RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 UqcrqQ9CQ69 82 aa17.1■□□□□ 0.33
Ctdnep1-201ENSMUST00000108593 Gm37013Q8K491 104 aa17.09■□□□□ 0.33
Ctdnep1-201ENSMUST00000108593 Mrpl34Q99N91 92 aa17.09■□□□□ 0.33
Ctdnep1-201ENSMUST00000108593 Ormdl1Q921I0 153 aa17.07■□□□□ 0.32
Ctdnep1-201ENSMUST00000108593 Lyrm7Q9DA03 104 aa17.06■□□□□ 0.32
Ctdnep1-201ENSMUST00000108593 Cdip1Q9DB75 208 aa17.04■□□□□ 0.32
Ctdnep1-201ENSMUST00000108593 C130032M10RikQ8C888 123 aa17.03■□□□□ 0.32
Ctdnep1-201ENSMUST00000108593 Gm5767A0A0J9YTU8 78 aa16.99■□□□□ 0.31
Ctdnep1-201ENSMUST00000108593 Trav3-1Q5R1I8 114 aa16.99■□□□□ 0.31
Ctdnep1-201ENSMUST00000108593 Cypt15B1AXS0 87 aa16.94■□□□□ 0.3
Ctdnep1-201ENSMUST00000108593 Prm1P02319 51 aa16.93■□□□□ 0.3
Ctdnep1-201ENSMUST00000108593 Gm11939A2A592 99 aa16.91■□□□□ 0.3
Ctdnep1-201ENSMUST00000108593 Defa21Q8C1P2 93 aa16.83■□□□□ 0.28
Ctdnep1-201ENSMUST00000108593 Reg3aO09037 175 aa16.81■□□□□ 0.28
Ctdnep1-201ENSMUST00000108593 BatfO35284 125 aa16.81■□□□□ 0.28
Ctdnep1-201ENSMUST00000108593 Gm7735D3YX18 52 aa16.8■□□□□ 0.28
Ctdnep1-201ENSMUST00000108593 Ubl5Q9EPV8 73 aa16.78■□□□□ 0.28
Ctdnep1-201ENSMUST00000108593 Gm9789Q8BIG3 52 aa16.78■□□□□ 0.28
Ctdnep1-201ENSMUST00000108593 Gm26620Q9CY65 116 aa16.76■□□□□ 0.27
Ctdnep1-201ENSMUST00000108593 MplkipQ9D011 178 aa16.76■□□□□ 0.27
Ctdnep1-201ENSMUST00000108593 Ush2AQ2QI47 5193 aa16.75■□□□□ 0.27
Ctdnep1-201ENSMUST00000108593 Gm9821Q8K076 103 aa16.7■□□□□ 0.26
Ctdnep1-201ENSMUST00000108593 Igkv3-3A0A140T8Q0 119 aa16.63■□□□□ 0.25
Ctdnep1-201ENSMUST00000108593 Tmem254aP0DN89 123 aa16.59■□□□□ 0.25
Ctdnep1-201ENSMUST00000108593 Tmem254bP0DN90 123 aa16.59■□□□□ 0.25
Ctdnep1-201ENSMUST00000108593 Tmem254cP0DN91 123 aa16.59■□□□□ 0.25
Ctdnep1-201ENSMUST00000108593 Igkv8-19A0A0G2JFN8 121 aa16.59■□□□□ 0.25
Ctdnep1-201ENSMUST00000108593 Krtap15-1Q9QZU5 150 aa16.55■□□□□ 0.24
Ctdnep1-201ENSMUST00000108593 BikO70337 150 aa16.52■□□□□ 0.23
Ctdnep1-201ENSMUST00000108593 Hmcn2A2AJ76 5100 aa16.49■□□□□ 0.23
Ctdnep1-201ENSMUST00000108593 Atp5eP56382 52 aa16.46■□□□□ 0.23
Ctdnep1-201ENSMUST00000108593 Defb13Q8R2I4 64 aa16.43■□□□□ 0.22
Ctdnep1-201ENSMUST00000108593 Rpl37Q9D823 97 aa16.37■□□□□ 0.21
Ctdnep1-201ENSMUST00000108593 Gm10267M0QWD8 85 aa16.36■□□□□ 0.21
Ctdnep1-201ENSMUST00000108593 Hist1h4aP62806 103 aaKnown RBP16.35■□□□□ 0.21
Ctdnep1-201ENSMUST00000108593 Scgb1b2O35176 93 aa16.34■□□□□ 0.21
Ctdnep1-201ENSMUST00000108593 Ubr4A2AN08 5180 aa16.33■□□□□ 0.2
Ctdnep1-201ENSMUST00000108593 Prr15lQ8JZM2 100 aa16.32■□□□□ 0.2
Ctdnep1-201ENSMUST00000108593 Sec61bQ9CQS8 96 aaKnown RBP16.32■□□□□ 0.2
Ctdnep1-201ENSMUST00000108593 4932415D10RikA0A1W2P6U8 4986 aa16.27■□□□□ 0.2
Ctdnep1-201ENSMUST00000108593 Anapc13Q8R034 74 aa16.27■□□□□ 0.19
Ctdnep1-201ENSMUST00000108593 2310057N15RikQ9D6T8 200 aa16.22■□□□□ 0.19
Ctdnep1-201ENSMUST00000108593 A0A286YE49 62 aa16.14■□□□□ 0.17
Ctdnep1-201ENSMUST00000108593 7530416G11RikJ3QJX6 159 aa16.09■□□□□ 0.17
Ctdnep1-201ENSMUST00000108593 Samd13D3YUG0 102 aa16.08■□□□□ 0.17
Ctdnep1-201ENSMUST00000108593 Ndufc1Q9CQY9 76 aa16.08■□□□□ 0.17
Ctdnep1-201ENSMUST00000108593 Krtap3-2Q9D638 99 aa16.08■□□□□ 0.17
Ctdnep1-201ENSMUST00000108593 Krtap3-3Q9D7P0 99 aa16.08■□□□□ 0.17
Ctdnep1-201ENSMUST00000108593 2310034C09RikQ9D746 214 aa16.08■□□□□ 0.16
Ctdnep1-201ENSMUST00000108593 Fam229bQ8CF36 80 aa16.06■□□□□ 0.16
Ctdnep1-201ENSMUST00000108593 Spink8Q09TK9 105 aa16.01■□□□□ 0.15
Ctdnep1-201ENSMUST00000108593 Rnase13Q5GAM7 153 aa15.98■□□□□ 0.15
Ctdnep1-201ENSMUST00000108593 Krtap1-3A2A588 173 aa15.97■□□□□ 0.15
Ctdnep1-201ENSMUST00000108593 Naa38Q9D2U5 125 aa15.97■□□□□ 0.15
Ctdnep1-201ENSMUST00000108593 Apoc4Q61268 124 aa15.97■□□□□ 0.15
Ctdnep1-201ENSMUST00000108593 4930518I15RikQ3V2W7 57 aa15.87■□□□□ 0.13
Ctdnep1-201ENSMUST00000108593 Serp2Q6TAW2 65 aa15.83■□□□□ 0.12
Ctdnep1-201ENSMUST00000108593 Crct1Q6PAI5 102 aa15.82■□□□□ 0.12
Ctdnep1-201ENSMUST00000108593 1700074P13RikQ9D9G7 251 aa15.79■□□□□ 0.12
Ctdnep1-201ENSMUST00000108593 Gm4491E0CX42 125 aa15.77■□□□□ 0.12
Ctdnep1-201ENSMUST00000108593 ZanO88799 5376 aa15.69■□□□□ 0.1
Ctdnep1-201ENSMUST00000108593 Gm17416Q30KP4 66 aa15.65■□□□□ 0.1
Ctdnep1-201ENSMUST00000108593 Gm28539A0A087WSL9 92 aa15.64■□□□□ 0.09
Ctdnep1-201ENSMUST00000108593 Krtap16-3Q8C1I6 86 aa15.64■□□□□ 0.09
Ctdnep1-201ENSMUST00000108593 Krtap19-1Q925H2 87 aa15.57■□□□□ 0.08
Ctdnep1-201ENSMUST00000108593 B230307C23RikQ8BLB2 64 aa15.57■□□□□ 0.08
Ctdnep1-201ENSMUST00000108593 Krtap19-3Q925H6 87 aa15.55■□□□□ 0.08
Ctdnep1-201ENSMUST00000108593 Prr13Q9CQJ5 137 aa15.53■□□□□ 0.08
Ctdnep1-201ENSMUST00000108593 LorP18165 486 aa15.5■□□□□ 0.07
Ctdnep1-201ENSMUST00000108593 Q8BGJ3 129 aa15.5■□□□□ 0.07
Ctdnep1-201ENSMUST00000108593 Fam229aB2KGE5 128 aa15.49■□□□□ 0.07
Ctdnep1-201ENSMUST00000108593 Gm10999F6Q4M4 69 aa15.47■□□□□ 0.07
Ctdnep1-201ENSMUST00000108593 Fat4Q2PZL6 4981 aa15.46■□□□□ 0.06
Ctdnep1-201ENSMUST00000108593 9230102O04RikA2ASX7 82 aa15.41■□□□□ 0.06
Ctdnep1-201ENSMUST00000108593 Atox1O08997 68 aaKnown RBP15.41■□□□□ 0.06
Ctdnep1-201ENSMUST00000108593 Krtap4-1Q3UUY3 169 aa15.4■□□□□ 0.06
Ctdnep1-201ENSMUST00000108593 Coa6Q8BGD8 79 aa15.39■□□□□ 0.05
Ctdnep1-201ENSMUST00000108593 Defb38Q7TNV7 63 aa15.35■□□□□ 0.05
Ctdnep1-201ENSMUST00000108593 Spint4Q9D263 159 aa15.35■□□□□ 0.05
Ctdnep1-201ENSMUST00000108593 Gm10318A0A1W2P728 225 aa15.34■□□□□ 0.05
Ctdnep1-201ENSMUST00000108593 1700042G07RikB1AUF7 90 aa15.32■□□□□ 0.04
Ctdnep1-201ENSMUST00000108593 Rnf213E9Q555 5152 aaKnown RBP15.28■□□□□ 0.04
Ctdnep1-201ENSMUST00000108593 Gm19402J3QJV4 266 aa15.27■□□□□ 0.03
Ctdnep1-201ENSMUST00000108593 Chtf8P0CG14 533 aa15.26■□□□□ 0.03
Ctdnep1-201ENSMUST00000108593 4930507D05RikQ8C9C9 103 aa15.21■□□□□ 0.03
Ctdnep1-201ENSMUST00000108593 Gm21798J3QNU5 87 aa15.18■□□□□ 0.02
Ctdnep1-201ENSMUST00000108593 Krtap1-4Q3V2D6 188 aa15.18■□□□□ 0.02
Ctdnep1-201ENSMUST00000108593 2310079G19RikQ9D6L6 185 aa15.16■□□□□ 0.02
Ctdnep1-201ENSMUST00000108593 Tmem258P61166 79 aa15.15■□□□□ 0.02
Ctdnep1-201ENSMUST00000108593 Gm10160F6Y577 67 aa15.13■□□□□ 0.01
Ctdnep1-201ENSMUST00000108593 Krtap13-1Q8K198 168 aa15.12■□□□□ 0.01
Ctdnep1-201ENSMUST00000108593 2210017I01RikA0A0A6YVV1 95 aa15.09■□□□□ 0.01
Ctdnep1-201ENSMUST00000108593 Smlr1J3QMJ4 66 aa15.08■□□□□ 0
Ctdnep1-201ENSMUST00000108593 Gm19935A0A1B0GSF9 52 aa14.99□□□□□ -0.01
Ctdnep1-201ENSMUST00000108593 Coa5Q99M07 74 aa14.99□□□□□ -0.01
Ctdnep1-201ENSMUST00000108593 SmcpP15265 143 aa14.98□□□□□ -0.01
Ctdnep1-201ENSMUST00000108593 Krtap1-5A2A590 122 aa14.92□□□□□ -0.02
Ctdnep1-201ENSMUST00000108593 Pet100P0DJE0 76 aa14.92□□□□□ -0.02
Ctdnep1-201ENSMUST00000108593 SnurfQ9WU12 71 aa14.91□□□□□ -0.02
Ctdnep1-201ENSMUST00000108593 Gm10643Q3URG9 111 aa14.9□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 134 ms