RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Pcp4l1Q6W8Q3 68 aa7.69□□□□□ -1.18
Ercc1-203ENSMUST00000160369 Cypt15B1AXS0 87 aa7.68□□□□□ -1.18
Ercc1-203ENSMUST00000160369 Xcl1P47993 114 aa7.68□□□□□ -1.18
Ercc1-203ENSMUST00000160369 Mtatp8P03930 67 aa7.67□□□□□ -1.18
Ercc1-203ENSMUST00000160369 C130032M10RikQ8C888 123 aa7.67□□□□□ -1.18
Ercc1-203ENSMUST00000160369 Mrpl34Q99N91 92 aa7.66□□□□□ -1.18
Ercc1-203ENSMUST00000160369 Gm26620Q9CY65 116 aa7.65□□□□□ -1.18
Ercc1-203ENSMUST00000160369 Gm11939A2A592 99 aa7.64□□□□□ -1.19
Ercc1-203ENSMUST00000160369 Gm37013Q8K491 104 aa7.64□□□□□ -1.19
Ercc1-203ENSMUST00000160369 Ormdl1Q921I0 153 aa7.64□□□□□ -1.19
Ercc1-203ENSMUST00000160369 Hmcn2A2AJ76 5100 aa7.62□□□□□ -1.19
Ercc1-203ENSMUST00000160369 Defa21Q8C1P2 93 aa7.62□□□□□ -1.19
Ercc1-203ENSMUST00000160369 4932415D10RikA0A1W2P6U8 4986 aa7.58□□□□□ -1.2
Ercc1-203ENSMUST00000160369 Igkv3-3A0A140T8Q0 119 aa7.58□□□□□ -1.2
Ercc1-203ENSMUST00000160369 Ubr4A2AN08 5180 aa7.58□□□□□ -1.2
Ercc1-203ENSMUST00000160369 Sec61bQ9CQS8 96 aaKnown RBP7.56□□□□□ -1.2
Ercc1-203ENSMUST00000160369 Krtap15-1Q9QZU5 150 aa7.56□□□□□ -1.2
Ercc1-203ENSMUST00000160369 Reg3aO09037 175 aa7.54□□□□□ -1.2
Ercc1-203ENSMUST00000160369 BikO70337 150 aa7.54□□□□□ -1.2
Ercc1-203ENSMUST00000160369 Lyrm7Q9DA03 104 aa7.53□□□□□ -1.2
Ercc1-203ENSMUST00000160369 Ubl5Q9EPV8 73 aa7.52□□□□□ -1.21
Ercc1-203ENSMUST00000160369 Scgb1b2O35176 93 aa7.49□□□□□ -1.21
Ercc1-203ENSMUST00000160369 MplkipQ9D011 178 aa7.48□□□□□ -1.21
Ercc1-203ENSMUST00000160369 Rpl37Q9D823 97 aa7.48□□□□□ -1.21
Ercc1-203ENSMUST00000160369 Igkv8-19A0A0G2JFN8 121 aa7.45□□□□□ -1.22
Ercc1-203ENSMUST00000160369 Defb13Q8R2I4 64 aa7.45□□□□□ -1.22
Ercc1-203ENSMUST00000160369 2310057N15RikQ9D6T8 200 aa7.42□□□□□ -1.22
Ercc1-203ENSMUST00000160369 Trav3-1Q5R1I8 114 aa7.39□□□□□ -1.23
Ercc1-203ENSMUST00000160369 Gm10267M0QWD8 85 aa7.37□□□□□ -1.23
Ercc1-203ENSMUST00000160369 Gtf2h5Q8K2X8 71 aa7.37□□□□□ -1.23
Ercc1-203ENSMUST00000160369 7530416G11RikJ3QJX6 159 aa7.35□□□□□ -1.23
Ercc1-203ENSMUST00000160369 Apoc4Q61268 124 aa7.35□□□□□ -1.23
Ercc1-203ENSMUST00000160369 Krtap1-3A2A588 173 aa7.32□□□□□ -1.24
Ercc1-203ENSMUST00000160369 Tmem254aP0DN89 123 aa7.32□□□□□ -1.24
Ercc1-203ENSMUST00000160369 Tmem254bP0DN90 123 aa7.32□□□□□ -1.24
Ercc1-203ENSMUST00000160369 Tmem254cP0DN91 123 aa7.32□□□□□ -1.24
Ercc1-203ENSMUST00000160369 Rnase13Q5GAM7 153 aa7.32□□□□□ -1.24
Ercc1-203ENSMUST00000160369 Bud31Q6PGH1 103 aa7.32□□□□□ -1.24
Ercc1-203ENSMUST00000160369 2310034C09RikQ9D746 214 aa7.32□□□□□ -1.24
Ercc1-203ENSMUST00000160369 Prr15lQ8JZM2 100 aa7.29□□□□□ -1.24
Ercc1-203ENSMUST00000160369 Pxt1Q8K459 51 aa7.28□□□□□ -1.24
Ercc1-203ENSMUST00000160369 A0A286YE49 62 aa7.24□□□□□ -1.25
Ercc1-203ENSMUST00000160369 Samd13D3YUG0 102 aa7.24□□□□□ -1.25
Ercc1-203ENSMUST00000160369 ZanO88799 5376 aa7.23□□□□□ -1.25
Ercc1-203ENSMUST00000160369 Crct1Q6PAI5 102 aa7.22□□□□□ -1.25
Ercc1-203ENSMUST00000160369 Hist1h4aP62806 103 aaKnown RBP7.21□□□□□ -1.26
Ercc1-203ENSMUST00000160369 Krtap3-2Q9D638 99 aa7.2□□□□□ -1.26
Ercc1-203ENSMUST00000160369 Krtap3-3Q9D7P0 99 aa7.2□□□□□ -1.26
Ercc1-203ENSMUST00000160369 Gm28539A0A087WSL9 92 aa7.19□□□□□ -1.26
Ercc1-203ENSMUST00000160369 Naa38Q9D2U5 125 aa7.18□□□□□ -1.26
Ercc1-203ENSMUST00000160369 Fam229aB2KGE5 128 aa7.17□□□□□ -1.26
Ercc1-203ENSMUST00000160369 Spink8Q09TK9 105 aa7.14□□□□□ -1.27
Ercc1-203ENSMUST00000160369 Gm4491E0CX42 125 aa7.13□□□□□ -1.27
Ercc1-203ENSMUST00000160369 Gm17416Q30KP4 66 aa7.13□□□□□ -1.27
Ercc1-203ENSMUST00000160369 Fat4Q2PZL6 4981 aa7.12□□□□□ -1.27
Ercc1-203ENSMUST00000160369 LorP18165 486 aa7.12□□□□□ -1.27
Ercc1-203ENSMUST00000160369 Krtap16-3Q8C1I6 86 aa7.11□□□□□ -1.27
Ercc1-203ENSMUST00000160369 1700042G07RikB1AUF7 90 aa7.09□□□□□ -1.27
Ercc1-203ENSMUST00000160369 Krtap19-3Q925H6 87 aa7.09□□□□□ -1.27
Ercc1-203ENSMUST00000160369 Krtap19-1Q925H2 87 aa7.08□□□□□ -1.28
Ercc1-203ENSMUST00000160369 Rnf213E9Q555 5152 aaKnown RBP7.07□□□□□ -1.28
Ercc1-203ENSMUST00000160369 9230102O04RikA2ASX7 82 aa7.06□□□□□ -1.28
Ercc1-203ENSMUST00000160369 1700074P13RikQ9D9G7 251 aa7.06□□□□□ -1.28
Ercc1-203ENSMUST00000160369 Fam240bJ3QMB3 78 aa7.04□□□□□ -1.28
Ercc1-203ENSMUST00000160369 Ndufc1Q9CQY9 76 aa7.04□□□□□ -1.28
Ercc1-203ENSMUST00000160369 Chtf8P0CG14 533 aa7.03□□□□□ -1.28
Ercc1-203ENSMUST00000160369 Q8BGJ3 129 aa6.99□□□□□ -1.29
Ercc1-203ENSMUST00000160369 Gm19402J3QJV4 266 aa6.98□□□□□ -1.29
Ercc1-203ENSMUST00000160369 Fam229bQ8CF36 80 aa6.98□□□□□ -1.29
Ercc1-203ENSMUST00000160369 Gm10999F6Q4M4 69 aa6.97□□□□□ -1.29
Ercc1-203ENSMUST00000160369 Gm10318A0A1W2P728 225 aa6.96□□□□□ -1.3
Ercc1-203ENSMUST00000160369 Krtap1-4Q3V2D6 188 aa6.96□□□□□ -1.3
Ercc1-203ENSMUST00000160369 Gm45213A0A0U1RNZ6 101 aa6.94□□□□□ -1.3
Ercc1-203ENSMUST00000160369 BatfO35284 125 aa6.94□□□□□ -1.3
Ercc1-203ENSMUST00000160369 4930507D05RikQ8C9C9 103 aa6.9□□□□□ -1.3
Ercc1-203ENSMUST00000160369 Gm10061D3Z714 54 aa6.89□□□□□ -1.31
Ercc1-203ENSMUST00000160369 Atp5eP56382 52 aa6.87□□□□□ -1.31
Ercc1-203ENSMUST00000160369 Krtap13-1Q8K198 168 aa6.86□□□□□ -1.31
Ercc1-203ENSMUST00000160369 2210017I01RikA0A0A6YVV1 95 aa6.85□□□□□ -1.31
Ercc1-203ENSMUST00000160369 Defb38Q7TNV7 63 aa6.85□□□□□ -1.31
Ercc1-203ENSMUST00000160369 Atox1O08997 68 aaKnown RBP6.84□□□□□ -1.31
Ercc1-203ENSMUST00000160369 Krtap1-5A2A590 122 aa6.77□□□□□ -1.33
Ercc1-203ENSMUST00000160369 Gm21798J3QNU5 87 aa6.77□□□□□ -1.33
Ercc1-203ENSMUST00000160369 4930518I15RikQ3V2W7 57 aa6.77□□□□□ -1.33
Ercc1-203ENSMUST00000160369 2310079G19RikQ9D6L6 185 aa6.77□□□□□ -1.33
Ercc1-203ENSMUST00000160369 Gm10160F6Y577 67 aa6.76□□□□□ -1.33
Ercc1-203ENSMUST00000160369 Spint4Q9D263 159 aa6.74□□□□□ -1.33
Ercc1-203ENSMUST00000160369 Coa6Q8BGD8 79 aa6.73□□□□□ -1.33
Ercc1-203ENSMUST00000160369 SspoQ8CG65 4998 aa6.72□□□□□ -1.33
Ercc1-203ENSMUST00000160369 Serp2Q6TAW2 65 aa6.71□□□□□ -1.34
Ercc1-203ENSMUST00000160369 Gm10643Q3URG9 111 aa6.69□□□□□ -1.34
Ercc1-203ENSMUST00000160369 B230307C23RikQ8BLB2 64 aa6.69□□□□□ -1.34
Ercc1-203ENSMUST00000160369 Gm11569B1AQB1 180 aa6.68□□□□□ -1.34
Ercc1-203ENSMUST00000160369 Gm11562A0PK51 136 aa6.63□□□□□ -1.35
Ercc1-203ENSMUST00000160369 Anapc13Q8R034 74 aa6.63□□□□□ -1.35
Ercc1-203ENSMUST00000160369 Pcp4P63054 62 aa6.58□□□□□ -1.36
Ercc1-203ENSMUST00000160369 SptssbQ925E8 76 aa6.58□□□□□ -1.36
Ercc1-203ENSMUST00000160369 Krtap3-1A2A591 98 aa6.57□□□□□ -1.36
Ercc1-203ENSMUST00000160369 Gm17606F6ZL36 78 aa6.57□□□□□ -1.36
Ercc1-203ENSMUST00000160369 Gm19426M0QWC7 77 aa6.57□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 74.8 ms