnown RBP12.42□□□□□ -0.42
Pcf11-205ENSMUST00000208255 Brk1Q91VR8 75 aa12.37□□□□□ -0.43
Pcf11-205ENSMUST00000208255 Pcp4P63054 62 aa12.35□□□□□ -0.43
Pcf11-205ENSMUST00000208255 Krtap1-3A2A588 173 aa12.31□□□□□ -0.44
Pcf11-205ENSMUST00000208255 Gm10197F6QEY5 67 aa12.31□□□□□ -0.44
Pcf11-205ENSMUST00000208255 Crct1Q6PAI5 102 aa12.26□□□□□ -0.45
Pcf11-205ENSMUST00000208255 Defb1P56386 69 aa12.25□□□□□ -0.45
Pcf11-205ENSMUST00000208255 Gm20661K7N787 53 aa12.25□□□□□ -0.45
Pcf11-205ENSMUST00000208255 Phxr4P15974 95 aa12.18□□□□□ -0.46
Pcf11-205ENSMUST00000208255 Krtap16-3Q8C1I6 86 aa12.17□□□□□ -0.46
Pcf11-205ENSMUST00000208255 Fam229aB2KGE5 128 aa12.14□□□□□ -0.47
Pcf11-205ENSMUST00000208255 SptssbQ925E8 76 aa12.12□□□□□ -0.47
Pcf11-205ENSMUST00000208255 H2al1aQ5M8Q2 105 aa12.11□□□□□ -0.47
Pcf11-205ENSMUST00000208255 H2al1eQ810S6 105 aa12.11□□□□□ -0.47
Pcf11-205ENSMUST00000208255 ZanO88799 5376 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms