RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Gm10267M0QWD8 85 aa10.05□□□□□ -0.8
Sec61a1-201ENSMUST00000032168 Spint4Q9D263 159 aa10.05□□□□□ -0.8
Sec61a1-201ENSMUST00000032168 Gm20604F8WIA3 75 aa10.04□□□□□ -0.8
Sec61a1-201ENSMUST00000032168 Znf706Q9D115 76 aaKnown RBP10.04□□□□□ -0.8
Sec61a1-201ENSMUST00000032168 Dnah2P0C6F1 4456 aa10.02□□□□□ -0.8
Sec61a1-201ENSMUST00000032168 Smlr1J3QMJ4 66 aa10.02□□□□□ -0.81
Sec61a1-201ENSMUST00000032168 Atox1O08997 68 aaKnown RBP10□□□□□ -0.81
Sec61a1-201ENSMUST00000032168 Serp1Q9Z1W5 66 aa10□□□□□ -0.81
Sec61a1-201ENSMUST00000032168 ApobE9Q414 4505 aa9.99□□□□□ -0.81
Sec61a1-201ENSMUST00000032168 Gm28374F6SG70 93 aa9.98□□□□□ -0.81
Sec61a1-201ENSMUST00000032168 Ccdc179J3QM76 67 aa9.98□□□□□ -0.81
Sec61a1-201ENSMUST00000032168 Bean1Q9EQG5 255 aa9.98□□□□□ -0.81
Sec61a1-201ENSMUST00000032168 Gm16253D3Z167 63 aa9.97□□□□□ -0.81
Sec61a1-201ENSMUST00000032168 Defb38Q7TNV7 63 aa9.96□□□□□ -0.81
Sec61a1-201ENSMUST00000032168 Spaca4Q80ZQ0 127 aa9.95□□□□□ -0.82
Sec61a1-201ENSMUST00000032168 Coa5Q99M07 74 aa9.94□□□□□ -0.82
Sec61a1-201ENSMUST00000032168 A530084C06RikQ3UTW2 186 aa9.93□□□□□ -0.82
Sec61a1-201ENSMUST00000032168 Chtf8P0CG14 533 aa9.91□□□□□ -0.82
Sec61a1-201ENSMUST00000032168 Pkhd1E9PZ36 4059 aa9.9□□□□□ -0.82
Sec61a1-201ENSMUST00000032168 Dph3Q8K0W9 82 aa9.88□□□□□ -0.83
Sec61a1-201ENSMUST00000032168 Ryr3A2AGL3 4863 aa9.88□□□□□ -0.83
Sec61a1-201ENSMUST00000032168 Igkv3-3A0A140T8Q0 119 aa9.87□□□□□ -0.83
Sec61a1-201ENSMUST00000032168 OxtP35454 125 aa9.87□□□□□ -0.83
Sec61a1-201ENSMUST00000032168 Fat1A0A1L1SQU7 4645 aa9.87□□□□□ -0.83
Sec61a1-201ENSMUST00000032168 SvipQ3UZP4 77 aa9.86□□□□□ -0.83
Sec61a1-201ENSMUST00000032168 Wfdc3Q14AE4 130 aa9.86□□□□□ -0.83
Sec61a1-201ENSMUST00000032168 Gm10197F6QEY5 67 aa9.84□□□□□ -0.83
Sec61a1-201ENSMUST00000032168 Cdc42se1Q8BHL7 80 aa9.82□□□□□ -0.84
Sec61a1-201ENSMUST00000032168 Dync1h1Q9JHU4 4644 aaKnown RBP9.78□□□□□ -0.84
Sec61a1-201ENSMUST00000032168 Cypt15B1AXS0 87 aa9.78□□□□□ -0.84
Sec61a1-201ENSMUST00000032168 Defb13Q8R2I4 64 aa9.77□□□□□ -0.84
Sec61a1-201ENSMUST00000032168 H2al1aQ5M8Q2 105 aa9.76□□□□□ -0.85
Sec61a1-201ENSMUST00000032168 Gm10160F6Y577 67 aa9.74□□□□□ -0.85
Sec61a1-201ENSMUST00000032168 RetnlbQ99P86 105 aa9.73□□□□□ -0.85
Sec61a1-201ENSMUST00000032168 Fat2Q5F226 4351 aa9.72□□□□□ -0.85
Sec61a1-201ENSMUST00000032168 Mrpl55Q9CZ83 127 aa9.67□□□□□ -0.86
Sec61a1-201ENSMUST00000032168 Gm21798J3QNU5 87 aa9.62□□□□□ -0.87
Sec61a1-201ENSMUST00000032168 SacsQ9JLC8 4582 aa9.6□□□□□ -0.87
Sec61a1-201ENSMUST00000032168 Lrp1Q91ZX7 4545 aaKnown RBP9.58□□□□□ -0.88
Sec61a1-201ENSMUST00000032168 Phxr4P15974 95 aa9.56□□□□□ -0.88
Sec61a1-201ENSMUST00000032168 Gm10999F6Q4M4 69 aa9.51□□□□□ -0.89
Sec61a1-201ENSMUST00000032168 Gm20661K7N787 53 aa9.51□□□□□ -0.89
Sec61a1-201ENSMUST00000032168 Gm10337F7DEP7 55 aa9.49□□□□□ -0.89
Sec61a1-201ENSMUST00000032168 Pkhd1l1Q80ZA4 4249 aa9.48□□□□□ -0.89
Sec61a1-201ENSMUST00000032168 H2al1eQ810S6 105 aa9.47□□□□□ -0.89
Sec61a1-201ENSMUST00000032168 Ryr2E9Q401 4966 aaKnown RBP9.46□□□□□ -0.9
Sec61a1-201ENSMUST00000032168 Kmt2cQ8BRH4 4903 aa9.44□□□□□ -0.9
Sec61a1-201ENSMUST00000032168 Q8BGJ3 129 aa9.43□□□□□ -0.9
Sec61a1-201ENSMUST00000032168 H2al1bA0A087WP11 105 aa9.41□□□□□ -0.9
Sec61a1-201ENSMUST00000032168 H2al1kJ3QP08 105 aa9.38□□□□□ -0.91
Sec61a1-201ENSMUST00000032168 H2al1mQ9DAD9 105 aa9.38□□□□□ -0.91
Sec61a1-201ENSMUST00000032168 Krtap3-2Q9D638 99 aa9.37□□□□□ -0.91
Sec61a1-201ENSMUST00000032168 Krtap3-3Q9D7P0 99 aa9.37□□□□□ -0.91
Sec61a1-201ENSMUST00000032168 Vps13bQ80TY5 3993 aa9.37□□□□□ -0.91
Sec61a1-201ENSMUST00000032168 2310034C09RikQ9D746 214 aa9.36□□□□□ -0.91
Sec61a1-201ENSMUST00000032168 Defb1P56386 69 aa9.36□□□□□ -0.91
Sec61a1-201ENSMUST00000032168 Gm11939A2A592 99 aa9.33□□□□□ -0.92
Sec61a1-201ENSMUST00000032168 Gm10643Q3URG9 111 aa9.32□□□□□ -0.92
Sec61a1-201ENSMUST00000032168 Gm26620Q9CY65 116 aa9.32□□□□□ -0.92
Sec61a1-201ENSMUST00000032168 SptssbQ925E8 76 aa9.3□□□□□ -0.92
Sec61a1-201ENSMUST00000032168 4933415A04RikQ9D443 101 aa9.3□□□□□ -0.92
Sec61a1-201ENSMUST00000032168 Abca13Q5SSE9 5034 aa9.28□□□□□ -0.92
Sec61a1-201ENSMUST00000032168 Gm9736A0A1W2P7N1 277 aa9.28□□□□□ -0.92
Sec61a1-201ENSMUST00000032168 Krtap19-5O08632 62 aa9.27□□□□□ -0.93
Sec61a1-201ENSMUST00000032168 2310079G19RikQ9D6L6 185 aa9.27□□□□□ -0.93
Sec61a1-201ENSMUST00000032168 Mycbp2Q7TPH6 4711 aa9.25□□□□□ -0.93
Sec61a1-201ENSMUST00000032168 Fat3Q8BNA6 4555 aa9.24□□□□□ -0.93
Sec61a1-201ENSMUST00000032168 Gm4491E0CX42 125 aa9.24□□□□□ -0.93
Sec61a1-201ENSMUST00000032168 Rps29P62274 56 aa9.22□□□□□ -0.93
Sec61a1-201ENSMUST00000032168 Ryr1E9PZQ0 5035 aa9.22□□□□□ -0.93
Sec61a1-201ENSMUST00000032168 A930033H14RikG5E8X6 103 aa9.17□□□□□ -0.94
Sec61a1-201ENSMUST00000032168 Ndufb1P0DN34 57 aa9.17□□□□□ -0.94
Sec61a1-201ENSMUST00000032168 Sox16Q62247 57 aa9.15□□□□□ -0.95
Sec61a1-201ENSMUST00000032168 Uqcr11Q9CPX8 56 aa9.12□□□□□ -0.95
Sec61a1-201ENSMUST00000032168 4930507D05RikQ8C9C9 103 aa9.11□□□□□ -0.95
Sec61a1-201ENSMUST00000032168 D6Ertd527eA0A0N4SWI3 464 aa9.1□□□□□ -0.95
Sec61a1-201ENSMUST00000032168 Dnah8Q91XQ0 4731 aa9.09□□□□□ -0.95
Sec61a1-201ENSMUST00000032168 Limd2Q8BGB5 128 aa9.08□□□□□ -0.96
Sec61a1-201ENSMUST00000032168 Gm5965D3Z724 196 aa9.06□□□□□ -0.96
Sec61a1-201ENSMUST00000032168 Gm5767A0A0J9YTU8 78 aa9.05□□□□□ -0.96
Sec61a1-201ENSMUST00000032168 Gm3646F6S692 53 aa8.97□□□□□ -0.97
Sec61a1-201ENSMUST00000032168 Krtap15-1Q9QZU5 150 aa8.97□□□□□ -0.97
Sec61a1-201ENSMUST00000032168 Kiaa1109A2AAE1 5005 aa8.95□□□□□ -0.98
Sec61a1-201ENSMUST00000032168 Herc2Q4U2R1 4836 aa8.92□□□□□ -0.98
Sec61a1-201ENSMUST00000032168 HydinQ80W93 5154 aa8.91□□□□□ -0.98
Sec61a1-201ENSMUST00000032168 Ndufs5Q99LY9 106 aa8.89□□□□□ -0.99
Sec61a1-201ENSMUST00000032168 Rnase13Q5GAM7 153 aa8.8□□□□□ -1
Sec61a1-201ENSMUST00000032168 Cox6b2Q80ZN9 88 aa8.79□□□□□ -1
Sec61a1-201ENSMUST00000032168 9230102O04RikA2ASX7 82 aa8.78□□□□□ -1
Sec61a1-201ENSMUST00000032168 Rpl37Q9D823 97 aa8.77□□□□□ -1
Sec61a1-201ENSMUST00000032168 Lrp2A2ARV4 4660 aa8.73□□□□□ -1.01
Sec61a1-201ENSMUST00000032168 Birc6O88738 4882 aa8.7□□□□□ -1.02
Sec61a1-201ENSMUST00000032168 Sec61gP60060 68 aa8.7□□□□□ -1.02
Sec61a1-201ENSMUST00000032168 Dnhd1D3Z2X2 4750 aa8.67□□□□□ -1.02
Sec61a1-201ENSMUST00000032168 PcloQ9QYX7 5068 aa8.66□□□□□ -1.02
Sec61a1-201ENSMUST00000032168 1700042G07RikB1AUF7 90 aa8.62□□□□□ -1.03
Sec61a1-201ENSMUST00000032168 Gm10382Q3V0T5 144 aa8.62□□□□□ -1.03
Sec61a1-201ENSMUST00000032168 Gm9821Q8K076 103 aa8.62□□□□□ -1.03
Sec61a1-201ENSMUST00000032168 Gm20537G3UYK7 97 aa8.59□□□□□ -1.03
Sec61a1-201ENSMUST00000032168 Gm17606F6ZL36 78 aa8.53□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 54.9 ms