RNA–Protein interactions for RNA: ENSMUST00000030905.8

Ssu72-201, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssu72, Length 1,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72-201ENSMUST00000030905 Gm17689B3GLJ4 109 aa10.07□□□□□ -0.8
Ssu72-201ENSMUST00000030905 Gm21886J3QJU9 214 aa10.07□□□□□ -0.8
Ssu72-201ENSMUST00000030905 Gm9736A0A1W2P7N1 277 aa10.06□□□□□ -0.8
Ssu72-201ENSMUST00000030905 C130032M10RikQ8C888 123 aa10.06□□□□□ -0.8
Ssu72-201ENSMUST00000030905 4930535I16RikQ9CUI2 172 aa10.06□□□□□ -0.8
Ssu72-201ENSMUST00000030905 BatfO35284 125 aa10.05□□□□□ -0.8
Ssu72-201ENSMUST00000030905 Herc1E9PZP8 4859 aa10.04□□□□□ -0.8
Ssu72-201ENSMUST00000030905 Rps29P62274 56 aa10□□□□□ -0.81
Ssu72-201ENSMUST00000030905 Lrp2A2ARV4 4660 aa10□□□□□ -0.81
Ssu72-201ENSMUST00000030905 Gm2310J3QNJ2 377 aa9.99□□□□□ -0.81
Ssu72-201ENSMUST00000030905 Atp5eP56382 52 aa9.94□□□□□ -0.82
Ssu72-201ENSMUST00000030905 Hist1h4aP62806 103 aaKnown RBP9.93□□□□□ -0.82
Ssu72-201ENSMUST00000030905 Gm11939A2A592 99 aa9.92□□□□□ -0.82
Ssu72-201ENSMUST00000030905 Reg3aO09037 175 aa9.91□□□□□ -0.82
Ssu72-201ENSMUST00000030905 Igkv8-19A0A0G2JFN8 121 aa9.9□□□□□ -0.83
Ssu72-201ENSMUST00000030905 Defa21Q8C1P2 93 aa9.85□□□□□ -0.83
Ssu72-201ENSMUST00000030905 Cypt15B1AXS0 87 aa9.81□□□□□ -0.84
Ssu72-201ENSMUST00000030905 Prr15lQ8JZM2 100 aa9.81□□□□□ -0.84
Ssu72-201ENSMUST00000030905 Ndufc1Q9CQY9 76 aa9.81□□□□□ -0.84
Ssu72-201ENSMUST00000030905 Igkv3-3A0A140T8Q0 119 aa9.79□□□□□ -0.84
Ssu72-201ENSMUST00000030905 Anapc13Q8R034 74 aa9.76□□□□□ -0.85
Ssu72-201ENSMUST00000030905 Gm5965D3Z724 196 aa9.75□□□□□ -0.85
Ssu72-201ENSMUST00000030905 BikO70337 150 aa9.75□□□□□ -0.85
Ssu72-201ENSMUST00000030905 GhrhP16043 103 aa9.75□□□□□ -0.85
Ssu72-201ENSMUST00000030905 Cystm1Q8K353 104 aa9.75□□□□□ -0.85
Ssu72-201ENSMUST00000030905 Samd13D3YUG0 102 aa9.73□□□□□ -0.85
Ssu72-201ENSMUST00000030905 A0A286YE49 62 aa9.71□□□□□ -0.86
Ssu72-201ENSMUST00000030905 A930033H14RikG5E8X6 103 aa9.7□□□□□ -0.86
Ssu72-201ENSMUST00000030905 Prm1P02319 51 aa9.7□□□□□ -0.86
Ssu72-201ENSMUST00000030905 Gm5767A0A0J9YTU8 78 aa9.69□□□□□ -0.86
Ssu72-201ENSMUST00000030905 Gm7735D3YX18 52 aa9.67□□□□□ -0.86
Ssu72-201ENSMUST00000030905 Spink8Q09TK9 105 aa9.64□□□□□ -0.87
Ssu72-201ENSMUST00000030905 Defb13Q8R2I4 64 aa9.64□□□□□ -0.87
Ssu72-201ENSMUST00000030905 Gm26620Q9CY65 116 aa9.64□□□□□ -0.87
Ssu72-201ENSMUST00000030905 Naa38Q9D2U5 125 aa9.63□□□□□ -0.87
Ssu72-201ENSMUST00000030905 Scgb1b2O35176 93 aa9.6□□□□□ -0.87
Ssu72-201ENSMUST00000030905 Fam229bQ8CF36 80 aa9.59□□□□□ -0.87
Ssu72-201ENSMUST00000030905 4930518I15RikQ3V2W7 57 aa9.56□□□□□ -0.88
Ssu72-201ENSMUST00000030905 Serp2Q6TAW2 65 aa9.55□□□□□ -0.88
Ssu72-201ENSMUST00000030905 Ush2AQ2QI47 5193 aa9.55□□□□□ -0.88
Ssu72-201ENSMUST00000030905 4932415D10RikA0A1W2P6U8 4986 aa9.53□□□□□ -0.88
Ssu72-201ENSMUST00000030905 7530416G11RikJ3QJX6 159 aa9.53□□□□□ -0.88
Ssu72-201ENSMUST00000030905 Krtap4-1Q3UUY3 169 aa9.53□□□□□ -0.88
Ssu72-201ENSMUST00000030905 Gm10267M0QWD8 85 aa9.52□□□□□ -0.89
Ssu72-201ENSMUST00000030905 Gm9789Q8BIG3 52 aa9.52□□□□□ -0.89
Ssu72-201ENSMUST00000030905 1700074P13RikQ9D9G7 251 aa9.49□□□□□ -0.89
Ssu72-201ENSMUST00000030905 Gm9821Q8K076 103 aa9.46□□□□□ -0.9
Ssu72-201ENSMUST00000030905 Hmcn2A2AJ76 5100 aa9.45□□□□□ -0.9
Ssu72-201ENSMUST00000030905 B230307C23RikQ8BLB2 64 aa9.43□□□□□ -0.9
Ssu72-201ENSMUST00000030905 Krtap15-1Q9QZU5 150 aa9.43□□□□□ -0.9
Ssu72-201ENSMUST00000030905 Atox1O08997 68 aaKnown RBP9.4□□□□□ -0.9
Ssu72-201ENSMUST00000030905 Rpl37Q9D823 97 aa9.38□□□□□ -0.91
Ssu72-201ENSMUST00000030905 Coa6Q8BGD8 79 aa9.34□□□□□ -0.91
Ssu72-201ENSMUST00000030905 Ubr4A2AN08 5180 aa9.3□□□□□ -0.92
Ssu72-201ENSMUST00000030905 Krtap3-2Q9D638 99 aa9.3□□□□□ -0.92
Ssu72-201ENSMUST00000030905 Krtap3-3Q9D7P0 99 aa9.3□□□□□ -0.92
Ssu72-201ENSMUST00000030905 Spint4Q9D263 159 aa9.27□□□□□ -0.93
Ssu72-201ENSMUST00000030905 Apoc4Q61268 124 aa9.26□□□□□ -0.93
Ssu72-201ENSMUST00000030905 Smlr1J3QMJ4 66 aa9.25□□□□□ -0.93
Ssu72-201ENSMUST00000030905 Sec61bQ9CQS8 96 aaKnown RBP9.24□□□□□ -0.93
Ssu72-201ENSMUST00000030905 2310057N15RikQ9D6T8 200 aa9.2□□□□□ -0.94
Ssu72-201ENSMUST00000030905 Chtf8P0CG14 533 aa9.19□□□□□ -0.94
Ssu72-201ENSMUST00000030905 Gm10160F6Y577 67 aa9.17□□□□□ -0.94
Ssu72-201ENSMUST00000030905 2310034C09RikQ9D746 214 aa9.16□□□□□ -0.94
Ssu72-201ENSMUST00000030905 Gm28539A0A087WSL9 92 aa9.15□□□□□ -0.95
Ssu72-201ENSMUST00000030905 Gm4491E0CX42 125 aa9.15□□□□□ -0.95
Ssu72-201ENSMUST00000030905 Rnase13Q5GAM7 153 aa9.14□□□□□ -0.95
Ssu72-201ENSMUST00000030905 Prr13Q9CQJ5 137 aa9.14□□□□□ -0.95
Ssu72-201ENSMUST00000030905 Gm10999F6Q4M4 69 aa9.13□□□□□ -0.95
Ssu72-201ENSMUST00000030905 Q8BGJ3 129 aa9.13□□□□□ -0.95
Ssu72-201ENSMUST00000030905 Tmem258P61166 79 aa9.12□□□□□ -0.95
Ssu72-201ENSMUST00000030905 Gm10643Q3URG9 111 aa9.12□□□□□ -0.95
Ssu72-201ENSMUST00000030905 Krtap17-1A2A5X6 109 aa9.11□□□□□ -0.95
Ssu72-201ENSMUST00000030905 9230102O04RikA2ASX7 82 aa9.1□□□□□ -0.95
Ssu72-201ENSMUST00000030905 Defb38Q7TNV7 63 aa9.1□□□□□ -0.95
Ssu72-201ENSMUST00000030905 4930507D05RikQ8C9C9 103 aa9.06□□□□□ -0.96
Ssu72-201ENSMUST00000030905 Gm19935A0A1B0GSF9 52 aa9.04□□□□□ -0.96
Ssu72-201ENSMUST00000030905 Pet100P0DJE0 76 aa9.04□□□□□ -0.96
Ssu72-201ENSMUST00000030905 Coa5Q99M07 74 aa9.04□□□□□ -0.96
Ssu72-201ENSMUST00000030905 Gm21798J3QNU5 87 aa9.02□□□□□ -0.97
Ssu72-201ENSMUST00000030905 Krtap1-3A2A588 173 aa9□□□□□ -0.97
Ssu72-201ENSMUST00000030905 ZanO88799 5376 aa8.97□□□□□ -0.97
Ssu72-201ENSMUST00000030905 Crct1Q6PAI5 102 aa8.97□□□□□ -0.97
Ssu72-201ENSMUST00000030905 Gm17416Q30KP4 66 aa8.96□□□□□ -0.97
Ssu72-201ENSMUST00000030905 2310079G19RikQ9D6L6 185 aa8.92□□□□□ -0.98
Ssu72-201ENSMUST00000030905 Gm11563B1AQ90 168 aa8.91□□□□□ -0.98
Ssu72-201ENSMUST00000030905 Krtap16-3Q8C1I6 86 aa8.91□□□□□ -0.98
Ssu72-201ENSMUST00000030905 Krtap4-7Q9D732 168 aa8.91□□□□□ -0.98
Ssu72-201ENSMUST00000030905 SnurfQ9WU12 71 aa8.9□□□□□ -0.98
Ssu72-201ENSMUST00000030905 Krtap19-1Q925H2 87 aa8.89□□□□□ -0.99
Ssu72-201ENSMUST00000030905 Krtap19-3Q925H6 87 aa8.86□□□□□ -0.99
Ssu72-201ENSMUST00000030905 Smim20D3Z7Q2 69 aa8.85□□□□□ -0.99
Ssu72-201ENSMUST00000030905 Cdc42se1Q8BHL7 80 aa8.84□□□□□ -0.99
Ssu72-201ENSMUST00000030905 SptssbQ925E8 76 aa8.84□□□□□ -0.99
Ssu72-201ENSMUST00000030905 Rnf213E9Q555 5152 aaKnown RBP8.82□□□□□ -1
Ssu72-201ENSMUST00000030905 Serp1Q9Z1W5 66 aa8.81□□□□□ -1
Ssu72-201ENSMUST00000030905 Fat4Q2PZL6 4981 aa8.81□□□□□ -1
Ssu72-201ENSMUST00000030905 SmcpP15265 143 aa8.8□□□□□ -1
Ssu72-201ENSMUST00000030905 Fam229aB2KGE5 128 aa8.76□□□□□ -1.01
Ssu72-201ENSMUST00000030905 Rps28P62858 69 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms