RNA–Protein interactions for RNA: ENSMUST00000120363.1

Hoxa1-202, Transcript of Homeobox protein Hox-A1, mousemouse

TSL 1 (best) BASIC

Gene Hoxa1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1-202ENSMUST00000120363 NischQ80TM9 1593 aa35.44■■■■□ 3.26
Hoxa1-202ENSMUST00000120363 Gm35339A0A140LHH9 1649 aa35.11■■■■□ 3.21
Hoxa1-202ENSMUST00000120363 Abcc9P70170 1546 aa34.5■■■■□ 3.11
Hoxa1-202ENSMUST00000120363 Abcc8B2RUS7 1588 aa33.72■■■□□ 2.99
Hoxa1-202ENSMUST00000120363 Rtl1Q7M732 1744 aa32.47■■■□□ 2.79
Hoxa1-202ENSMUST00000120363 Rhox8Q6VSS7 320 aa32.39■■■□□ 2.78
Hoxa1-202ENSMUST00000120363 Ccdc180J3QNE4 1664 aa31.72■■■□□ 2.67
Hoxa1-202ENSMUST00000120363 Dcaf1Q80TR8 1506 aa31.7■■■□□ 2.67
Hoxa1-202ENSMUST00000120363 ScribQ80U72 1612 aa31.39■■■□□ 2.62
Hoxa1-202ENSMUST00000120363 Zcchc6Q5BLK4 1491 aaKnown RBP31.05■■■□□ 2.56
Hoxa1-202ENSMUST00000120363 Rb1cc1Q9ESK9 1588 aa31.05■■■□□ 2.56
Hoxa1-202ENSMUST00000120363 Kdm5dQ62240 1548 aa30.83■■■□□ 2.53
Hoxa1-202ENSMUST00000120363 Baz1aO88379 1555 aa30.77■■■□□ 2.52
Hoxa1-202ENSMUST00000120363 NacadQ5SWP3 1504 aa30.72■■■□□ 2.51
Hoxa1-202ENSMUST00000120363 Crybg2B7ZCC2 1516 aa30.41■■■□□ 2.46
Hoxa1-202ENSMUST00000120363 HrcG5E8J6 738 aa30.15■■■□□ 2.42
Hoxa1-202ENSMUST00000120363 Smarca2Q6DIC0 1577 aa30.05■■■□□ 2.4
Hoxa1-202ENSMUST00000120363 Sycp2Q9CUU3 1500 aa30.01■■■□□ 2.39
Hoxa1-202ENSMUST00000120363 Ccdc136Q3TVA9 1136 aa29.96■■■□□ 2.39
Hoxa1-202ENSMUST00000120363 Trim41Q5NCC3 630 aa29.71■■■□□ 2.35
Hoxa1-202ENSMUST00000120363 Rpgrip1Q9EPQ2 1331 aa29.69■■■□□ 2.34
Hoxa1-202ENSMUST00000120363 Brd4Q9ESU6 1400 aaKnown RBP29.36■■■□□ 2.29
Hoxa1-202ENSMUST00000120363 Cep164Q5DU05 1446 aa29.29■■■□□ 2.28
Hoxa1-202ENSMUST00000120363 BicraF8VPZ9 1578 aa29.24■■■□□ 2.27
Hoxa1-202ENSMUST00000120363 Cecr2E9Q2Z1 1453 aa29.11■■■□□ 2.25
Hoxa1-202ENSMUST00000120363 Acin1Q9JIX8 1338 aaKnown RBP29.09■■■□□ 2.25
Hoxa1-202ENSMUST00000120363 Synj1Q8CHC4 1574 aa28.96■■■□□ 2.23
Hoxa1-202ENSMUST00000120363 Golga3P55937 1487 aa28.94■■■□□ 2.22
Hoxa1-202ENSMUST00000120363 CftrP26361 1476 aa28.85■■■□□ 2.21
Hoxa1-202ENSMUST00000120363 Cttnbp2B9EJA2 1648 aa28.81■■■□□ 2.2
Hoxa1-202ENSMUST00000120363 Rsf1E9PWW9 1441 aaKnown RBP28.78■■■□□ 2.2
Hoxa1-202ENSMUST00000120363 Cngb1E1AZ71 1325 aa28.75■■■□□ 2.19
Hoxa1-202ENSMUST00000120363 Smarca4Q3TKT4 1613 aaKnown RBP28.71■■■□□ 2.19
Hoxa1-202ENSMUST00000120363 Top2bQ64511 1612 aa28.67■■■□□ 2.18
Hoxa1-202ENSMUST00000120363 Ccdc88bQ4QRL3 1481 aa28.57■■■□□ 2.16
Hoxa1-202ENSMUST00000120363 Chic1Q8CBW7 227 aa28.56■■■□□ 2.16
Hoxa1-202ENSMUST00000120363 Ehmt2Q9Z148 1263 aaKnown RBP28.55■■■□□ 2.16
Hoxa1-202ENSMUST00000120363 Esf1Q3V1V3 845 aaKnown RBP28.46■■■□□ 2.15
Hoxa1-202ENSMUST00000120363 Iqgap2Q3UQ44 1575 aa28.28■■■□□ 2.12
Hoxa1-202ENSMUST00000120363 Fmn1Q05860 1466 aa28.26■■■□□ 2.12
Hoxa1-202ENSMUST00000120363 Cc2d2aQ8CFW7 1633 aa28.23■■■□□ 2.11
Hoxa1-202ENSMUST00000120363 Atad2bE9Q166 1460 aaKnown RBP28.22■■■□□ 2.11
Hoxa1-202ENSMUST00000120363 Gab3Q8BSM5 595 aa28.21■■■□□ 2.11
Hoxa1-202ENSMUST00000120363 Pds5bQ4VA53 1446 aaKnown RBP28.12■■■□□ 2.09
Hoxa1-202ENSMUST00000120363 Top2aQ01320 1528 aaKnown RBP28.09■■■□□ 2.09
Hoxa1-202ENSMUST00000120363 Rapgef2Q8CHG7 1496 aa28.02■■■□□ 2.08
Hoxa1-202ENSMUST00000120363 TnnQ80Z71 1560 aa27.85■■■□□ 2.05
Hoxa1-202ENSMUST00000120363 Wdr62Q3U3T8 1523 aa27.75■■■□□ 2.03
Hoxa1-202ENSMUST00000120363 Cep162Q6ZQ06 1403 aa27.73■■■□□ 2.03
Hoxa1-202ENSMUST00000120363 Frmpd1A2AKB4 1549 aa27.68■■■□□ 2.02
Hoxa1-202ENSMUST00000120363 NefmP08553 848 aa27.67■■■□□ 2.02
Hoxa1-202ENSMUST00000120363 Lamc3Q9R0B6 1581 aa27.61■■■□□ 2.01
Hoxa1-202ENSMUST00000120363 Eif4g1Q6NZJ6 1600 aaKnown RBP27.6■■■□□ 2.01
Hoxa1-202ENSMUST00000120363 Ercc6F8VPZ5 1481 aa27.59■■■□□ 2.01
Hoxa1-202ENSMUST00000120363 Pcgf6Q99NA9 353 aa27.57■■■□□ 2
Hoxa1-202ENSMUST00000120363 Mier1Q5UAK0 511 aa27.49■■□□□ 1.99
Hoxa1-202ENSMUST00000120363 Npm2Q80W85 207 aa27.41■■□□□ 1.98
Hoxa1-202ENSMUST00000120363 NrkQ9R0G8 1455 aa27.39■■□□□ 1.98
Hoxa1-202ENSMUST00000120363 Unc13aQ4KUS2 1712 aa27.36■■□□□ 1.97
Hoxa1-202ENSMUST00000120363 Kif15Q6P9L6 1387 aa27.32■■□□□ 1.96
Hoxa1-202ENSMUST00000120363 Camsap1A2AHC3 1581 aa27.31■■□□□ 1.96
Hoxa1-202ENSMUST00000120363 Myt1lP97500 1187 aa27.29■■□□□ 1.96
Hoxa1-202ENSMUST00000120363 Arhgap35Q91YM2 1499 aa27.28■■□□□ 1.96
Hoxa1-202ENSMUST00000120363 Shroom4Q1W617 1475 aa27.26■■□□□ 1.95
Hoxa1-202ENSMUST00000120363 Map3k1P53349 1493 aa27.26■■□□□ 1.95
Hoxa1-202ENSMUST00000120363 Clip1Q922J3 1391 aa27.24■■□□□ 1.95
Hoxa1-202ENSMUST00000120363 Ccdc18Q640L5 1455 aa27.22■■□□□ 1.95
Hoxa1-202ENSMUST00000120363 PtprkP35822 1457 aa27.17■■□□□ 1.94
Hoxa1-202ENSMUST00000120363 UbtfP25976 765 aaKnown RBP27.16■■□□□ 1.94
Hoxa1-202ENSMUST00000120363 Thoc2B1AZI6 1594 aaKnown RBP27.15■■□□□ 1.94
Hoxa1-202ENSMUST00000120363 Phldb1Q6PDH0 1371 aaKnown RBP27.15■■□□□ 1.94
Hoxa1-202ENSMUST00000120363 Supt5hO55201 1082 aaKnown RBP27.14■■□□□ 1.93
Hoxa1-202ENSMUST00000120363 Grin2bQ01097 1482 aa27.11■■□□□ 1.93
Hoxa1-202ENSMUST00000120363 Eea1Q8BL66 1411 aa27.1■■□□□ 1.93
Hoxa1-202ENSMUST00000120363 Zeb1Q64318 1117 aa26.99■■□□□ 1.91
Hoxa1-202ENSMUST00000120363 AqrQ8CFQ3 1481 aaKnown RBP26.98■■□□□ 1.91
Hoxa1-202ENSMUST00000120363 Mroh2bQ7M6Y6 1581 aa26.97■■□□□ 1.91
Hoxa1-202ENSMUST00000120363 Il27Q8K3I6 234 aa26.95■■□□□ 1.91
Hoxa1-202ENSMUST00000120363 Arap1Q4LDD4 1452 aa26.95■■□□□ 1.91
Hoxa1-202ENSMUST00000120363 Arhgef5E9Q7D5 1581 aa26.95■■□□□ 1.9
Hoxa1-202ENSMUST00000120363 Fam135aQ6NS59 1506 aa26.94■■□□□ 1.9
Hoxa1-202ENSMUST00000120363 Ncapd3Q6ZQK0 1506 aa26.92■■□□□ 1.9
Hoxa1-202ENSMUST00000120363 Erich3F6QRE9 1637 aa26.89■■□□□ 1.9
Hoxa1-202ENSMUST00000120363 Cux2P70298 1426 aa26.89■■□□□ 1.9
Hoxa1-202ENSMUST00000120363 Setd5Q5XJV7 1441 aa26.88■■□□□ 1.89
Hoxa1-202ENSMUST00000120363 Efcab5A0JP43 1406 aa26.87■■□□□ 1.89
Hoxa1-202ENSMUST00000120363 Las1lA2BE28 776 aaKnown RBP26.85■■□□□ 1.89
Hoxa1-202ENSMUST00000120363 Plekhg3Q4VAC9 1341 aa26.83■■□□□ 1.89
Hoxa1-202ENSMUST00000120363 Baz1bQ9Z277 1479 aa26.83■■□□□ 1.89
Hoxa1-202ENSMUST00000120363 Tiam1Q60610 1591 aa26.8■■□□□ 1.88
Hoxa1-202ENSMUST00000120363 Ankrd26Q811D2 1581 aa26.76■■□□□ 1.87
Hoxa1-202ENSMUST00000120363 Ubl4bQ9CQ84 188 aa26.76■■□□□ 1.87
Hoxa1-202ENSMUST00000120363 LrpprcQ6PB66 1392 aaKnown RBP26.76■■□□□ 1.87
Hoxa1-202ENSMUST00000120363 Npm1Q61937 292 aaKnown RBP26.75■■□□□ 1.87
Hoxa1-202ENSMUST00000120363 PogzQ8BZH4 1409 aaKnown RBP26.74■■□□□ 1.87
Hoxa1-202ENSMUST00000120363 Carmil1Q6EDY6 1374 aa26.72■■□□□ 1.87
Hoxa1-202ENSMUST00000120363 Duox2A2AQ99 1517 aa26.66■■□□□ 1.86
Hoxa1-202ENSMUST00000120363 TchhA0A0B4J1F9 1599 aa26.65■■□□□ 1.86
Hoxa1-202ENSMUST00000120363 Naip1Q9QWK5 1403 aa26.64■■□□□ 1.85
Hoxa1-202ENSMUST00000120363 Sall2Q9QX96 1004 aa26.62■■□□□ 1.85
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms