RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Gm35339A0A140LHH9 1649 aa67.29■■■■■ 8.36
Ctdnep1-201ENSMUST00000108593 NischQ80TM9 1593 aa66.77■■■■■ 8.28
Ctdnep1-201ENSMUST00000108593 Abcc9P70170 1546 aa64.69■■■■■ 7.95
Ctdnep1-201ENSMUST00000108593 Abcc8B2RUS7 1588 aa64.36■■■■■ 7.89
Ctdnep1-201ENSMUST00000108593 ScribQ80U72 1612 aa61.54■■■■■ 7.44
Ctdnep1-201ENSMUST00000108593 NacadQ5SWP3 1504 aa59.8■■■■■ 7.16
Ctdnep1-201ENSMUST00000108593 Kdm5dQ62240 1548 aa59.72■■■■■ 7.15
Ctdnep1-201ENSMUST00000108593 Dcaf1Q80TR8 1506 aa59.52■■■■■ 7.12
Ctdnep1-201ENSMUST00000108593 Sycp2Q9CUU3 1500 aa58.59■■■■■ 6.97
Ctdnep1-201ENSMUST00000108593 Rhox8Q6VSS7 320 aa58.45■■■■■ 6.95
Ctdnep1-201ENSMUST00000108593 Rb1cc1Q9ESK9 1588 aa58.23■■■■■ 6.91
Ctdnep1-201ENSMUST00000108593 BicraF8VPZ9 1578 aa57.6■■■■■ 6.81
Ctdnep1-201ENSMUST00000108593 Ccdc180J3QNE4 1664 aa57.58■■■■■ 6.81
Ctdnep1-201ENSMUST00000108593 Baz1aO88379 1555 aa57.51■■■■■ 6.8
Ctdnep1-201ENSMUST00000108593 Crybg2B7ZCC2 1516 aa57.28■■■■■ 6.76
Ctdnep1-201ENSMUST00000108593 Zcchc6Q5BLK4 1491 aaKnown RBP56.52■■■■■ 6.64
Ctdnep1-201ENSMUST00000108593 Pds5bQ4VA53 1446 aaKnown RBP55.92■■■■■ 6.54
Ctdnep1-201ENSMUST00000108593 Smarca2Q6DIC0 1577 aa55.89■■■■■ 6.54
Ctdnep1-201ENSMUST00000108593 Atad2bE9Q166 1460 aaKnown RBP55.54■■■■■ 6.48
Ctdnep1-201ENSMUST00000108593 Rtl1Q7M732 1744 aa55.53■■■■■ 6.48
Ctdnep1-201ENSMUST00000108593 Cecr2E9Q2Z1 1453 aa55.41■■■■■ 6.46
Ctdnep1-201ENSMUST00000108593 Smarca4Q3TKT4 1613 aaKnown RBP55.32■■■■■ 6.45
Ctdnep1-201ENSMUST00000108593 Thoc2B1AZI6 1594 aaKnown RBP55.08■■■■■ 6.41
Ctdnep1-201ENSMUST00000108593 Dnajc5bQ9CQ94 199 aa54.92■■■■■ 6.38
Ctdnep1-201ENSMUST00000108593 Iqgap2Q3UQ44 1575 aa54.9■■■■■ 6.38
Ctdnep1-201ENSMUST00000108593 Ercc6F8VPZ5 1481 aa54.71■■■■■ 6.35
Ctdnep1-201ENSMUST00000108593 Ccdc136Q3TVA9 1136 aa54.59■■■■■ 6.33
Ctdnep1-201ENSMUST00000108593 Brd4Q9ESU6 1400 aaKnown RBP54.44■■■■■ 6.3
Ctdnep1-201ENSMUST00000108593 Wdr62Q3U3T8 1523 aa54.34■■■■■ 6.29
Ctdnep1-201ENSMUST00000108593 CftrP26361 1476 aa54.33■■■■■ 6.29
Ctdnep1-201ENSMUST00000108593 Frmpd1A2AKB4 1549 aa54.28■■■■■ 6.28
Ctdnep1-201ENSMUST00000108593 Synj1Q8CHC4 1574 aa54.22■■■■■ 6.27
Ctdnep1-201ENSMUST00000108593 Cc2d2aQ8CFW7 1633 aa54.22■■■■■ 6.27
Ctdnep1-201ENSMUST00000108593 Cttnbp2B9EJA2 1648 aa54.19■■■■■ 6.26
Ctdnep1-201ENSMUST00000108593 Fam135aQ6NS59 1506 aa54.01■■■■■ 6.24
Ctdnep1-201ENSMUST00000108593 Trim41Q5NCC3 630 aa53.89■■■■■ 6.22
Ctdnep1-201ENSMUST00000108593 Phldb1Q6PDH0 1371 aaKnown RBP53.86■■■■■ 6.21
Ctdnep1-201ENSMUST00000108593 Baz1bQ9Z277 1479 aa53.51■■■■■ 6.16
Ctdnep1-201ENSMUST00000108593 Unc13aQ4KUS2 1712 aa53.43■■■■■ 6.14
Ctdnep1-201ENSMUST00000108593 Esf1Q3V1V3 845 aaKnown RBP53.42■■■■■ 6.14
Ctdnep1-201ENSMUST00000108593 Ubl4bQ9CQ84 188 aa53.32■■■■■ 6.13
Ctdnep1-201ENSMUST00000108593 Rsf1E9PWW9 1441 aaKnown RBP52.79■■■■■ 6.04
Ctdnep1-201ENSMUST00000108593 Mrc2Q64449 1479 aa52.77■■■■■ 6.04
Ctdnep1-201ENSMUST00000108593 Golga3P55937 1487 aa52.77■■■■■ 6.04
Ctdnep1-201ENSMUST00000108593 Kif15Q6P9L6 1387 aa52.61■■■■■ 6.01
Ctdnep1-201ENSMUST00000108593 Top2bQ64511 1612 aa52.56■■■■■ 6
Ctdnep1-201ENSMUST00000108593 Lamc3Q9R0B6 1581 aa52.55■■■■■ 6
Ctdnep1-201ENSMUST00000108593 Cngb1E1AZ71 1325 aa52.48■■■■■ 5.99
Ctdnep1-201ENSMUST00000108593 Cux2P70298 1426 aa52.41■■■■■ 5.98
Ctdnep1-201ENSMUST00000108593 TnnQ80Z71 1560 aa52.17■■■■■ 5.94
Ctdnep1-201ENSMUST00000108593 Fmn1Q05860 1466 aa52.02■■■■■ 5.92
Ctdnep1-201ENSMUST00000108593 Npm1Q61937 292 aaKnown RBP51.95■■■■■ 5.91
Ctdnep1-201ENSMUST00000108593 Cep164Q5DU05 1446 aa51.81■■■■■ 5.88
Ctdnep1-201ENSMUST00000108593 Ccdc18Q640L5 1455 aa51.8■■■■■ 5.88
Ctdnep1-201ENSMUST00000108593 Kif21aQ9QXL2 1672 aa51.72■■■■■ 5.87
Ctdnep1-201ENSMUST00000108593 Camsap1A2AHC3 1581 aa51.66■■■■■ 5.86
Ctdnep1-201ENSMUST00000108593 Il27Q8K3I6 234 aa51.6■■■■■ 5.85
Ctdnep1-201ENSMUST00000108593 Ccdc88bQ4QRL3 1481 aa51.5■■■■■ 5.84
Ctdnep1-201ENSMUST00000108593 Lrriq1Q0P5X1 1673 aa51.49■■■■■ 5.83
Ctdnep1-201ENSMUST00000108593 LrpprcQ6PB66 1392 aaKnown RBP51.45■■■■■ 5.83
Ctdnep1-201ENSMUST00000108593 Dhx29Q6PGC1 1365 aaKnown RBP51.36■■■■■ 5.81
Ctdnep1-201ENSMUST00000108593 Chic1Q8CBW7 227 aa51.26■■■■■ 5.8
Ctdnep1-201ENSMUST00000108593 PogzQ8BZH4 1409 aaKnown RBP51.18■■■■■ 5.78
Ctdnep1-201ENSMUST00000108593 Top2aQ01320 1528 aaKnown RBP51.14■■■■■ 5.78
Ctdnep1-201ENSMUST00000108593 HrcG5E8J6 738 aa51.1■■■■■ 5.77
Ctdnep1-201ENSMUST00000108593 Grin2bQ01097 1482 aa51.08■■■■■ 5.77
Ctdnep1-201ENSMUST00000108593 Crocc2F6XLV1 1638 aa51.07■■■■■ 5.77
Ctdnep1-201ENSMUST00000108593 Urb2E9Q7L1 1524 aaKnown RBP51.04■■■■■ 5.76
Ctdnep1-201ENSMUST00000108593 Plb1Q3TTY0 1478 aa51.02■■■■■ 5.76
Ctdnep1-201ENSMUST00000108593 Duox2A2AQ99 1517 aa50.94■■■■■ 5.75
Ctdnep1-201ENSMUST00000108593 Eif4g3Q80XI3 1579 aaKnown RBP50.79■■■■■ 5.72
Ctdnep1-201ENSMUST00000108593 Efcab5A0JP43 1406 aa50.78■■■■■ 5.72
Ctdnep1-201ENSMUST00000108593 NrkQ9R0G8 1455 aa50.75■■■■■ 5.72
Ctdnep1-201ENSMUST00000108593 Ift140E9PY46 1464 aa50.65■■■■■ 5.7
Ctdnep1-201ENSMUST00000108593 Shroom4Q1W617 1475 aa50.5■■■■■ 5.67
Ctdnep1-201ENSMUST00000108593 Samd9lQ69Z37 1561 aa50.48■■■■■ 5.67
Ctdnep1-201ENSMUST00000108593 PtprkP35822 1457 aa50.45■■■■■ 5.67
Ctdnep1-201ENSMUST00000108593 Disp1Q3TDN0 1521 aa50.41■■■■■ 5.66
Ctdnep1-201ENSMUST00000108593 Rusc2Q80U22 1514 aa50.24■■■■■ 5.63
Ctdnep1-201ENSMUST00000108593 Rad54l2Q99NG0 1466 aa50.17■■■■■ 5.62
Ctdnep1-201ENSMUST00000108593 Nup160Q9Z0W3 1402 aaKnown RBP50.17■■■■■ 5.62
Ctdnep1-201ENSMUST00000108593 Pbrm1Q8BSQ9 1634 aaKnown RBP50.16■■■■■ 5.62
Ctdnep1-201ENSMUST00000108593 Cc2d2bA0A286YDU8 1405 aa50.08■■■■■ 5.61
Ctdnep1-201ENSMUST00000108593 Gab3Q8BSM5 595 aa50.07■■■■■ 5.61
Ctdnep1-201ENSMUST00000108593 Npm2Q80W85 207 aa50.06■■■■■ 5.6
Ctdnep1-201ENSMUST00000108593 Magi3Q9EQJ9 1476 aa50.03■■■■■ 5.6
Ctdnep1-201ENSMUST00000108593 Grin2aP35436 1464 aa50.01■■■■■ 5.6
Ctdnep1-201ENSMUST00000108593 SynmQ70IV5 1561 aa50■■■■■ 5.59
Ctdnep1-201ENSMUST00000108593 Setd1bQ8CFT2 1985 aa49.96■■■■■ 5.59
Ctdnep1-201ENSMUST00000108593 Rapgef2Q8CHG7 1496 aa49.92■■■■■ 5.58
Ctdnep1-201ENSMUST00000108593 Zeb1Q64318 1117 aa49.92■■■■■ 5.58
Ctdnep1-201ENSMUST00000108593 Mroh2bQ7M6Y6 1581 aa49.89■■■■■ 5.58
Ctdnep1-201ENSMUST00000108593 Pla2r1Q62028 1487 aa49.81■■■■■ 5.56
Ctdnep1-201ENSMUST00000108593 Shroom2A2ALU4 1481 aa49.79■■■■■ 5.56
Ctdnep1-201ENSMUST00000108593 Gpatch8A2A6A1 1505 aa49.76■■■■■ 5.56
Ctdnep1-201ENSMUST00000108593 AqrQ8CFQ3 1481 aaKnown RBP49.73■■■■■ 5.55
Ctdnep1-201ENSMUST00000108593 Arhgap35Q91YM2 1499 aa49.67■■■■■ 5.54
Ctdnep1-201ENSMUST00000108593 Map3k1P53349 1493 aa49.63■■■■■ 5.53
Ctdnep1-201ENSMUST00000108593 Cep162Q6ZQ06 1403 aa49.61■■■■■ 5.53
Ctdnep1-201ENSMUST00000108593 Eif4g1Q6NZJ6 1600 aaKnown RBP49.55■■■■■ 5.52
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms