RNA–Protein interactions for RNA: ENSMUST00000113685.9

Tpm1-205, Transcript of Tropomyosin alpha-1 chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Tpm1, Length 1,208 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-205ENSMUST00000113685 Gm35339A0A140LHH9 1649 aa23■■□□□ 1.27
Tpm1-205ENSMUST00000113685 NischQ80TM9 1593 aa22.79■■□□□ 1.24
Tpm1-205ENSMUST00000113685 Abcc9P70170 1546 aa22.06■■□□□ 1.12
Tpm1-205ENSMUST00000113685 Abcc8B2RUS7 1588 aa21.95■■□□□ 1.11
Tpm1-205ENSMUST00000113685 ScribQ80U72 1612 aa20.95■□□□□ 0.94
Tpm1-205ENSMUST00000113685 NacadQ5SWP3 1504 aa20.49■□□□□ 0.87
Tpm1-205ENSMUST00000113685 Dcaf1Q80TR8 1506 aa20.4■□□□□ 0.86
Tpm1-205ENSMUST00000113685 Kdm5dQ62240 1548 aa20.37■□□□□ 0.85
Tpm1-205ENSMUST00000113685 Sycp2Q9CUU3 1500 aa20.03■□□□□ 0.8
Tpm1-205ENSMUST00000113685 Rhox8Q6VSS7 320 aa19.9■□□□□ 0.78
Tpm1-205ENSMUST00000113685 Rb1cc1Q9ESK9 1588 aa19.86■□□□□ 0.77
Tpm1-205ENSMUST00000113685 Ccdc180J3QNE4 1664 aa19.77■□□□□ 0.76
Tpm1-205ENSMUST00000113685 Crybg2B7ZCC2 1516 aa19.66■□□□□ 0.74
Tpm1-205ENSMUST00000113685 Baz1aO88379 1555 aa19.64■□□□□ 0.73
Tpm1-205ENSMUST00000113685 BicraF8VPZ9 1578 aa19.63■□□□□ 0.73
Tpm1-205ENSMUST00000113685 Zcchc6Q5BLK4 1491 aaKnown RBP19.28■□□□□ 0.68
Tpm1-205ENSMUST00000113685 Pds5bQ4VA53 1446 aaKnown RBP19.23■□□□□ 0.67
Tpm1-205ENSMUST00000113685 Mapk8ip2Q9ERE9 830 aa19.09■□□□□ 0.65
Tpm1-205ENSMUST00000113685 Smarca2Q6DIC0 1577 aa19.06■□□□□ 0.64
Tpm1-205ENSMUST00000113685 Atad2bE9Q166 1460 aaKnown RBP19.05■□□□□ 0.64
Tpm1-205ENSMUST00000113685 Dnajc5bQ9CQ94 199 aa19.04■□□□□ 0.64
Tpm1-205ENSMUST00000113685 Rtl1Q7M732 1744 aa18.98■□□□□ 0.63
Tpm1-205ENSMUST00000113685 Smarca4Q3TKT4 1613 aaKnown RBP18.92■□□□□ 0.62
Tpm1-205ENSMUST00000113685 Thoc2B1AZI6 1594 aaKnown RBP18.85■□□□□ 0.61
Tpm1-205ENSMUST00000113685 Cecr2E9Q2Z1 1453 aa18.82■□□□□ 0.6
Tpm1-205ENSMUST00000113685 Ercc6F8VPZ5 1481 aa18.8■□□□□ 0.6
Tpm1-205ENSMUST00000113685 Iqgap2Q3UQ44 1575 aa18.77■□□□□ 0.6
Tpm1-205ENSMUST00000113685 Brd4Q9ESU6 1400 aaKnown RBP18.65■□□□□ 0.58
Tpm1-205ENSMUST00000113685 Wdr62Q3U3T8 1523 aa18.59■□□□□ 0.57
Tpm1-205ENSMUST00000113685 Cc2d2aQ8CFW7 1633 aa18.56■□□□□ 0.56
Tpm1-205ENSMUST00000113685 Baz1bQ9Z277 1479 aa18.55■□□□□ 0.56
Tpm1-205ENSMUST00000113685 Frmpd1A2AKB4 1549 aa18.54■□□□□ 0.56
Tpm1-205ENSMUST00000113685 Ccdc136Q3TVA9 1136 aa18.54■□□□□ 0.56
Tpm1-205ENSMUST00000113685 CftrP26361 1476 aa18.53■□□□□ 0.56
Tpm1-205ENSMUST00000113685 Cttnbp2B9EJA2 1648 aa18.53■□□□□ 0.56
Tpm1-205ENSMUST00000113685 Fam135aQ6NS59 1506 aa18.51■□□□□ 0.55
Tpm1-205ENSMUST00000113685 Phldb1Q6PDH0 1371 aaKnown RBP18.5■□□□□ 0.55
Tpm1-205ENSMUST00000113685 Trim41Q5NCC3 630 aa18.47■□□□□ 0.55
Tpm1-205ENSMUST00000113685 Synj1Q8CHC4 1574 aa18.44■□□□□ 0.54
Tpm1-205ENSMUST00000113685 Esf1Q3V1V3 845 aaKnown RBP18.29■□□□□ 0.52
Tpm1-205ENSMUST00000113685 Ubl4bQ9CQ84 188 aa18.29■□□□□ 0.52
Tpm1-205ENSMUST00000113685 Unc13aQ4KUS2 1712 aa18.2■□□□□ 0.5
Tpm1-205ENSMUST00000113685 Mrc2Q64449 1479 aa18.11■□□□□ 0.49
Tpm1-205ENSMUST00000113685 Rsf1E9PWW9 1441 aaKnown RBP18.1■□□□□ 0.49
Tpm1-205ENSMUST00000113685 Chic1Q8CBW7 227 aa18.04■□□□□ 0.48
Tpm1-205ENSMUST00000113685 Golga3P55937 1487 aa18■□□□□ 0.47
Tpm1-205ENSMUST00000113685 Kif15Q6P9L6 1387 aa17.99■□□□□ 0.47
Tpm1-205ENSMUST00000113685 Lamc3Q9R0B6 1581 aa17.96■□□□□ 0.47
Tpm1-205ENSMUST00000113685 Cux2P70298 1426 aa17.92■□□□□ 0.46
Tpm1-205ENSMUST00000113685 Top2bQ64511 1612 aa17.9■□□□□ 0.46
Tpm1-205ENSMUST00000113685 Cngb1E1AZ71 1325 aa17.88■□□□□ 0.45
Tpm1-205ENSMUST00000113685 Npm1Q61937 292 aaKnown RBP17.84■□□□□ 0.45
Tpm1-205ENSMUST00000113685 Cep164Q5DU05 1446 aa17.8■□□□□ 0.44
Tpm1-205ENSMUST00000113685 TnnQ80Z71 1560 aa17.79■□□□□ 0.44
Tpm1-205ENSMUST00000113685 Fmn1Q05860 1466 aa17.78■□□□□ 0.44
Tpm1-205ENSMUST00000113685 Ccdc18Q640L5 1455 aa17.78■□□□□ 0.44
Tpm1-205ENSMUST00000113685 Kif21aQ9QXL2 1672 aa17.66■□□□□ 0.42
Tpm1-205ENSMUST00000113685 Camsap1A2AHC3 1581 aa17.63■□□□□ 0.41
Tpm1-205ENSMUST00000113685 Lrriq1Q0P5X1 1673 aa17.61■□□□□ 0.41
Tpm1-205ENSMUST00000113685 LrpprcQ6PB66 1392 aaKnown RBP17.61■□□□□ 0.41
Tpm1-205ENSMUST00000113685 Il27Q8K3I6 234 aa17.6■□□□□ 0.41
Tpm1-205ENSMUST00000113685 Dhx29Q6PGC1 1365 aaKnown RBP17.56■□□□□ 0.4
Tpm1-205ENSMUST00000113685 PogzQ8BZH4 1409 aaKnown RBP17.5■□□□□ 0.39
Tpm1-205ENSMUST00000113685 Crocc2F6XLV1 1638 aa17.48■□□□□ 0.39
Tpm1-205ENSMUST00000113685 Grin2bQ01097 1482 aa17.44■□□□□ 0.38
Tpm1-205ENSMUST00000113685 Ccdc88bQ4QRL3 1481 aa17.44■□□□□ 0.38
Tpm1-205ENSMUST00000113685 Urb2E9Q7L1 1524 aaKnown RBP17.43■□□□□ 0.38
Tpm1-205ENSMUST00000113685 HrcG5E8J6 738 aa17.43■□□□□ 0.38
Tpm1-205ENSMUST00000113685 Plb1Q3TTY0 1478 aa17.43■□□□□ 0.38
Tpm1-205ENSMUST00000113685 Eif4g3Q80XI3 1579 aaKnown RBP17.42■□□□□ 0.38
Tpm1-205ENSMUST00000113685 Top2aQ01320 1528 aaKnown RBP17.42■□□□□ 0.38
Tpm1-205ENSMUST00000113685 Efcab5A0JP43 1406 aa17.4■□□□□ 0.38
Tpm1-205ENSMUST00000113685 Duox2A2AQ99 1517 aa17.4■□□□□ 0.38
Tpm1-205ENSMUST00000113685 Ift140E9PY46 1464 aa17.39■□□□□ 0.37
Tpm1-205ENSMUST00000113685 NrkQ9R0G8 1455 aa17.36■□□□□ 0.37
Tpm1-205ENSMUST00000113685 Pbrm1Q8BSQ9 1634 aaKnown RBP17.25■□□□□ 0.35
Tpm1-205ENSMUST00000113685 Shroom4Q1W617 1475 aa17.23■□□□□ 0.35
Tpm1-205ENSMUST00000113685 Dnajc5P60904 198 aa17.22■□□□□ 0.35
Tpm1-205ENSMUST00000113685 Disp1Q3TDN0 1521 aa17.21■□□□□ 0.34
Tpm1-205ENSMUST00000113685 Rusc2Q80U22 1514 aa17.21■□□□□ 0.34
Tpm1-205ENSMUST00000113685 Cc2d2bA0A286YDU8 1405 aa17.2■□□□□ 0.34
Tpm1-205ENSMUST00000113685 Samd9lQ69Z37 1561 aa17.19■□□□□ 0.34
Tpm1-205ENSMUST00000113685 Nup160Q9Z0W3 1402 aaKnown RBP17.15■□□□□ 0.34
Tpm1-205ENSMUST00000113685 Shroom2A2ALU4 1481 aa17.13■□□□□ 0.33
Tpm1-205ENSMUST00000113685 Npm2Q80W85 207 aa17.12■□□□□ 0.33
Tpm1-205ENSMUST00000113685 PtprkP35822 1457 aa17.11■□□□□ 0.33
Tpm1-205ENSMUST00000113685 Zeb1Q64318 1117 aa17.1■□□□□ 0.33
Tpm1-205ENSMUST00000113685 Grin2aP35436 1464 aa17.09■□□□□ 0.33
Tpm1-205ENSMUST00000113685 SynmQ70IV5 1561 aa17.09■□□□□ 0.33
Tpm1-205ENSMUST00000113685 Rad54l2Q99NG0 1466 aa17.08■□□□□ 0.32
Tpm1-205ENSMUST00000113685 Magi3Q9EQJ9 1476 aa17.05■□□□□ 0.32
Tpm1-205ENSMUST00000113685 Pabpn1Q8CCS6 302 aaKnown RBP17.04■□□□□ 0.32
Tpm1-205ENSMUST00000113685 Gpatch8A2A6A1 1505 aa17.04■□□□□ 0.32
Tpm1-205ENSMUST00000113685 AqrQ8CFQ3 1481 aaKnown RBP17.04■□□□□ 0.32
Tpm1-205ENSMUST00000113685 Mroh2bQ7M6Y6 1581 aa17.02■□□□□ 0.32
Tpm1-205ENSMUST00000113685 Setd1bQ8CFT2 1985 aa17.01■□□□□ 0.31
Tpm1-205ENSMUST00000113685 Pelp1Q9DBD5 1123 aaKnown RBP16.98■□□□□ 0.31
Tpm1-205ENSMUST00000113685 Rapgef2Q8CHG7 1496 aa16.98■□□□□ 0.31
Tpm1-205ENSMUST00000113685 Gab3Q8BSM5 595 aa16.97■□□□□ 0.31
Tpm1-205ENSMUST00000113685 Pla2r1Q62028 1487 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms