RNA–Protein interactions for RNA: ENSMUST00000200043.4

Pdlim5-212, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-212ENSMUST00000200043 Gm35339A0A140LHH9 1649 aa34.98■■■■□ 3.19
Pdlim5-212ENSMUST00000200043 NischQ80TM9 1593 aa34.56■■■■□ 3.12
Pdlim5-212ENSMUST00000200043 Abcc9P70170 1546 aa33.5■■■□□ 2.95
Pdlim5-212ENSMUST00000200043 Abcc8B2RUS7 1588 aa33.32■■■□□ 2.93
Pdlim5-212ENSMUST00000200043 ScribQ80U72 1612 aa32.08■■■□□ 2.73
Pdlim5-212ENSMUST00000200043 Kdm5dQ62240 1548 aa31.03■■■□□ 2.56
Pdlim5-212ENSMUST00000200043 NacadQ5SWP3 1504 aa30.96■■■□□ 2.55
Pdlim5-212ENSMUST00000200043 Dcaf1Q80TR8 1506 aa30.69■■■□□ 2.5
Pdlim5-212ENSMUST00000200043 Sycp2Q9CUU3 1500 aa30.37■■■□□ 2.45
Pdlim5-212ENSMUST00000200043 Rb1cc1Q9ESK9 1588 aa30.18■■■□□ 2.42
Pdlim5-212ENSMUST00000200043 Rhox8Q6VSS7 320 aa30.02■■■□□ 2.4
Pdlim5-212ENSMUST00000200043 BicraF8VPZ9 1578 aa29.97■■■□□ 2.39
Pdlim5-212ENSMUST00000200043 Ccdc180J3QNE4 1664 aa29.81■■■□□ 2.36
Pdlim5-212ENSMUST00000200043 Baz1aO88379 1555 aa29.74■■■□□ 2.35
Pdlim5-212ENSMUST00000200043 Crybg2B7ZCC2 1516 aa29.47■■■□□ 2.31
Pdlim5-212ENSMUST00000200043 Zcchc6Q5BLK4 1491 aaKnown RBP29.23■■■□□ 2.27
Pdlim5-212ENSMUST00000200043 Pds5bQ4VA53 1446 aaKnown RBP28.94■■■□□ 2.22
Pdlim5-212ENSMUST00000200043 Smarca2Q6DIC0 1577 aa28.92■■■□□ 2.22
Pdlim5-212ENSMUST00000200043 Rtl1Q7M732 1744 aa28.84■■■□□ 2.21
Pdlim5-212ENSMUST00000200043 Atad2bE9Q166 1460 aaKnown RBP28.75■■■□□ 2.19
Pdlim5-212ENSMUST00000200043 Thoc2B1AZI6 1594 aaKnown RBP28.74■■■□□ 2.19
Pdlim5-212ENSMUST00000200043 Smarca4Q3TKT4 1613 aaKnown RBP28.7■■■□□ 2.19
Pdlim5-212ENSMUST00000200043 Cecr2E9Q2Z1 1453 aa28.69■■■□□ 2.18
Pdlim5-212ENSMUST00000200043 Dnajc5bQ9CQ94 199 aa28.67■■■□□ 2.18
Pdlim5-212ENSMUST00000200043 Iqgap2Q3UQ44 1575 aa28.52■■■□□ 2.16
Pdlim5-212ENSMUST00000200043 Ercc6F8VPZ5 1481 aa28.4■■■□□ 2.14
Pdlim5-212ENSMUST00000200043 Cc2d2aQ8CFW7 1633 aa28.28■■■□□ 2.12
Pdlim5-212ENSMUST00000200043 Wdr62Q3U3T8 1523 aa28.22■■■□□ 2.11
Pdlim5-212ENSMUST00000200043 Frmpd1A2AKB4 1549 aa28.15■■■□□ 2.1
Pdlim5-212ENSMUST00000200043 Synj1Q8CHC4 1574 aa28.11■■■□□ 2.09
Pdlim5-212ENSMUST00000200043 Cttnbp2B9EJA2 1648 aa28.11■■■□□ 2.09
Pdlim5-212ENSMUST00000200043 Fam135aQ6NS59 1506 aa28.1■■■□□ 2.09
Pdlim5-212ENSMUST00000200043 Ccdc136Q3TVA9 1136 aa28.06■■■□□ 2.08
Pdlim5-212ENSMUST00000200043 CftrP26361 1476 aa28.05■■■□□ 2.08
Pdlim5-212ENSMUST00000200043 Brd4Q9ESU6 1400 aaKnown RBP28.01■■■□□ 2.07
Pdlim5-212ENSMUST00000200043 Unc13aQ4KUS2 1712 aa27.99■■■□□ 2.07
Pdlim5-212ENSMUST00000200043 Phldb1Q6PDH0 1371 aaKnown RBP27.84■■■□□ 2.05
Pdlim5-212ENSMUST00000200043 Baz1bQ9Z277 1479 aa27.63■■■□□ 2.01
Pdlim5-212ENSMUST00000200043 Trim41Q5NCC3 630 aa27.56■■■□□ 2
Pdlim5-212ENSMUST00000200043 Ubl4bQ9CQ84 188 aa27.56■■■□□ 2
Pdlim5-212ENSMUST00000200043 Esf1Q3V1V3 845 aaKnown RBP27.48■■□□□ 1.99
Pdlim5-212ENSMUST00000200043 Mrc2Q64449 1479 aa27.4■■□□□ 1.98
Pdlim5-212ENSMUST00000200043 Rsf1E9PWW9 1441 aaKnown RBP27.24■■□□□ 1.95
Pdlim5-212ENSMUST00000200043 Lamc3Q9R0B6 1581 aa27.22■■□□□ 1.95
Pdlim5-212ENSMUST00000200043 Top2bQ64511 1612 aa27.21■■□□□ 1.95
Pdlim5-212ENSMUST00000200043 Kif15Q6P9L6 1387 aa27.19■■□□□ 1.94
Pdlim5-212ENSMUST00000200043 Golga3P55937 1487 aa27.16■■□□□ 1.94
Pdlim5-212ENSMUST00000200043 Cux2P70298 1426 aa27.11■■□□□ 1.93
Pdlim5-212ENSMUST00000200043 TnnQ80Z71 1560 aa27.04■■□□□ 1.92
Pdlim5-212ENSMUST00000200043 Cngb1E1AZ71 1325 aa27.02■■□□□ 1.92
Pdlim5-212ENSMUST00000200043 Kif21aQ9QXL2 1672 aa27■■□□□ 1.91
Pdlim5-212ENSMUST00000200043 Lrriq1Q0P5X1 1673 aa26.9■■□□□ 1.9
Pdlim5-212ENSMUST00000200043 Fmn1Q05860 1466 aa26.8■■□□□ 1.88
Pdlim5-212ENSMUST00000200043 Camsap1A2AHC3 1581 aa26.79■■□□□ 1.88
Pdlim5-212ENSMUST00000200043 Npm1Q61937 292 aaKnown RBP26.76■■□□□ 1.87
Pdlim5-212ENSMUST00000200043 Cep164Q5DU05 1446 aa26.75■■□□□ 1.87
Pdlim5-212ENSMUST00000200043 Ccdc18Q640L5 1455 aa26.73■■□□□ 1.87
Pdlim5-212ENSMUST00000200043 Il27Q8K3I6 234 aa26.66■■□□□ 1.86
Pdlim5-212ENSMUST00000200043 Dhx29Q6PGC1 1365 aaKnown RBP26.57■■□□□ 1.84
Pdlim5-212ENSMUST00000200043 Ccdc88bQ4QRL3 1481 aa26.55■■□□□ 1.84
Pdlim5-212ENSMUST00000200043 Crocc2F6XLV1 1638 aa26.54■■□□□ 1.84
Pdlim5-212ENSMUST00000200043 LrpprcQ6PB66 1392 aaKnown RBP26.54■■□□□ 1.84
Pdlim5-212ENSMUST00000200043 Urb2E9Q7L1 1524 aaKnown RBP26.5■■□□□ 1.83
Pdlim5-212ENSMUST00000200043 Eif4g3Q80XI3 1579 aaKnown RBP26.49■■□□□ 1.83
Pdlim5-212ENSMUST00000200043 Plb1Q3TTY0 1478 aa26.44■■□□□ 1.82
Pdlim5-212ENSMUST00000200043 PogzQ8BZH4 1409 aaKnown RBP26.44■■□□□ 1.82
Pdlim5-212ENSMUST00000200043 Top2aQ01320 1528 aaKnown RBP26.4■■□□□ 1.82
Pdlim5-212ENSMUST00000200043 Grin2bQ01097 1482 aa26.39■■□□□ 1.82
Pdlim5-212ENSMUST00000200043 Duox2A2AQ99 1517 aa26.33■■□□□ 1.81
Pdlim5-212ENSMUST00000200043 Chic1Q8CBW7 227 aa26.33■■□□□ 1.81
Pdlim5-212ENSMUST00000200043 Samd9lQ69Z37 1561 aa26.23■■□□□ 1.79
Pdlim5-212ENSMUST00000200043 Ift140E9PY46 1464 aa26.21■■□□□ 1.79
Pdlim5-212ENSMUST00000200043 Setd1bQ8CFT2 1985 aa26.18■■□□□ 1.78
Pdlim5-212ENSMUST00000200043 Rusc2Q80U22 1514 aa26.13■■□□□ 1.77
Pdlim5-212ENSMUST00000200043 NrkQ9R0G8 1455 aa26.13■■□□□ 1.77
Pdlim5-212ENSMUST00000200043 Efcab5A0JP43 1406 aa26.12■■□□□ 1.77
Pdlim5-212ENSMUST00000200043 Disp1Q3TDN0 1521 aa26.08■■□□□ 1.77
Pdlim5-212ENSMUST00000200043 Pbrm1Q8BSQ9 1634 aaKnown RBP26.07■■□□□ 1.76
Pdlim5-212ENSMUST00000200043 PtprkP35822 1457 aa26.07■■□□□ 1.76
Pdlim5-212ENSMUST00000200043 Shroom4Q1W617 1475 aa26.06■■□□□ 1.76
Pdlim5-212ENSMUST00000200043 Rad54l2Q99NG0 1466 aa25.99■■□□□ 1.75
Pdlim5-212ENSMUST00000200043 Nup160Q9Z0W3 1402 aaKnown RBP25.96■■□□□ 1.75
Pdlim5-212ENSMUST00000200043 HrcG5E8J6 738 aa25.94■■□□□ 1.74
Pdlim5-212ENSMUST00000200043 Magi3Q9EQJ9 1476 aa25.93■■□□□ 1.74
Pdlim5-212ENSMUST00000200043 Shroom2A2ALU4 1481 aa25.9■■□□□ 1.74
Pdlim5-212ENSMUST00000200043 Grin2aP35436 1464 aa25.89■■□□□ 1.74
Pdlim5-212ENSMUST00000200043 SynmQ70IV5 1561 aa25.89■■□□□ 1.73
Pdlim5-212ENSMUST00000200043 Cc2d2bA0A286YDU8 1405 aa25.85■■□□□ 1.73
Pdlim5-212ENSMUST00000200043 Pla2r1Q62028 1487 aa25.81■■□□□ 1.72
Pdlim5-212ENSMUST00000200043 Gpatch8A2A6A1 1505 aa25.8■■□□□ 1.72
Pdlim5-212ENSMUST00000200043 AqrQ8CFQ3 1481 aaKnown RBP25.76■■□□□ 1.71
Pdlim5-212ENSMUST00000200043 Gab3Q8BSM5 595 aa25.73■■□□□ 1.71
Pdlim5-212ENSMUST00000200043 Npm2Q80W85 207 aa25.71■■□□□ 1.71
Pdlim5-212ENSMUST00000200043 Mroh2bQ7M6Y6 1581 aa25.71■■□□□ 1.71
Pdlim5-212ENSMUST00000200043 Zeb1Q64318 1117 aa25.7■■□□□ 1.71
Pdlim5-212ENSMUST00000200043 Rapgef2Q8CHG7 1496 aa25.7■■□□□ 1.71
Pdlim5-212ENSMUST00000200043 Pabpn1Q8CCS6 302 aaKnown RBP25.61■■□□□ 1.69
Pdlim5-212ENSMUST00000200043 Eif4g1Q6NZJ6 1600 aaKnown RBP25.61■■□□□ 1.69
Pdlim5-212ENSMUST00000200043 Abca16E9PWJ7 1678 aa25.6■■□□□ 1.69
Pdlim5-212ENSMUST00000200043 Arhgap35Q91YM2 1499 aa25.6■■□□□ 1.69
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms