RNA–Protein interactions for RNA: ENSMUST00000113685.9

Tpm1-205, Transcript of Tropomyosin alpha-1 chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Tpm1, Length 1,208 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-205ENSMUST00000113685 Gm20604F8WIA3 75 aa5.99□□□□□ -1.45
Tpm1-205ENSMUST00000113685 A930033H14RikG5E8X6 103 aa5.99□□□□□ -1.45
Tpm1-205ENSMUST00000113685 Gm28051J3QMA2 81 aa5.99□□□□□ -1.45
Tpm1-205ENSMUST00000113685 Rbm3O89086 153 aaKnown RBP5.99□□□□□ -1.45
Tpm1-205ENSMUST00000113685 Cystm1Q8K353 104 aa5.99□□□□□ -1.45
Tpm1-205ENSMUST00000113685 Igkv8-21A0A140T8P7 120 aa5.98□□□□□ -1.45
Tpm1-205ENSMUST00000113685 Gm26602M0QWA4 95 aa5.98□□□□□ -1.45
Tpm1-205ENSMUST00000113685 MturnQ8CGA4 131 aa5.98□□□□□ -1.45
Tpm1-205ENSMUST00000113685 4930535I16RikQ9CUI2 172 aa5.98□□□□□ -1.45
Tpm1-205ENSMUST00000113685 A730071L15RikQ8C4X0 137 aa5.95□□□□□ -1.46
Tpm1-205ENSMUST00000113685 Igkv8-27A0A0G2JF28 120 aa5.94□□□□□ -1.46
Tpm1-205ENSMUST00000113685 Igkv8-30A0A140T8M3 121 aa5.94□□□□□ -1.46
Tpm1-205ENSMUST00000113685 Gm2310J3QNJ2 377 aa5.94□□□□□ -1.46
Tpm1-205ENSMUST00000113685 Trav14d-3-dv8A0A075B619 120 aa5.92□□□□□ -1.46
Tpm1-205ENSMUST00000113685 Igkv8-28A0A0G2JE47 121 aa5.92□□□□□ -1.46
Tpm1-205ENSMUST00000113685 Ube2v1Q9CZY3 147 aa5.92□□□□□ -1.46
Tpm1-205ENSMUST00000113685 Gm26920S4R2A5 56 aa5.92□□□□□ -1.46
Tpm1-205ENSMUST00000113685 Xcl1P47993 114 aa5.91□□□□□ -1.46
Tpm1-205ENSMUST00000113685 Prm1P02319 51 aa5.89□□□□□ -1.47
Tpm1-205ENSMUST00000113685 Tmem213Q08EA8 116 aa5.89□□□□□ -1.47
Tpm1-205ENSMUST00000113685 Pcp4l1Q6W8Q3 68 aa5.89□□□□□ -1.47
Tpm1-205ENSMUST00000113685 Gm5767A0A0J9YTU8 78 aa5.88□□□□□ -1.47
Tpm1-205ENSMUST00000113685 Gm7735D3YX18 52 aa5.88□□□□□ -1.47
Tpm1-205ENSMUST00000113685 Mtatp8P03930 67 aa5.88□□□□□ -1.47
Tpm1-205ENSMUST00000113685 Gm6217A0A1Y7VJK9 128 aa5.87□□□□□ -1.47
Tpm1-205ENSMUST00000113685 UqcrqQ9CQ69 82 aa5.87□□□□□ -1.47
Tpm1-205ENSMUST00000113685 Gm10308Q9CVR5 141 aa5.87□□□□□ -1.47
Tpm1-205ENSMUST00000113685 Ormdl1Q921I0 153 aa5.86□□□□□ -1.47
Tpm1-205ENSMUST00000113685 Gm44790A0A0N4SV91 103 aa5.84□□□□□ -1.47
Tpm1-205ENSMUST00000113685 C130032M10RikQ8C888 123 aa5.84□□□□□ -1.47
Tpm1-205ENSMUST00000113685 Gm37013Q8K491 104 aa5.84□□□□□ -1.47
Tpm1-205ENSMUST00000113685 Mrpl34Q99N91 92 aa5.84□□□□□ -1.47
Tpm1-205ENSMUST00000113685 Cypt15B1AXS0 87 aa5.83□□□□□ -1.48
Tpm1-205ENSMUST00000113685 Gm5965D3Z724 196 aa5.83□□□□□ -1.48
Tpm1-205ENSMUST00000113685 Gm9789Q8BIG3 52 aa5.83□□□□□ -1.48
Tpm1-205ENSMUST00000113685 Gm9821Q8K076 103 aa5.83□□□□□ -1.48
Tpm1-205ENSMUST00000113685 Gm26620Q9CY65 116 aa5.82□□□□□ -1.48
Tpm1-205ENSMUST00000113685 Ush2AQ2QI47 5193 aa5.81□□□□□ -1.48
Tpm1-205ENSMUST00000113685 Ubl5Q9EPV8 73 aa5.78□□□□□ -1.48
Tpm1-205ENSMUST00000113685 BikO70337 150 aa5.76□□□□□ -1.49
Tpm1-205ENSMUST00000113685 Scgb1b2O35176 93 aa5.75□□□□□ -1.49
Tpm1-205ENSMUST00000113685 Defa21Q8C1P2 93 aa5.75□□□□□ -1.49
Tpm1-205ENSMUST00000113685 Lyrm7Q9DA03 104 aa5.75□□□□□ -1.49
Tpm1-205ENSMUST00000113685 Igkv3-3A0A140T8Q0 119 aa5.74□□□□□ -1.49
Tpm1-205ENSMUST00000113685 4932415D10RikA0A1W2P6U8 4986 aa5.72□□□□□ -1.49
Tpm1-205ENSMUST00000113685 Sec61bQ9CQS8 96 aaKnown RBP5.72□□□□□ -1.49
Tpm1-205ENSMUST00000113685 Reg3aO09037 175 aa5.71□□□□□ -1.5
Tpm1-205ENSMUST00000113685 Gtf2h5Q8K2X8 71 aa5.71□□□□□ -1.5
Tpm1-205ENSMUST00000113685 Trav3-1Q5R1I8 114 aa5.7□□□□□ -1.5
Tpm1-205ENSMUST00000113685 Gm10197F6QEY5 67 aa5.69□□□□□ -1.5
Tpm1-205ENSMUST00000113685 MplkipQ9D011 178 aa5.69□□□□□ -1.5
Tpm1-205ENSMUST00000113685 Hmcn2A2AJ76 5100 aa5.67□□□□□ -1.5
Tpm1-205ENSMUST00000113685 Krtap17-1A2A5X6 109 aa5.67□□□□□ -1.5
Tpm1-205ENSMUST00000113685 Defb13Q8R2I4 64 aa5.67□□□□□ -1.5
Tpm1-205ENSMUST00000113685 Krtap15-1Q9QZU5 150 aa5.67□□□□□ -1.5
Tpm1-205ENSMUST00000113685 Igkv8-19A0A0G2JFN8 121 aa5.66□□□□□ -1.5
Tpm1-205ENSMUST00000113685 A0A286YCP9 139 aa5.65□□□□□ -1.5
Tpm1-205ENSMUST00000113685 Rpl37Q9D823 97 aa5.65□□□□□ -1.5
Tpm1-205ENSMUST00000113685 Pxt1Q8K459 51 aa5.64□□□□□ -1.51
Tpm1-205ENSMUST00000113685 Tmem254aP0DN89 123 aa5.63□□□□□ -1.51
Tpm1-205ENSMUST00000113685 Tmem254bP0DN90 123 aa5.63□□□□□ -1.51
Tpm1-205ENSMUST00000113685 Tmem254cP0DN91 123 aa5.63□□□□□ -1.51
Tpm1-205ENSMUST00000113685 Ubr4A2AN08 5180 aa5.63□□□□□ -1.51
Tpm1-205ENSMUST00000113685 Apoc4Q61268 124 aa5.6□□□□□ -1.51
Tpm1-205ENSMUST00000113685 7530416G11RikJ3QJX6 159 aa5.57□□□□□ -1.52
Tpm1-205ENSMUST00000113685 Gm10267M0QWD8 85 aa5.57□□□□□ -1.52
Tpm1-205ENSMUST00000113685 Samd13D3YUG0 102 aa5.55□□□□□ -1.52
Tpm1-205ENSMUST00000113685 Rnase13Q5GAM7 153 aa5.55□□□□□ -1.52
Tpm1-205ENSMUST00000113685 A0A286YE49 62 aa5.54□□□□□ -1.52
Tpm1-205ENSMUST00000113685 Prr15lQ8JZM2 100 aa5.54□□□□□ -1.52
Tpm1-205ENSMUST00000113685 2310057N15RikQ9D6T8 200 aa5.53□□□□□ -1.52
Tpm1-205ENSMUST00000113685 Hist1h4aP62806 103 aaKnown RBP5.52□□□□□ -1.53
Tpm1-205ENSMUST00000113685 Gm28539A0A087WSL9 92 aa5.51□□□□□ -1.53
Tpm1-205ENSMUST00000113685 Naa38Q9D2U5 125 aa5.51□□□□□ -1.53
Tpm1-205ENSMUST00000113685 Crct1Q6PAI5 102 aa5.48□□□□□ -1.53
Tpm1-205ENSMUST00000113685 Krtap1-3A2A588 173 aa5.47□□□□□ -1.53
Tpm1-205ENSMUST00000113685 Fam240bJ3QMB3 78 aa5.47□□□□□ -1.53
Tpm1-205ENSMUST00000113685 Bud31Q6PGH1 103 aa5.47□□□□□ -1.53
Tpm1-205ENSMUST00000113685 Ndufc1Q9CQY9 76 aa5.46□□□□□ -1.54
Tpm1-205ENSMUST00000113685 2310034C09RikQ9D746 214 aa5.46□□□□□ -1.54
Tpm1-205ENSMUST00000113685 9230102O04RikA2ASX7 82 aa5.44□□□□□ -1.54
Tpm1-205ENSMUST00000113685 Fam229aB2KGE5 128 aa5.43□□□□□ -1.54
Tpm1-205ENSMUST00000113685 Spink8Q09TK9 105 aa5.43□□□□□ -1.54
Tpm1-205ENSMUST00000113685 Krtap31-2Q8CAY5 177 aa5.43□□□□□ -1.54
Tpm1-205ENSMUST00000113685 Gm17416Q30KP4 66 aa5.42□□□□□ -1.54
Tpm1-205ENSMUST00000113685 Gm4491E0CX42 125 aa5.41□□□□□ -1.54
Tpm1-205ENSMUST00000113685 Krtap3-1A2A591 98 aa5.4□□□□□ -1.54
Tpm1-205ENSMUST00000113685 Gm45213A0A0U1RNZ6 101 aa5.38□□□□□ -1.55
Tpm1-205ENSMUST00000113685 1700074P13RikQ9D9G7 251 aa5.38□□□□□ -1.55
Tpm1-205ENSMUST00000113685 LorP18165 486 aa5.37□□□□□ -1.55
Tpm1-205ENSMUST00000113685 Atp5eP56382 52 aa5.35□□□□□ -1.55
Tpm1-205ENSMUST00000113685 ZanO88799 5376 aa5.34□□□□□ -1.55
Tpm1-205ENSMUST00000113685 Chtf8P0CG14 533 aa5.34□□□□□ -1.55
Tpm1-205ENSMUST00000113685 BatfO35284 125 aa5.33□□□□□ -1.56
Tpm1-205ENSMUST00000113685 Lce1hQ9D6R3 140 aa5.33□□□□□ -1.56
Tpm1-205ENSMUST00000113685 1700042G07RikB1AUF7 90 aa5.32□□□□□ -1.56
Tpm1-205ENSMUST00000113685 Gm10318A0A1W2P728 225 aa5.31□□□□□ -1.56
Tpm1-205ENSMUST00000113685 Gm11562A0PK51 136 aa5.31□□□□□ -1.56
Tpm1-205ENSMUST00000113685 Q8BGJ3 129 aa5.31□□□□□ -1.56
Tpm1-205ENSMUST00000113685 Fam229bQ8CF36 80 aa5.31□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 130.4 ms