RNA–Protein interactions for RNA: ENSMUST00000120363.1

Hoxa1-202, Transcript of Homeobox protein Hox-A1, mousemouse

TSL 1 (best) BASIC

Gene Hoxa1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1-202ENSMUST00000120363 Gm10337F7DEP7 55 aa10.79□□□□□ -0.68
Hoxa1-202ENSMUST00000120363 PrkdcP97313 4128 aa10.76□□□□□ -0.69
Hoxa1-202ENSMUST00000120363 Bean1Q9EQG5 255 aa10.76□□□□□ -0.69
Hoxa1-202ENSMUST00000120363 Gm10197F6QEY5 67 aa10.75□□□□□ -0.69
Hoxa1-202ENSMUST00000120363 Mrpl55Q9CZ83 127 aa10.74□□□□□ -0.69
Hoxa1-202ENSMUST00000120363 Krtap14O08640 167 aa10.73□□□□□ -0.69
Hoxa1-202ENSMUST00000120363 Chtf8P0CG14 533 aa10.72□□□□□ -0.69
Hoxa1-202ENSMUST00000120363 H2al1bA0A087WP11 105 aa10.7□□□□□ -0.7
Hoxa1-202ENSMUST00000120363 H2al1kJ3QP08 105 aa10.7□□□□□ -0.7
Hoxa1-202ENSMUST00000120363 Gm10267M0QWD8 85 aa10.7□□□□□ -0.7
Hoxa1-202ENSMUST00000120363 H2al1eQ810S6 105 aa10.7□□□□□ -0.7
Hoxa1-202ENSMUST00000120363 H2al1mQ9DAD9 105 aa10.7□□□□□ -0.7
Hoxa1-202ENSMUST00000120363 Anapc11Q9CPX9 84 aa10.68□□□□□ -0.7
Hoxa1-202ENSMUST00000120363 Gm10160F6Y577 67 aa10.67□□□□□ -0.7
Hoxa1-202ENSMUST00000120363 Phxr4P15974 95 aa10.62□□□□□ -0.71
Hoxa1-202ENSMUST00000120363 FcgbpE9Q0B5 2583 aa10.59□□□□□ -0.71
Hoxa1-202ENSMUST00000120363 Gm10643Q3URG9 111 aa10.58□□□□□ -0.72
Hoxa1-202ENSMUST00000120363 Sox16Q62247 57 aa10.57□□□□□ -0.72
Hoxa1-202ENSMUST00000120363 Dnah7cA0A087WR13 4024 aa10.56□□□□□ -0.72
Hoxa1-202ENSMUST00000120363 Cypt15B1AXS0 87 aa10.55□□□□□ -0.72
Hoxa1-202ENSMUST00000120363 OxtP35454 125 aa10.51□□□□□ -0.73
Hoxa1-202ENSMUST00000120363 Defb13Q8R2I4 64 aa10.51□□□□□ -0.73
Hoxa1-202ENSMUST00000120363 Krtap10-4Q08EG8 221 aa10.46□□□□□ -0.73
Hoxa1-202ENSMUST00000120363 Spaca4Q80ZQ0 127 aa10.46□□□□□ -0.73
Hoxa1-202ENSMUST00000120363 Dnah7aE9Q0T8 4024 aa10.46□□□□□ -0.74
Hoxa1-202ENSMUST00000120363 Krtap13O88375 197 aa10.42□□□□□ -0.74
Hoxa1-202ENSMUST00000120363 Dnah2P0C6F1 4456 aa10.41□□□□□ -0.74
Hoxa1-202ENSMUST00000120363 Vps13dB1ART2 4390 aa10.4□□□□□ -0.74
Hoxa1-202ENSMUST00000120363 Defb38Q7TNV7 63 aa10.39□□□□□ -0.75
Hoxa1-202ENSMUST00000120363 Gm20661K7N787 53 aa10.37□□□□□ -0.75
Hoxa1-202ENSMUST00000120363 Ndufb1P0DN34 57 aa10.36□□□□□ -0.75
Hoxa1-202ENSMUST00000120363 Hectd4E9Q2E4 4418 aa10.36□□□□□ -0.75
Hoxa1-202ENSMUST00000120363 Dnah5Q8VHE6 4621 aa10.35□□□□□ -0.75
Hoxa1-202ENSMUST00000120363 4933415A04RikQ9D443 101 aa10.35□□□□□ -0.75
Hoxa1-202ENSMUST00000120363 Gm21798J3QNU5 87 aa10.33□□□□□ -0.76
Hoxa1-202ENSMUST00000120363 ApobE9Q414 4505 aa10.31□□□□□ -0.76
Hoxa1-202ENSMUST00000120363 Pkd1O08852 4293 aa10.27□□□□□ -0.77
Hoxa1-202ENSMUST00000120363 Rps29P62274 56 aa10.26□□□□□ -0.77
Hoxa1-202ENSMUST00000120363 Limd2Q8BGB5 128 aa10.26□□□□□ -0.77
Hoxa1-202ENSMUST00000120363 Uqcr11Q9CPX8 56 aa10.24□□□□□ -0.77
Hoxa1-202ENSMUST00000120363 Wfdc3Q14AE4 130 aa10.21□□□□□ -0.78
Hoxa1-202ENSMUST00000120363 Gm2696A0A1W2P709 240 aa10.17□□□□□ -0.78
Hoxa1-202ENSMUST00000120363 Krtap10-10A0A1W2P7T6 217 aa10.17□□□□□ -0.78
Hoxa1-202ENSMUST00000120363 Gm10999F6Q4M4 69 aa10.17□□□□□ -0.78
Hoxa1-202ENSMUST00000120363 SptssbQ925E8 76 aa10.17□□□□□ -0.78
Hoxa1-202ENSMUST00000120363 Lrp1bQ9JI18 4599 aa10.15□□□□□ -0.78
Hoxa1-202ENSMUST00000120363 Stard9Q80TF6 4561 aa10.15□□□□□ -0.79
Hoxa1-202ENSMUST00000120363 Gm26620Q9CY65 116 aa10.14□□□□□ -0.79
Hoxa1-202ENSMUST00000120363 Q8BGJ3 129 aa10.12□□□□□ -0.79
Hoxa1-202ENSMUST00000120363 2310034C09RikQ9D746 214 aa10.11□□□□□ -0.79
Hoxa1-202ENSMUST00000120363 A930033H14RikG5E8X6 103 aa10.09□□□□□ -0.79
Hoxa1-202ENSMUST00000120363 Krtap3-2Q9D638 99 aa10.09□□□□□ -0.79
Hoxa1-202ENSMUST00000120363 Krtap3-3Q9D7P0 99 aa10.09□□□□□ -0.79
Hoxa1-202ENSMUST00000120363 2310079G19RikQ9D6L6 185 aa10.06□□□□□ -0.8
Hoxa1-202ENSMUST00000120363 4930507D05RikQ8C9C9 103 aa10.05□□□□□ -0.8
Hoxa1-202ENSMUST00000120363 Pkhd1E9PZ36 4059 aa10.01□□□□□ -0.81
Hoxa1-202ENSMUST00000120363 RetnlbQ99P86 105 aa9.98□□□□□ -0.81
Hoxa1-202ENSMUST00000120363 Dync1h1Q9JHU4 4644 aaKnown RBP9.98□□□□□ -0.81
Hoxa1-202ENSMUST00000120363 Fat1A0A1L1SQU7 4645 aa9.94□□□□□ -0.82
Hoxa1-202ENSMUST00000120363 SacsQ9JLC8 4582 aa9.94□□□□□ -0.82
Hoxa1-202ENSMUST00000120363 Fat2Q5F226 4351 aa9.93□□□□□ -0.82
Hoxa1-202ENSMUST00000120363 Gm11939A2A592 99 aa9.92□□□□□ -0.82
Hoxa1-202ENSMUST00000120363 Gm4491E0CX42 125 aa9.91□□□□□ -0.82
Hoxa1-202ENSMUST00000120363 Gm3646F6S692 53 aa9.9□□□□□ -0.82
Hoxa1-202ENSMUST00000120363 D6Ertd527eA0A0N4SWI3 464 aa9.85□□□□□ -0.83
Hoxa1-202ENSMUST00000120363 Defb1P56386 69 aa9.81□□□□□ -0.84
Hoxa1-202ENSMUST00000120363 9230102O04RikA2ASX7 82 aa9.77□□□□□ -0.85
Hoxa1-202ENSMUST00000120363 Gm5767A0A0J9YTU8 78 aa9.75□□□□□ -0.85
Hoxa1-202ENSMUST00000120363 Pkhd1l1Q80ZA4 4249 aa9.7□□□□□ -0.86
Hoxa1-202ENSMUST00000120363 1700042G07RikB1AUF7 90 aa9.68□□□□□ -0.86
Hoxa1-202ENSMUST00000120363 Sec61gP60060 68 aa9.66□□□□□ -0.86
Hoxa1-202ENSMUST00000120363 Ndufs5Q99LY9 106 aa9.66□□□□□ -0.86
Hoxa1-202ENSMUST00000120363 Ryr3A2AGL3 4863 aa9.64□□□□□ -0.87
Hoxa1-202ENSMUST00000120363 Krtap19-5O08632 62 aa9.63□□□□□ -0.87
Hoxa1-202ENSMUST00000120363 Cox6b2Q80ZN9 88 aa9.61□□□□□ -0.87
Hoxa1-202ENSMUST00000120363 Vps13bQ80TY5 3993 aa9.54□□□□□ -0.88
Hoxa1-202ENSMUST00000120363 Ryr2E9Q401 4966 aaKnown RBP9.5□□□□□ -0.89
Hoxa1-202ENSMUST00000120363 Rnase13Q5GAM7 153 aa9.48□□□□□ -0.89
Hoxa1-202ENSMUST00000120363 Rpl37Q9D823 97 aa9.48□□□□□ -0.89
Hoxa1-202ENSMUST00000120363 Pla2g10Q9QXX3 151 aa9.48□□□□□ -0.89
Hoxa1-202ENSMUST00000120363 Lrp1Q91ZX7 4545 aaKnown RBP9.4□□□□□ -0.91
Hoxa1-202ENSMUST00000120363 Kmt2cQ8BRH4 4903 aa9.37□□□□□ -0.91
Hoxa1-202ENSMUST00000120363 Gm17416Q30KP4 66 aa9.36□□□□□ -0.91
Hoxa1-202ENSMUST00000120363 Krtap15-1Q9QZU5 150 aa9.36□□□□□ -0.91
Hoxa1-202ENSMUST00000120363 Gm9736A0A1W2P7N1 277 aa9.35□□□□□ -0.91
Hoxa1-202ENSMUST00000120363 Gm5965D3Z724 196 aa9.35□□□□□ -0.91
Hoxa1-202ENSMUST00000120363 Gm17606F6ZL36 78 aa9.34□□□□□ -0.91
Hoxa1-202ENSMUST00000120363 Fat3Q8BNA6 4555 aa9.32□□□□□ -0.92
Hoxa1-202ENSMUST00000120363 Gm9955Q8CEJ8 102 aa9.31□□□□□ -0.92
Hoxa1-202ENSMUST00000120363 Gm20537G3UYK7 97 aa9.3□□□□□ -0.92
Hoxa1-202ENSMUST00000120363 Dnah8Q91XQ0 4731 aa9.29□□□□□ -0.92
Hoxa1-202ENSMUST00000120363 Ryr1E9PZQ0 5035 aa9.26□□□□□ -0.93
Hoxa1-202ENSMUST00000120363 Gm9821Q8K076 103 aa9.25□□□□□ -0.93
Hoxa1-202ENSMUST00000120363 Gm10382Q3V0T5 144 aa9.17□□□□□ -0.94
Hoxa1-202ENSMUST00000120363 Gm3880A0A1B0GSB3 72 aa9.11□□□□□ -0.95
Hoxa1-202ENSMUST00000120363 2210017I01RikA0A0A6YVV1 95 aa9.1□□□□□ -0.95
Hoxa1-202ENSMUST00000120363 Krtap3-1A2A591 98 aa9.09□□□□□ -0.95
Hoxa1-202ENSMUST00000120363 Abca13Q5SSE9 5034 aa9.05□□□□□ -0.96
Hoxa1-202ENSMUST00000120363 Mycbp2Q7TPH6 4711 aa9.04□□□□□ -0.96
Hoxa1-202ENSMUST00000120363 Dnhd1D3Z2X2 4750 aa8.98□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 59.2 ms