RNA–Protein interactions for RNA: ENSMUST00000162057.7

Cldnd1-204, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Cldnd1, Length 1,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-204ENSMUST00000162057 Prm1P02319 51 aa12.38□□□□□ -0.43
Cldnd1-204ENSMUST00000162057 Gm5767A0A0J9YTU8 78 aa12.36□□□□□ -0.43
Cldnd1-204ENSMUST00000162057 Cypt15B1AXS0 87 aa12.34□□□□□ -0.43
Cldnd1-204ENSMUST00000162057 Defa21Q8C1P2 93 aa12.34□□□□□ -0.43
Cldnd1-204ENSMUST00000162057 Reg3aO09037 175 aa12.31□□□□□ -0.44
Cldnd1-204ENSMUST00000162057 Ubl5Q9EPV8 73 aa12.31□□□□□ -0.44
Cldnd1-204ENSMUST00000162057 MplkipQ9D011 178 aa12.3□□□□□ -0.44
Cldnd1-204ENSMUST00000162057 Gm7735D3YX18 52 aa12.29□□□□□ -0.44
Cldnd1-204ENSMUST00000162057 Gtf2h5Q8K2X8 71 aa12.27□□□□□ -0.45
Cldnd1-204ENSMUST00000162057 Pxt1Q8K459 51 aa12.27□□□□□ -0.45
Cldnd1-204ENSMUST00000162057 Gm11939A2A592 99 aa12.26□□□□□ -0.45
Cldnd1-204ENSMUST00000162057 Gm9789Q8BIG3 52 aa12.23□□□□□ -0.45
Cldnd1-204ENSMUST00000162057 Lyrm7Q9DA03 104 aa12.23□□□□□ -0.45
Cldnd1-204ENSMUST00000162057 Ush2AQ2QI47 5193 aa12.22□□□□□ -0.45
Cldnd1-204ENSMUST00000162057 Gm26620Q9CY65 116 aa12.2□□□□□ -0.46
Cldnd1-204ENSMUST00000162057 Igkv3-3A0A140T8Q0 119 aa12.16□□□□□ -0.46
Cldnd1-204ENSMUST00000162057 Cdip1Q9DB75 208 aa12.14□□□□□ -0.47
Cldnd1-204ENSMUST00000162057 Igkv8-19A0A0G2JFN8 121 aa12.13□□□□□ -0.47
Cldnd1-204ENSMUST00000162057 Gm9821Q8K076 103 aa12.11□□□□□ -0.47
Cldnd1-204ENSMUST00000162057 BikO70337 150 aa12.06□□□□□ -0.48
Cldnd1-204ENSMUST00000162057 Tmem254aP0DN89 123 aa12.06□□□□□ -0.48
Cldnd1-204ENSMUST00000162057 Tmem254bP0DN90 123 aa12.06□□□□□ -0.48
Cldnd1-204ENSMUST00000162057 Tmem254cP0DN91 123 aa12.06□□□□□ -0.48
Cldnd1-204ENSMUST00000162057 Trav3-1Q5R1I8 114 aa12.06□□□□□ -0.48
Cldnd1-204ENSMUST00000162057 Krtap15-1Q9QZU5 150 aa12.04□□□□□ -0.48
Cldnd1-204ENSMUST00000162057 Bud31Q6PGH1 103 aa12.03□□□□□ -0.48
Cldnd1-204ENSMUST00000162057 Hmcn2A2AJ76 5100 aa12.01□□□□□ -0.49
Cldnd1-204ENSMUST00000162057 Defb13Q8R2I4 64 aa11.99□□□□□ -0.49
Cldnd1-204ENSMUST00000162057 Prr15lQ8JZM2 100 aa11.98□□□□□ -0.49
Cldnd1-204ENSMUST00000162057 Gm10267M0QWD8 85 aa11.96□□□□□ -0.5
Cldnd1-204ENSMUST00000162057 4932415D10RikA0A1W2P6U8 4986 aa11.95□□□□□ -0.5
Cldnd1-204ENSMUST00000162057 Scgb1b2O35176 93 aa11.93□□□□□ -0.5
Cldnd1-204ENSMUST00000162057 Ubr4A2AN08 5180 aa11.93□□□□□ -0.5
Cldnd1-204ENSMUST00000162057 Fam240bJ3QMB3 78 aa11.91□□□□□ -0.5
Cldnd1-204ENSMUST00000162057 Rpl37Q9D823 97 aa11.91□□□□□ -0.5
Cldnd1-204ENSMUST00000162057 Hist1h4aP62806 103 aaKnown RBP11.9□□□□□ -0.5
Cldnd1-204ENSMUST00000162057 Sec61bQ9CQS8 96 aaKnown RBP11.85□□□□□ -0.51
Cldnd1-204ENSMUST00000162057 Gm45213A0A0U1RNZ6 101 aa11.83□□□□□ -0.52
Cldnd1-204ENSMUST00000162057 A0A286YE49 62 aa11.83□□□□□ -0.52
Cldnd1-204ENSMUST00000162057 Samd13D3YUG0 102 aa11.8□□□□□ -0.52
Cldnd1-204ENSMUST00000162057 2310057N15RikQ9D6T8 200 aa11.76□□□□□ -0.53
Cldnd1-204ENSMUST00000162057 Spink8Q09TK9 105 aa11.75□□□□□ -0.53
Cldnd1-204ENSMUST00000162057 7530416G11RikJ3QJX6 159 aa11.73□□□□□ -0.53
Cldnd1-204ENSMUST00000162057 BatfO35284 125 aa11.73□□□□□ -0.53
Cldnd1-204ENSMUST00000162057 Naa38Q9D2U5 125 aa11.7□□□□□ -0.54
Cldnd1-204ENSMUST00000162057 Krtap3-2Q9D638 99 aa11.69□□□□□ -0.54
Cldnd1-204ENSMUST00000162057 Krtap3-3Q9D7P0 99 aa11.69□□□□□ -0.54
Cldnd1-204ENSMUST00000162057 2310034C09RikQ9D746 214 aa11.66□□□□□ -0.54
Cldnd1-204ENSMUST00000162057 Fam229bQ8CF36 80 aa11.65□□□□□ -0.54
Cldnd1-204ENSMUST00000162057 Apoc4Q61268 124 aa11.65□□□□□ -0.55
Cldnd1-204ENSMUST00000162057 Rnase13Q5GAM7 153 aa11.64□□□□□ -0.55
Cldnd1-204ENSMUST00000162057 Ndufc1Q9CQY9 76 aa11.6□□□□□ -0.55
Cldnd1-204ENSMUST00000162057 1700074P13RikQ9D9G7 251 aa11.6□□□□□ -0.55
Cldnd1-204ENSMUST00000162057 Krtap1-3A2A588 173 aa11.54□□□□□ -0.56
Cldnd1-204ENSMUST00000162057 Atp5eP56382 52 aa11.51□□□□□ -0.57
Cldnd1-204ENSMUST00000162057 Gm4491E0CX42 125 aa11.5□□□□□ -0.57
Cldnd1-204ENSMUST00000162057 Crct1Q6PAI5 102 aa11.48□□□□□ -0.57
Cldnd1-204ENSMUST00000162057 Gm28539A0A087WSL9 92 aa11.38□□□□□ -0.59
Cldnd1-204ENSMUST00000162057 Gm17416Q30KP4 66 aa11.36□□□□□ -0.59
Cldnd1-204ENSMUST00000162057 ZanO88799 5376 aa11.36□□□□□ -0.59
Cldnd1-204ENSMUST00000162057 Q8BGJ3 129 aa11.34□□□□□ -0.59
Cldnd1-204ENSMUST00000162057 Gm10999F6Q4M4 69 aa11.32□□□□□ -0.6
Cldnd1-204ENSMUST00000162057 4930518I15RikQ3V2W7 57 aa11.32□□□□□ -0.6
Cldnd1-204ENSMUST00000162057 Krtap16-3Q8C1I6 86 aa11.32□□□□□ -0.6
Cldnd1-204ENSMUST00000162057 Krtap19-1Q925H2 87 aa11.27□□□□□ -0.61
Cldnd1-204ENSMUST00000162057 Krtap19-3Q925H6 87 aa11.25□□□□□ -0.61
Cldnd1-204ENSMUST00000162057 9230102O04RikA2ASX7 82 aa11.25□□□□□ -0.61
Cldnd1-204ENSMUST00000162057 Atox1O08997 68 aaKnown RBP11.25□□□□□ -0.61
Cldnd1-204ENSMUST00000162057 Defb38Q7TNV7 63 aa11.25□□□□□ -0.61
Cldnd1-204ENSMUST00000162057 Fam229aB2KGE5 128 aa11.24□□□□□ -0.61
Cldnd1-204ENSMUST00000162057 Anapc13Q8R034 74 aa11.23□□□□□ -0.61
Cldnd1-204ENSMUST00000162057 Fat4Q2PZL6 4981 aa11.21□□□□□ -0.61
Cldnd1-204ENSMUST00000162057 Serp2Q6TAW2 65 aa11.2□□□□□ -0.62
Cldnd1-204ENSMUST00000162057 LorP18165 486 aa11.19□□□□□ -0.62
Cldnd1-204ENSMUST00000162057 Chtf8P0CG14 533 aa11.17□□□□□ -0.62
Cldnd1-204ENSMUST00000162057 Gm10318A0A1W2P728 225 aa11.13□□□□□ -0.63
Cldnd1-204ENSMUST00000162057 Coa6Q8BGD8 79 aa11.13□□□□□ -0.63
Cldnd1-204ENSMUST00000162057 B230307C23RikQ8BLB2 64 aa11.13□□□□□ -0.63
Cldnd1-204ENSMUST00000162057 4930507D05RikQ8C9C9 103 aa11.12□□□□□ -0.63
Cldnd1-204ENSMUST00000162057 Gm21798J3QNU5 87 aa11.11□□□□□ -0.63
Cldnd1-204ENSMUST00000162057 Spint4Q9D263 159 aa11.11□□□□□ -0.63
Cldnd1-204ENSMUST00000162057 1700042G07RikB1AUF7 90 aa11.09□□□□□ -0.63
Cldnd1-204ENSMUST00000162057 Gm10160F6Y577 67 aa11.09□□□□□ -0.63
Cldnd1-204ENSMUST00000162057 2310079G19RikQ9D6L6 185 aa11.08□□□□□ -0.64
Cldnd1-204ENSMUST00000162057 Rnf213E9Q555 5152 aaKnown RBP11.07□□□□□ -0.64
Cldnd1-204ENSMUST00000162057 Gm19402J3QJV4 266 aa11.04□□□□□ -0.64
Cldnd1-204ENSMUST00000162057 Krtap13-1Q8K198 168 aa10.99□□□□□ -0.65
Cldnd1-204ENSMUST00000162057 2210017I01RikA0A0A6YVV1 95 aa10.96□□□□□ -0.65
Cldnd1-204ENSMUST00000162057 Krtap1-4Q3V2D6 188 aa10.96□□□□□ -0.65
Cldnd1-204ENSMUST00000162057 Gm10643Q3URG9 111 aa10.91□□□□□ -0.66
Cldnd1-204ENSMUST00000162057 Gm10061D3Z714 54 aa10.84□□□□□ -0.67
Cldnd1-204ENSMUST00000162057 Krtap1-5A2A590 122 aa10.83□□□□□ -0.68
Cldnd1-204ENSMUST00000162057 Coa5Q99M07 74 aa10.79□□□□□ -0.68
Cldnd1-204ENSMUST00000162057 Defb1P56386 69 aa10.76□□□□□ -0.69
Cldnd1-204ENSMUST00000162057 Smlr1J3QMJ4 66 aa10.64□□□□□ -0.71
Cldnd1-204ENSMUST00000162057 SptssbQ925E8 76 aa10.64□□□□□ -0.71
Cldnd1-204ENSMUST00000162057 Cox6b2Q80ZN9 88 aa10.63□□□□□ -0.71
Cldnd1-204ENSMUST00000162057 Krtap3-1A2A591 98 aa10.63□□□□□ -0.71
Cldnd1-204ENSMUST00000162057 SspoQ8CG65 4998 aa10.62□□□□□ -0.71
Cldnd1-204ENSMUST00000162057 Gm17606F6ZL36 78 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms