RNA–Protein interactions for RNA: ENSMUST00000162057.7

Cldnd1-204, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Cldnd1, Length 1,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-204ENSMUST00000162057 Gm35339A0A140LHH9 1649 aa49.01■■■■■ 5.44
Cldnd1-204ENSMUST00000162057 NischQ80TM9 1593 aa48.52■■■■■ 5.36
Cldnd1-204ENSMUST00000162057 Abcc9P70170 1546 aa47.05■■■■■ 5.12
Cldnd1-204ENSMUST00000162057 Abcc8B2RUS7 1588 aa46.71■■■■■ 5.07
Cldnd1-204ENSMUST00000162057 ScribQ80U72 1612 aa44.73■■■■■ 4.75
Cldnd1-204ENSMUST00000162057 Kdm5dQ62240 1548 aa43.37■■■■■ 4.53
Cldnd1-204ENSMUST00000162057 NacadQ5SWP3 1504 aa43.37■■■■■ 4.53
Cldnd1-204ENSMUST00000162057 Dcaf1Q80TR8 1506 aa43.22■■■■■ 4.51
Cldnd1-204ENSMUST00000162057 Sycp2Q9CUU3 1500 aa42.48■■■■■ 4.39
Cldnd1-204ENSMUST00000162057 Rhox8Q6VSS7 320 aa42.4■■■■■ 4.38
Cldnd1-204ENSMUST00000162057 Rb1cc1Q9ESK9 1588 aa42.39■■■■■ 4.38
Cldnd1-204ENSMUST00000162057 Ccdc180J3QNE4 1664 aa42.02■■■■■ 4.32
Cldnd1-204ENSMUST00000162057 Baz1aO88379 1555 aa41.81■■■■■ 4.28
Cldnd1-204ENSMUST00000162057 BicraF8VPZ9 1578 aa41.8■■■■■ 4.28
Cldnd1-204ENSMUST00000162057 Crybg2B7ZCC2 1516 aa41.53■■■■■ 4.24
Cldnd1-204ENSMUST00000162057 Zcchc6Q5BLK4 1491 aaKnown RBP41.03■■■■■ 4.16
Cldnd1-204ENSMUST00000162057 Rtl1Q7M732 1744 aa40.74■■■■■ 4.11
Cldnd1-204ENSMUST00000162057 Smarca2Q6DIC0 1577 aa40.66■■■■■ 4.1
Cldnd1-204ENSMUST00000162057 Pds5bQ4VA53 1446 aaKnown RBP40.48■■■■■ 4.07
Cldnd1-204ENSMUST00000162057 Atad2bE9Q166 1460 aaKnown RBP40.23■■■■■ 4.03
Cldnd1-204ENSMUST00000162057 Smarca4Q3TKT4 1613 aaKnown RBP40.21■■■■■ 4.03
Cldnd1-204ENSMUST00000162057 Cecr2E9Q2Z1 1453 aa40.17■■■■■ 4.02
Cldnd1-204ENSMUST00000162057 Thoc2B1AZI6 1594 aaKnown RBP39.98■■■■□ 3.99
Cldnd1-204ENSMUST00000162057 Dnajc5bQ9CQ94 199 aa39.96■■■■□ 3.99
Cldnd1-204ENSMUST00000162057 Iqgap2Q3UQ44 1575 aa39.9■■■■□ 3.98
Cldnd1-204ENSMUST00000162057 Ercc6F8VPZ5 1481 aa39.69■■■■□ 3.94
Cldnd1-204ENSMUST00000162057 Ccdc136Q3TVA9 1136 aa39.54■■■■□ 3.92
Cldnd1-204ENSMUST00000162057 Brd4Q9ESU6 1400 aaKnown RBP39.51■■■■□ 3.92
Cldnd1-204ENSMUST00000162057 Cttnbp2B9EJA2 1648 aa39.47■■■■□ 3.91
Cldnd1-204ENSMUST00000162057 Wdr62Q3U3T8 1523 aa39.44■■■■□ 3.91
Cldnd1-204ENSMUST00000162057 Synj1Q8CHC4 1574 aa39.44■■■■□ 3.9
Cldnd1-204ENSMUST00000162057 CftrP26361 1476 aa39.41■■■■□ 3.9
Cldnd1-204ENSMUST00000162057 Cc2d2aQ8CFW7 1633 aa39.35■■■■□ 3.89
Cldnd1-204ENSMUST00000162057 Frmpd1A2AKB4 1549 aa39.33■■■■□ 3.89
Cldnd1-204ENSMUST00000162057 Fam135aQ6NS59 1506 aa39.19■■■■□ 3.86
Cldnd1-204ENSMUST00000162057 Trim41Q5NCC3 630 aa39.02■■■■□ 3.84
Cldnd1-204ENSMUST00000162057 Unc13aQ4KUS2 1712 aa38.99■■■■□ 3.83
Cldnd1-204ENSMUST00000162057 Phldb1Q6PDH0 1371 aaKnown RBP38.95■■■■□ 3.83
Cldnd1-204ENSMUST00000162057 Baz1bQ9Z277 1479 aa38.78■■■■□ 3.8
Cldnd1-204ENSMUST00000162057 Esf1Q3V1V3 845 aaKnown RBP38.68■■■■□ 3.78
Cldnd1-204ENSMUST00000162057 Ubl4bQ9CQ84 188 aa38.48■■■■□ 3.75
Cldnd1-204ENSMUST00000162057 Golga3P55937 1487 aa38.33■■■■□ 3.73
Cldnd1-204ENSMUST00000162057 Top2bQ64511 1612 aa38.3■■■■□ 3.72
Cldnd1-204ENSMUST00000162057 Rsf1E9PWW9 1441 aaKnown RBP38.26■■■■□ 3.71
Cldnd1-204ENSMUST00000162057 Mrc2Q64449 1479 aa38.24■■■■□ 3.71
Cldnd1-204ENSMUST00000162057 Lamc3Q9R0B6 1581 aa38.18■■■■□ 3.7
Cldnd1-204ENSMUST00000162057 Kif15Q6P9L6 1387 aa38.11■■■■□ 3.69
Cldnd1-204ENSMUST00000162057 Cngb1E1AZ71 1325 aa38.09■■■■□ 3.69
Cldnd1-204ENSMUST00000162057 TnnQ80Z71 1560 aa37.98■■■■□ 3.67
Cldnd1-204ENSMUST00000162057 Cux2P70298 1426 aa37.95■■■■□ 3.67
Cldnd1-204ENSMUST00000162057 Fmn1Q05860 1466 aa37.8■■■■□ 3.64
Cldnd1-204ENSMUST00000162057 Kif21aQ9QXL2 1672 aa37.63■■■■□ 3.61
Cldnd1-204ENSMUST00000162057 Ccdc18Q640L5 1455 aa37.59■■■■□ 3.61
Cldnd1-204ENSMUST00000162057 Camsap1A2AHC3 1581 aa37.58■■■■□ 3.61
Cldnd1-204ENSMUST00000162057 Npm1Q61937 292 aaKnown RBP37.55■■■■□ 3.6
Cldnd1-204ENSMUST00000162057 Cep164Q5DU05 1446 aa37.54■■■■□ 3.6
Cldnd1-204ENSMUST00000162057 Lrriq1Q0P5X1 1673 aa37.43■■■■□ 3.58
Cldnd1-204ENSMUST00000162057 Ccdc88bQ4QRL3 1481 aa37.41■■■■□ 3.58
Cldnd1-204ENSMUST00000162057 Il27Q8K3I6 234 aa37.34■■■■□ 3.57
Cldnd1-204ENSMUST00000162057 LrpprcQ6PB66 1392 aaKnown RBP37.24■■■■□ 3.55
Cldnd1-204ENSMUST00000162057 Top2aQ01320 1528 aaKnown RBP37.22■■■■□ 3.55
Cldnd1-204ENSMUST00000162057 Dhx29Q6PGC1 1365 aaKnown RBP37.2■■■■□ 3.55
Cldnd1-204ENSMUST00000162057 Crocc2F6XLV1 1638 aa37.14■■■■□ 3.54
Cldnd1-204ENSMUST00000162057 Chic1Q8CBW7 227 aa37.13■■■■□ 3.53
Cldnd1-204ENSMUST00000162057 PogzQ8BZH4 1409 aaKnown RBP37.1■■■■□ 3.53
Cldnd1-204ENSMUST00000162057 Grin2bQ01097 1482 aa37.07■■■■□ 3.53
Cldnd1-204ENSMUST00000162057 HrcG5E8J6 738 aa37.07■■■■□ 3.53
Cldnd1-204ENSMUST00000162057 Urb2E9Q7L1 1524 aaKnown RBP36.99■■■■□ 3.51
Cldnd1-204ENSMUST00000162057 Plb1Q3TTY0 1478 aa36.94■■■■□ 3.5
Cldnd1-204ENSMUST00000162057 Duox2A2AQ99 1517 aa36.94■■■■□ 3.5
Cldnd1-204ENSMUST00000162057 Eif4g3Q80XI3 1579 aaKnown RBP36.92■■■■□ 3.5
Cldnd1-204ENSMUST00000162057 NrkQ9R0G8 1455 aa36.83■■■■□ 3.49
Cldnd1-204ENSMUST00000162057 Efcab5A0JP43 1406 aa36.77■■■■□ 3.48
Cldnd1-204ENSMUST00000162057 Samd9lQ69Z37 1561 aa36.72■■■■□ 3.47
Cldnd1-204ENSMUST00000162057 Ift140E9PY46 1464 aa36.71■■■■□ 3.47
Cldnd1-204ENSMUST00000162057 Shroom4Q1W617 1475 aa36.7■■■■□ 3.47
Cldnd1-204ENSMUST00000162057 PtprkP35822 1457 aa36.6■■■■□ 3.45
Cldnd1-204ENSMUST00000162057 Pbrm1Q8BSQ9 1634 aaKnown RBP36.55■■■■□ 3.44
Cldnd1-204ENSMUST00000162057 Disp1Q3TDN0 1521 aa36.5■■■■□ 3.43
Cldnd1-204ENSMUST00000162057 Rusc2Q80U22 1514 aa36.5■■■■□ 3.43
Cldnd1-204ENSMUST00000162057 Setd1bQ8CFT2 1985 aa36.47■■■■□ 3.43
Cldnd1-204ENSMUST00000162057 Rad54l2Q99NG0 1466 aa36.37■■■■□ 3.41
Cldnd1-204ENSMUST00000162057 Nup160Q9Z0W3 1402 aaKnown RBP36.36■■■■□ 3.41
Cldnd1-204ENSMUST00000162057 SynmQ70IV5 1561 aa36.36■■■■□ 3.41
Cldnd1-204ENSMUST00000162057 Gab3Q8BSM5 595 aa36.33■■■■□ 3.41
Cldnd1-204ENSMUST00000162057 Magi3Q9EQJ9 1476 aa36.31■■■■□ 3.4
Cldnd1-204ENSMUST00000162057 Npm2Q80W85 207 aa36.3■■■■□ 3.4
Cldnd1-204ENSMUST00000162057 Rapgef2Q8CHG7 1496 aa36.3■■■■□ 3.4
Cldnd1-204ENSMUST00000162057 Grin2aP35436 1464 aa36.29■■■■□ 3.4
Cldnd1-204ENSMUST00000162057 Cc2d2bA0A286YDU8 1405 aa36.26■■■■□ 3.39
Cldnd1-204ENSMUST00000162057 Gpatch8A2A6A1 1505 aa36.23■■■■□ 3.39
Cldnd1-204ENSMUST00000162057 Shroom2A2ALU4 1481 aa36.21■■■■□ 3.39
Cldnd1-204ENSMUST00000162057 Mroh2bQ7M6Y6 1581 aa36.21■■■■□ 3.39
Cldnd1-204ENSMUST00000162057 Zeb1Q64318 1117 aa36.18■■■■□ 3.38
Cldnd1-204ENSMUST00000162057 Pla2r1Q62028 1487 aa36.16■■■■□ 3.38
Cldnd1-204ENSMUST00000162057 Eif4g1Q6NZJ6 1600 aaKnown RBP36.12■■■■□ 3.37
Cldnd1-204ENSMUST00000162057 Map3k1P53349 1493 aa36.09■■■■□ 3.37
Cldnd1-204ENSMUST00000162057 AqrQ8CFQ3 1481 aaKnown RBP36.08■■■■□ 3.37
Cldnd1-204ENSMUST00000162057 Arhgap35Q91YM2 1499 aa36.08■■■■□ 3.37
Cldnd1-204ENSMUST00000162057 Cep162Q6ZQ06 1403 aa36.03■■■■□ 3.36
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms