RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Gm35339A0A140LHH9 1649 aa30.79■■■□□ 2.52
Ercc1-203ENSMUST00000160369 NischQ80TM9 1593 aa30.51■■■□□ 2.47
Ercc1-203ENSMUST00000160369 Abcc9P70170 1546 aa29.52■■■□□ 2.32
Ercc1-203ENSMUST00000160369 Abcc8B2RUS7 1588 aa29.41■■■□□ 2.3
Ercc1-203ENSMUST00000160369 ScribQ80U72 1612 aa28.17■■■□□ 2.1
Ercc1-203ENSMUST00000160369 NacadQ5SWP3 1504 aa27.43■■□□□ 1.98
Ercc1-203ENSMUST00000160369 Kdm5dQ62240 1548 aa27.34■■□□□ 1.97
Ercc1-203ENSMUST00000160369 Dcaf1Q80TR8 1506 aa27.21■■□□□ 1.95
Ercc1-203ENSMUST00000160369 Sycp2Q9CUU3 1500 aa26.85■■□□□ 1.89
Ercc1-203ENSMUST00000160369 Rhox8Q6VSS7 320 aa26.62■■□□□ 1.85
Ercc1-203ENSMUST00000160369 Rb1cc1Q9ESK9 1588 aa26.6■■□□□ 1.85
Ercc1-203ENSMUST00000160369 BicraF8VPZ9 1578 aa26.37■■□□□ 1.81
Ercc1-203ENSMUST00000160369 Ccdc180J3QNE4 1664 aa26.32■■□□□ 1.8
Ercc1-203ENSMUST00000160369 Baz1aO88379 1555 aa26.26■■□□□ 1.79
Ercc1-203ENSMUST00000160369 Crybg2B7ZCC2 1516 aa26.2■■□□□ 1.79
Ercc1-203ENSMUST00000160369 Zcchc6Q5BLK4 1491 aaKnown RBP25.85■■□□□ 1.73
Ercc1-203ENSMUST00000160369 Pds5bQ4VA53 1446 aaKnown RBP25.74■■□□□ 1.71
Ercc1-203ENSMUST00000160369 Atad2bE9Q166 1460 aaKnown RBP25.51■■□□□ 1.67
Ercc1-203ENSMUST00000160369 Smarca2Q6DIC0 1577 aa25.49■■□□□ 1.67
Ercc1-203ENSMUST00000160369 Smarca4Q3TKT4 1613 aaKnown RBP25.35■■□□□ 1.65
Ercc1-203ENSMUST00000160369 Thoc2B1AZI6 1594 aaKnown RBP25.35■■□□□ 1.65
Ercc1-203ENSMUST00000160369 Rtl1Q7M732 1744 aa25.3■■□□□ 1.64
Ercc1-203ENSMUST00000160369 Dnajc5bQ9CQ94 199 aa25.29■■□□□ 1.64
Ercc1-203ENSMUST00000160369 Cecr2E9Q2Z1 1453 aa25.28■■□□□ 1.64
Ercc1-203ENSMUST00000160369 Ercc6F8VPZ5 1481 aa25.2■■□□□ 1.62
Ercc1-203ENSMUST00000160369 Iqgap2Q3UQ44 1575 aa25.18■■□□□ 1.62
Ercc1-203ENSMUST00000160369 Cc2d2aQ8CFW7 1633 aa24.95■■□□□ 1.58
Ercc1-203ENSMUST00000160369 Wdr62Q3U3T8 1523 aa24.92■■□□□ 1.58
Ercc1-203ENSMUST00000160369 Brd4Q9ESU6 1400 aaKnown RBP24.88■■□□□ 1.57
Ercc1-203ENSMUST00000160369 Frmpd1A2AKB4 1549 aa24.87■■□□□ 1.57
Ercc1-203ENSMUST00000160369 Ccdc136Q3TVA9 1136 aa24.84■■□□□ 1.57
Ercc1-203ENSMUST00000160369 Fam135aQ6NS59 1506 aa24.84■■□□□ 1.57
Ercc1-203ENSMUST00000160369 CftrP26361 1476 aa24.81■■□□□ 1.56
Ercc1-203ENSMUST00000160369 Cttnbp2B9EJA2 1648 aa24.79■■□□□ 1.56
Ercc1-203ENSMUST00000160369 Phldb1Q6PDH0 1371 aaKnown RBP24.78■■□□□ 1.56
Ercc1-203ENSMUST00000160369 Synj1Q8CHC4 1574 aa24.73■■□□□ 1.55
Ercc1-203ENSMUST00000160369 Baz1bQ9Z277 1479 aa24.72■■□□□ 1.55
Ercc1-203ENSMUST00000160369 Trim41Q5NCC3 630 aa24.59■■□□□ 1.53
Ercc1-203ENSMUST00000160369 Ubl4bQ9CQ84 188 aa24.54■■□□□ 1.52
Ercc1-203ENSMUST00000160369 Esf1Q3V1V3 845 aaKnown RBP24.47■■□□□ 1.51
Ercc1-203ENSMUST00000160369 Unc13aQ4KUS2 1712 aa24.47■■□□□ 1.51
Ercc1-203ENSMUST00000160369 Mrc2Q64449 1479 aa24.3■■□□□ 1.48
Ercc1-203ENSMUST00000160369 Rsf1E9PWW9 1441 aaKnown RBP24.21■■□□□ 1.47
Ercc1-203ENSMUST00000160369 Kif15Q6P9L6 1387 aa24.12■■□□□ 1.45
Ercc1-203ENSMUST00000160369 Cux2P70298 1426 aa24.04■■□□□ 1.44
Ercc1-203ENSMUST00000160369 Lamc3Q9R0B6 1581 aa24.03■■□□□ 1.44
Ercc1-203ENSMUST00000160369 Golga3P55937 1487 aa24.03■■□□□ 1.44
Ercc1-203ENSMUST00000160369 Cngb1E1AZ71 1325 aa23.93■■□□□ 1.42
Ercc1-203ENSMUST00000160369 Top2bQ64511 1612 aa23.92■■□□□ 1.42
Ercc1-203ENSMUST00000160369 Npm1Q61937 292 aaKnown RBP23.88■■□□□ 1.41
Ercc1-203ENSMUST00000160369 TnnQ80Z71 1560 aa23.81■■□□□ 1.4
Ercc1-203ENSMUST00000160369 Cep164Q5DU05 1446 aa23.8■■□□□ 1.4
Ercc1-203ENSMUST00000160369 Ccdc18Q640L5 1455 aa23.76■■□□□ 1.39
Ercc1-203ENSMUST00000160369 Fmn1Q05860 1466 aa23.74■■□□□ 1.39
Ercc1-203ENSMUST00000160369 Kif21aQ9QXL2 1672 aa23.73■■□□□ 1.39
Ercc1-203ENSMUST00000160369 Lrriq1Q0P5X1 1673 aa23.69■■□□□ 1.38
Ercc1-203ENSMUST00000160369 Il27Q8K3I6 234 aa23.64■■□□□ 1.37
Ercc1-203ENSMUST00000160369 Camsap1A2AHC3 1581 aa23.61■■□□□ 1.37
Ercc1-203ENSMUST00000160369 LrpprcQ6PB66 1392 aaKnown RBP23.57■■□□□ 1.36
Ercc1-203ENSMUST00000160369 Dhx29Q6PGC1 1365 aaKnown RBP23.54■■□□□ 1.36
Ercc1-203ENSMUST00000160369 Crocc2F6XLV1 1638 aa23.44■■□□□ 1.34
Ercc1-203ENSMUST00000160369 PogzQ8BZH4 1409 aaKnown RBP23.42■■□□□ 1.34
Ercc1-203ENSMUST00000160369 Urb2E9Q7L1 1524 aaKnown RBP23.4■■□□□ 1.34
Ercc1-203ENSMUST00000160369 Plb1Q3TTY0 1478 aa23.4■■□□□ 1.34
Ercc1-203ENSMUST00000160369 Eif4g3Q80XI3 1579 aaKnown RBP23.39■■□□□ 1.33
Ercc1-203ENSMUST00000160369 Ccdc88bQ4QRL3 1481 aa23.36■■□□□ 1.33
Ercc1-203ENSMUST00000160369 Grin2bQ01097 1482 aa23.33■■□□□ 1.33
Ercc1-203ENSMUST00000160369 Duox2A2AQ99 1517 aa23.31■■□□□ 1.32
Ercc1-203ENSMUST00000160369 Ift140E9PY46 1464 aa23.28■■□□□ 1.32
Ercc1-203ENSMUST00000160369 Top2aQ01320 1528 aaKnown RBP23.28■■□□□ 1.32
Ercc1-203ENSMUST00000160369 Efcab5A0JP43 1406 aa23.24■■□□□ 1.31
Ercc1-203ENSMUST00000160369 Chic1Q8CBW7 227 aa23.22■■□□□ 1.31
Ercc1-203ENSMUST00000160369 NrkQ9R0G8 1455 aa23.17■■□□□ 1.3
Ercc1-203ENSMUST00000160369 HrcG5E8J6 738 aa23.11■■□□□ 1.29
Ercc1-203ENSMUST00000160369 Rusc2Q80U22 1514 aa23.09■■□□□ 1.29
Ercc1-203ENSMUST00000160369 Disp1Q3TDN0 1521 aa23.08■■□□□ 1.29
Ercc1-203ENSMUST00000160369 Samd9lQ69Z37 1561 aa23.07■■□□□ 1.28
Ercc1-203ENSMUST00000160369 Pbrm1Q8BSQ9 1634 aaKnown RBP23.05■■□□□ 1.28
Ercc1-203ENSMUST00000160369 Shroom4Q1W617 1475 aa23.05■■□□□ 1.28
Ercc1-203ENSMUST00000160369 Shroom2A2ALU4 1481 aa23.01■■□□□ 1.27
Ercc1-203ENSMUST00000160369 Cc2d2bA0A286YDU8 1405 aa23■■□□□ 1.27
Ercc1-203ENSMUST00000160369 Nup160Q9Z0W3 1402 aaKnown RBP22.99■■□□□ 1.27
Ercc1-203ENSMUST00000160369 PtprkP35822 1457 aa22.95■■□□□ 1.26
Ercc1-203ENSMUST00000160369 Rad54l2Q99NG0 1466 aa22.92■■□□□ 1.26
Ercc1-203ENSMUST00000160369 Grin2aP35436 1464 aa22.9■■□□□ 1.26
Ercc1-203ENSMUST00000160369 Zeb1Q64318 1117 aa22.88■■□□□ 1.25
Ercc1-203ENSMUST00000160369 Npm2Q80W85 207 aa22.87■■□□□ 1.25
Ercc1-203ENSMUST00000160369 Pabpn1Q8CCS6 302 aaKnown RBP22.87■■□□□ 1.25
Ercc1-203ENSMUST00000160369 Magi3Q9EQJ9 1476 aa22.86■■□□□ 1.25
Ercc1-203ENSMUST00000160369 SynmQ70IV5 1561 aa22.86■■□□□ 1.25
Ercc1-203ENSMUST00000160369 Setd1bQ8CFT2 1985 aa22.85■■□□□ 1.25
Ercc1-203ENSMUST00000160369 AqrQ8CFQ3 1481 aaKnown RBP22.82■■□□□ 1.24
Ercc1-203ENSMUST00000160369 Dnajc5P60904 198 aa22.81■■□□□ 1.24
Ercc1-203ENSMUST00000160369 Gpatch8A2A6A1 1505 aa22.77■■□□□ 1.24
Ercc1-203ENSMUST00000160369 Pla2r1Q62028 1487 aa22.76■■□□□ 1.23
Ercc1-203ENSMUST00000160369 Mroh2bQ7M6Y6 1581 aa22.76■■□□□ 1.23
Ercc1-203ENSMUST00000160369 Pelp1Q9DBD5 1123 aaKnown RBP22.73■■□□□ 1.23
Ercc1-203ENSMUST00000160369 Gab3Q8BSM5 595 aa22.72■■□□□ 1.23
Ercc1-203ENSMUST00000160369 Fgd6Q69ZL1 1399 aa22.71■■□□□ 1.23
Ercc1-203ENSMUST00000160369 Rapgef2Q8CHG7 1496 aa22.66■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 101.3 ms