RNA–Protein interactions for RNA: ENSMUST00000200043.4

Pdlim5-212, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-212ENSMUST00000200043 Igkv8-21A0A140T8P7 120 aa8.7□□□□□ -1.02
Pdlim5-212ENSMUST00000200043 4932415D10RikA0A1W2P6U8 4986 aa8.7□□□□□ -1.02
Pdlim5-212ENSMUST00000200043 Sprr2jO70561 109 aa8.69□□□□□ -1.02
Pdlim5-212ENSMUST00000200043 Cystm1Q8K353 104 aa8.69□□□□□ -1.02
Pdlim5-212ENSMUST00000200043 Gm5767A0A0J9YTU8 78 aa8.67□□□□□ -1.02
Pdlim5-212ENSMUST00000200043 Rbm3O89086 153 aaKnown RBP8.67□□□□□ -1.02
Pdlim5-212ENSMUST00000200043 Ubr4A2AN08 5180 aa8.66□□□□□ -1.02
Pdlim5-212ENSMUST00000200043 Gm44790A0A0N4SV91 103 aa8.65□□□□□ -1.03
Pdlim5-212ENSMUST00000200043 Xcl1P47993 114 aa8.64□□□□□ -1.03
Pdlim5-212ENSMUST00000200043 Trav14d-3-dv8A0A075B619 120 aa8.62□□□□□ -1.03
Pdlim5-212ENSMUST00000200043 Gm11939A2A592 99 aa8.61□□□□□ -1.03
Pdlim5-212ENSMUST00000200043 Atp5eP56382 52 aa8.6□□□□□ -1.03
Pdlim5-212ENSMUST00000200043 Anapc13Q8R034 74 aa8.59□□□□□ -1.03
Pdlim5-212ENSMUST00000200043 Mrpl34Q99N91 92 aa8.56□□□□□ -1.04
Pdlim5-212ENSMUST00000200043 Pde6gP09174 87 aa8.56□□□□□ -1.04
Pdlim5-212ENSMUST00000200043 UqcrqQ9CQ69 82 aa8.56□□□□□ -1.04
Pdlim5-212ENSMUST00000200043 Defa21Q8C1P2 93 aa8.54□□□□□ -1.04
Pdlim5-212ENSMUST00000200043 C130032M10RikQ8C888 123 aa8.54□□□□□ -1.04
Pdlim5-212ENSMUST00000200043 Cypt15B1AXS0 87 aa8.53□□□□□ -1.04
Pdlim5-212ENSMUST00000200043 Gm37013Q8K491 104 aa8.53□□□□□ -1.04
Pdlim5-212ENSMUST00000200043 Gm20604F8WIA3 75 aa8.49□□□□□ -1.05
Pdlim5-212ENSMUST00000200043 Gm9821Q8K076 103 aa8.49□□□□□ -1.05
Pdlim5-212ENSMUST00000200043 Krtap15-1Q9QZU5 150 aa8.49□□□□□ -1.05
Pdlim5-212ENSMUST00000200043 Ormdl1Q921I0 153 aa8.48□□□□□ -1.05
Pdlim5-212ENSMUST00000200043 Reg3aO09037 175 aa8.47□□□□□ -1.05
Pdlim5-212ENSMUST00000200043 Gm26620Q9CY65 116 aa8.45□□□□□ -1.06
Pdlim5-212ENSMUST00000200043 2310057N15RikQ9D6T8 200 aa8.42□□□□□ -1.06
Pdlim5-212ENSMUST00000200043 Igkv3-3A0A140T8Q0 119 aa8.4□□□□□ -1.06
Pdlim5-212ENSMUST00000200043 MplkipQ9D011 178 aa8.39□□□□□ -1.07
Pdlim5-212ENSMUST00000200043 Tmem254aP0DN89 123 aa8.38□□□□□ -1.07
Pdlim5-212ENSMUST00000200043 Tmem254bP0DN90 123 aa8.38□□□□□ -1.07
Pdlim5-212ENSMUST00000200043 Tmem254cP0DN91 123 aa8.38□□□□□ -1.07
Pdlim5-212ENSMUST00000200043 Hist1h4aP62806 103 aaKnown RBP8.35□□□□□ -1.07
Pdlim5-212ENSMUST00000200043 Ubl5Q9EPV8 73 aa8.35□□□□□ -1.07
Pdlim5-212ENSMUST00000200043 Pcp4P63054 62 aa8.33□□□□□ -1.08
Pdlim5-212ENSMUST00000200043 Rpl37Q9D823 97 aa8.33□□□□□ -1.08
Pdlim5-212ENSMUST00000200043 Prr13Q9CQJ5 137 aa8.31□□□□□ -1.08
Pdlim5-212ENSMUST00000200043 Krtap1-3A2A588 173 aa8.31□□□□□ -1.08
Pdlim5-212ENSMUST00000200043 Sec61bQ9CQS8 96 aaKnown RBP8.31□□□□□ -1.08
Pdlim5-212ENSMUST00000200043 Crct1Q6PAI5 102 aa8.3□□□□□ -1.08
Pdlim5-212ENSMUST00000200043 Igkv8-19A0A0G2JFN8 121 aa8.29□□□□□ -1.08
Pdlim5-212ENSMUST00000200043 ZanO88799 5376 aa8.29□□□□□ -1.08
Pdlim5-212ENSMUST00000200043 Gm10267M0QWD8 85 aa8.28□□□□□ -1.08
Pdlim5-212ENSMUST00000200043 2310034C09RikQ9D746 214 aa8.27□□□□□ -1.09
Pdlim5-212ENSMUST00000200043 BikO70337 150 aa8.26□□□□□ -1.09
Pdlim5-212ENSMUST00000200043 Defb13Q8R2I4 64 aa8.25□□□□□ -1.09
Pdlim5-212ENSMUST00000200043 Gm28539A0A087WSL9 92 aa8.22□□□□□ -1.09
Pdlim5-212ENSMUST00000200043 Fat4Q2PZL6 4981 aa8.21□□□□□ -1.1
Pdlim5-212ENSMUST00000200043 7530416G11RikJ3QJX6 159 aa8.2□□□□□ -1.1
Pdlim5-212ENSMUST00000200043 Apoc4Q61268 124 aa8.2□□□□□ -1.1
Pdlim5-212ENSMUST00000200043 Ndufc1Q9CQY9 76 aa8.2□□□□□ -1.1
Pdlim5-212ENSMUST00000200043 Serp2Q6TAW2 65 aa8.19□□□□□ -1.1
Pdlim5-212ENSMUST00000200043 Scgb1b2O35176 93 aa8.18□□□□□ -1.1
Pdlim5-212ENSMUST00000200043 Prr15lQ8JZM2 100 aa8.17□□□□□ -1.1
Pdlim5-212ENSMUST00000200043 4930518I15RikQ3V2W7 57 aa8.13□□□□□ -1.11
Pdlim5-212ENSMUST00000200043 SmcpP15265 143 aa8.12□□□□□ -1.11
Pdlim5-212ENSMUST00000200043 Krtap3-2Q9D638 99 aa8.12□□□□□ -1.11
Pdlim5-212ENSMUST00000200043 Krtap3-3Q9D7P0 99 aa8.12□□□□□ -1.11
Pdlim5-212ENSMUST00000200043 Rnase13Q5GAM7 153 aa8.1□□□□□ -1.11
Pdlim5-212ENSMUST00000200043 Rnf213E9Q555 5152 aaKnown RBP8.09□□□□□ -1.11
Pdlim5-212ENSMUST00000200043 LorP18165 486 aa8.09□□□□□ -1.11
Pdlim5-212ENSMUST00000200043 Krtap16-3Q8C1I6 86 aa8.07□□□□□ -1.12
Pdlim5-212ENSMUST00000200043 A0A286YE49 62 aa8.05□□□□□ -1.12
Pdlim5-212ENSMUST00000200043 Gm10318A0A1W2P728 225 aa8.05□□□□□ -1.12
Pdlim5-212ENSMUST00000200043 Naa38Q9D2U5 125 aa8.05□□□□□ -1.12
Pdlim5-212ENSMUST00000200043 Fam229bQ8CF36 80 aa8.04□□□□□ -1.12
Pdlim5-212ENSMUST00000200043 Krtap19-1Q925H2 87 aa8.04□□□□□ -1.12
Pdlim5-212ENSMUST00000200043 Krtap19-3Q925H6 87 aa8.04□□□□□ -1.12
Pdlim5-212ENSMUST00000200043 Smim20D3Z7Q2 69 aa8.01□□□□□ -1.13
Pdlim5-212ENSMUST00000200043 Samd13D3YUG0 102 aa8.01□□□□□ -1.13
Pdlim5-212ENSMUST00000200043 Tmem258P61166 79 aa8.01□□□□□ -1.13
Pdlim5-212ENSMUST00000200043 Spink8Q09TK9 105 aa8.01□□□□□ -1.13
Pdlim5-212ENSMUST00000200043 Gm19935A0A1B0GSF9 52 aa7.98□□□□□ -1.13
Pdlim5-212ENSMUST00000200043 Gm4491E0CX42 125 aa7.97□□□□□ -1.13
Pdlim5-212ENSMUST00000200043 B230307C23RikQ8BLB2 64 aa7.97□□□□□ -1.13
Pdlim5-212ENSMUST00000200043 Rps28P62858 69 aaKnown RBP7.94□□□□□ -1.14
Pdlim5-212ENSMUST00000200043 1700074P13RikQ9D9G7 251 aa7.9□□□□□ -1.14
Pdlim5-212ENSMUST00000200043 Smlr1J3QMJ4 66 aa7.88□□□□□ -1.15
Pdlim5-212ENSMUST00000200043 1700042G07RikB1AUF7 90 aa7.87□□□□□ -1.15
Pdlim5-212ENSMUST00000200043 Fam229aB2KGE5 128 aa7.87□□□□□ -1.15
Pdlim5-212ENSMUST00000200043 Gm19402J3QJV4 266 aa7.87□□□□□ -1.15
Pdlim5-212ENSMUST00000200043 Gm17416Q30KP4 66 aa7.87□□□□□ -1.15
Pdlim5-212ENSMUST00000200043 Krtap1-4Q3V2D6 188 aa7.8□□□□□ -1.16
Pdlim5-212ENSMUST00000200043 Q8BGJ3 129 aa7.8□□□□□ -1.16
Pdlim5-212ENSMUST00000200043 Gm10999F6Q4M4 69 aa7.79□□□□□ -1.16
Pdlim5-212ENSMUST00000200043 Coa6Q8BGD8 79 aa7.79□□□□□ -1.16
Pdlim5-212ENSMUST00000200043 Pet100P0DJE0 76 aa7.78□□□□□ -1.16
Pdlim5-212ENSMUST00000200043 SvipQ3UZP4 77 aa7.78□□□□□ -1.16
Pdlim5-212ENSMUST00000200043 Gm10061D3Z714 54 aa7.76□□□□□ -1.17
Pdlim5-212ENSMUST00000200043 Serp1Q9Z1W5 66 aa7.76□□□□□ -1.17
Pdlim5-212ENSMUST00000200043 SspoQ8CG65 4998 aa7.76□□□□□ -1.17
Pdlim5-212ENSMUST00000200043 Spint4Q9D263 159 aa7.75□□□□□ -1.17
Pdlim5-212ENSMUST00000200043 Atox1O08997 68 aaKnown RBP7.74□□□□□ -1.17
Pdlim5-212ENSMUST00000200043 Defb38Q7TNV7 63 aa7.74□□□□□ -1.17
Pdlim5-212ENSMUST00000200043 SnurfQ9WU12 71 aa7.73□□□□□ -1.17
Pdlim5-212ENSMUST00000200043 Krtap13-1Q8K198 168 aa7.72□□□□□ -1.17
Pdlim5-212ENSMUST00000200043 Chtf8P0CG14 533 aa7.71□□□□□ -1.17
Pdlim5-212ENSMUST00000200043 9230102O04RikA2ASX7 82 aa7.67□□□□□ -1.18
Pdlim5-212ENSMUST00000200043 Brk1Q91VR8 75 aa7.67□□□□□ -1.18
Pdlim5-212ENSMUST00000200043 H2al1aQ5M8Q2 105 aa7.65□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms