RNA–Protein interactions for RNA: ENSMUST00000030905.8

Ssu72-201, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssu72, Length 1,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72-201ENSMUST00000030905 Gm35339A0A140LHH9 1649 aa38.79■■■■□ 3.8
Ssu72-201ENSMUST00000030905 NischQ80TM9 1593 aa38.29■■■■□ 3.72
Ssu72-201ENSMUST00000030905 Abcc9P70170 1546 aa37.2■■■■□ 3.55
Ssu72-201ENSMUST00000030905 Abcc8B2RUS7 1588 aa36.86■■■■□ 3.49
Ssu72-201ENSMUST00000030905 ScribQ80U72 1612 aa35.32■■■■□ 3.24
Ssu72-201ENSMUST00000030905 Kdm5dQ62240 1548 aa34.21■■■■□ 3.07
Ssu72-201ENSMUST00000030905 Dcaf1Q80TR8 1506 aa34.15■■■■□ 3.06
Ssu72-201ENSMUST00000030905 NacadQ5SWP3 1504 aa34.13■■■■□ 3.05
Ssu72-201ENSMUST00000030905 Rb1cc1Q9ESK9 1588 aa33.48■■■□□ 2.95
Ssu72-201ENSMUST00000030905 Sycp2Q9CUU3 1500 aa33.45■■■□□ 2.94
Ssu72-201ENSMUST00000030905 Ccdc180J3QNE4 1664 aa33.33■■■□□ 2.93
Ssu72-201ENSMUST00000030905 Rhox8Q6VSS7 320 aa33.32■■■□□ 2.92
Ssu72-201ENSMUST00000030905 Baz1aO88379 1555 aa33.04■■■□□ 2.88
Ssu72-201ENSMUST00000030905 BicraF8VPZ9 1578 aa32.95■■■□□ 2.87
Ssu72-201ENSMUST00000030905 Crybg2B7ZCC2 1516 aa32.78■■■□□ 2.84
Ssu72-201ENSMUST00000030905 Rtl1Q7M732 1744 aa32.39■■■□□ 2.78
Ssu72-201ENSMUST00000030905 Zcchc6Q5BLK4 1491 aaKnown RBP32.29■■■□□ 2.76
Ssu72-201ENSMUST00000030905 Smarca2Q6DIC0 1577 aa32.18■■■□□ 2.74
Ssu72-201ENSMUST00000030905 Pds5bQ4VA53 1446 aaKnown RBP31.76■■■□□ 2.67
Ssu72-201ENSMUST00000030905 Smarca4Q3TKT4 1613 aaKnown RBP31.69■■■□□ 2.66
Ssu72-201ENSMUST00000030905 Cecr2E9Q2Z1 1453 aa31.67■■■□□ 2.66
Ssu72-201ENSMUST00000030905 Atad2bE9Q166 1460 aaKnown RBP31.61■■■□□ 2.65
Ssu72-201ENSMUST00000030905 Thoc2B1AZI6 1594 aaKnown RBP31.47■■■□□ 2.63
Ssu72-201ENSMUST00000030905 Iqgap2Q3UQ44 1575 aa31.43■■■□□ 2.62
Ssu72-201ENSMUST00000030905 Cttnbp2B9EJA2 1648 aa31.2■■■□□ 2.58
Ssu72-201ENSMUST00000030905 Synj1Q8CHC4 1574 aa31.16■■■□□ 2.58
Ssu72-201ENSMUST00000030905 Ercc6F8VPZ5 1481 aa31.15■■■□□ 2.58
Ssu72-201ENSMUST00000030905 Brd4Q9ESU6 1400 aaKnown RBP31.13■■■□□ 2.57
Ssu72-201ENSMUST00000030905 CftrP26361 1476 aa31.08■■■□□ 2.57
Ssu72-201ENSMUST00000030905 Ccdc136Q3TVA9 1136 aa31.08■■■□□ 2.57
Ssu72-201ENSMUST00000030905 Wdr62Q3U3T8 1523 aa31.07■■■□□ 2.56
Ssu72-201ENSMUST00000030905 Dnajc5bQ9CQ94 199 aa30.95■■■□□ 2.55
Ssu72-201ENSMUST00000030905 Frmpd1A2AKB4 1549 aa30.95■■■□□ 2.55
Ssu72-201ENSMUST00000030905 Cc2d2aQ8CFW7 1633 aa30.91■■■□□ 2.54
Ssu72-201ENSMUST00000030905 Fam135aQ6NS59 1506 aa30.84■■■□□ 2.53
Ssu72-201ENSMUST00000030905 Unc13aQ4KUS2 1712 aa30.83■■■□□ 2.53
Ssu72-201ENSMUST00000030905 Trim41Q5NCC3 630 aa30.68■■■□□ 2.5
Ssu72-201ENSMUST00000030905 Phldb1Q6PDH0 1371 aaKnown RBP30.54■■■□□ 2.48
Ssu72-201ENSMUST00000030905 Baz1bQ9Z277 1479 aa30.48■■■□□ 2.47
Ssu72-201ENSMUST00000030905 Top2bQ64511 1612 aa30.36■■■□□ 2.45
Ssu72-201ENSMUST00000030905 Esf1Q3V1V3 845 aaKnown RBP30.3■■■□□ 2.44
Ssu72-201ENSMUST00000030905 Golga3P55937 1487 aa30.27■■■□□ 2.44
Ssu72-201ENSMUST00000030905 Lamc3Q9R0B6 1581 aa30.13■■■□□ 2.41
Ssu72-201ENSMUST00000030905 Ubl4bQ9CQ84 188 aa30.08■■■□□ 2.41
Ssu72-201ENSMUST00000030905 Rsf1E9PWW9 1441 aaKnown RBP30.06■■■□□ 2.4
Ssu72-201ENSMUST00000030905 TnnQ80Z71 1560 aa30.05■■■□□ 2.4
Ssu72-201ENSMUST00000030905 Mrc2Q64449 1479 aa30.02■■■□□ 2.4
Ssu72-201ENSMUST00000030905 Kif15Q6P9L6 1387 aa29.92■■■□□ 2.38
Ssu72-201ENSMUST00000030905 Cngb1E1AZ71 1325 aa29.92■■■□□ 2.38
Ssu72-201ENSMUST00000030905 Fmn1Q05860 1466 aa29.85■■■□□ 2.37
Ssu72-201ENSMUST00000030905 Cux2P70298 1426 aa29.8■■■□□ 2.36
Ssu72-201ENSMUST00000030905 Camsap1A2AHC3 1581 aa29.67■■■□□ 2.34
Ssu72-201ENSMUST00000030905 Kif21aQ9QXL2 1672 aa29.66■■■□□ 2.34
Ssu72-201ENSMUST00000030905 Ccdc88bQ4QRL3 1481 aa29.6■■■□□ 2.33
Ssu72-201ENSMUST00000030905 Ccdc18Q640L5 1455 aa29.55■■■□□ 2.32
Ssu72-201ENSMUST00000030905 Top2aQ01320 1528 aaKnown RBP29.47■■■□□ 2.31
Ssu72-201ENSMUST00000030905 Cep164Q5DU05 1446 aa29.47■■■□□ 2.31
Ssu72-201ENSMUST00000030905 Lrriq1Q0P5X1 1673 aa29.46■■■□□ 2.31
Ssu72-201ENSMUST00000030905 Npm1Q61937 292 aaKnown RBP29.37■■■□□ 2.29
Ssu72-201ENSMUST00000030905 HrcG5E8J6 738 aa29.34■■■□□ 2.29
Ssu72-201ENSMUST00000030905 Chic1Q8CBW7 227 aa29.29■■■□□ 2.28
Ssu72-201ENSMUST00000030905 Crocc2F6XLV1 1638 aa29.26■■■□□ 2.27
Ssu72-201ENSMUST00000030905 LrpprcQ6PB66 1392 aaKnown RBP29.26■■■□□ 2.27
Ssu72-201ENSMUST00000030905 Grin2bQ01097 1482 aa29.24■■■□□ 2.27
Ssu72-201ENSMUST00000030905 Il27Q8K3I6 234 aa29.23■■■□□ 2.27
Ssu72-201ENSMUST00000030905 Dhx29Q6PGC1 1365 aaKnown RBP29.22■■■□□ 2.27
Ssu72-201ENSMUST00000030905 PogzQ8BZH4 1409 aaKnown RBP29.2■■■□□ 2.26
Ssu72-201ENSMUST00000030905 Urb2E9Q7L1 1524 aaKnown RBP29.09■■■□□ 2.25
Ssu72-201ENSMUST00000030905 Duox2A2AQ99 1517 aa29.07■■■□□ 2.24
Ssu72-201ENSMUST00000030905 NrkQ9R0G8 1455 aa29.07■■■□□ 2.24
Ssu72-201ENSMUST00000030905 Eif4g3Q80XI3 1579 aaKnown RBP29.05■■■□□ 2.24
Ssu72-201ENSMUST00000030905 Plb1Q3TTY0 1478 aa29.02■■■□□ 2.24
Ssu72-201ENSMUST00000030905 Samd9lQ69Z37 1561 aa28.99■■■□□ 2.23
Ssu72-201ENSMUST00000030905 Shroom4Q1W617 1475 aa28.98■■■□□ 2.23
Ssu72-201ENSMUST00000030905 Efcab5A0JP43 1406 aa28.94■■■□□ 2.22
Ssu72-201ENSMUST00000030905 PtprkP35822 1457 aa28.89■■■□□ 2.22
Ssu72-201ENSMUST00000030905 Ift140E9PY46 1464 aa28.86■■■□□ 2.21
Ssu72-201ENSMUST00000030905 Pbrm1Q8BSQ9 1634 aaKnown RBP28.85■■■□□ 2.21
Ssu72-201ENSMUST00000030905 Setd1bQ8CFT2 1985 aa28.85■■■□□ 2.21
Ssu72-201ENSMUST00000030905 Rapgef2Q8CHG7 1496 aa28.74■■■□□ 2.19
Ssu72-201ENSMUST00000030905 Disp1Q3TDN0 1521 aa28.72■■■□□ 2.19
Ssu72-201ENSMUST00000030905 Rusc2Q80U22 1514 aa28.72■■■□□ 2.19
Ssu72-201ENSMUST00000030905 Eif4g1Q6NZJ6 1600 aaKnown RBP28.71■■■□□ 2.19
Ssu72-201ENSMUST00000030905 Gpatch8A2A6A1 1505 aa28.71■■■□□ 2.19
Ssu72-201ENSMUST00000030905 SynmQ70IV5 1561 aa28.7■■■□□ 2.18
Ssu72-201ENSMUST00000030905 Magi3Q9EQJ9 1476 aa28.64■■■□□ 2.18
Ssu72-201ENSMUST00000030905 Nup160Q9Z0W3 1402 aaKnown RBP28.62■■■□□ 2.17
Ssu72-201ENSMUST00000030905 Rad54l2Q99NG0 1466 aa28.62■■■□□ 2.17
Ssu72-201ENSMUST00000030905 Mroh2bQ7M6Y6 1581 aa28.59■■■□□ 2.17
Ssu72-201ENSMUST00000030905 Gab3Q8BSM5 595 aa28.59■■■□□ 2.17
Ssu72-201ENSMUST00000030905 Grin2aP35436 1464 aa28.58■■■□□ 2.17
Ssu72-201ENSMUST00000030905 Map3k1P53349 1493 aa28.54■■■□□ 2.16
Ssu72-201ENSMUST00000030905 Arhgap35Q91YM2 1499 aa28.53■■■□□ 2.16
Ssu72-201ENSMUST00000030905 Pla2r1Q62028 1487 aa28.52■■■□□ 2.16
Ssu72-201ENSMUST00000030905 Dnajc5P60904 198 aa28.51■■■□□ 2.15
Ssu72-201ENSMUST00000030905 Npm2Q80W85 207 aa28.49■■■□□ 2.15
Ssu72-201ENSMUST00000030905 Cc2d2bA0A286YDU8 1405 aa28.48■■■□□ 2.15
Ssu72-201ENSMUST00000030905 Cep162Q6ZQ06 1403 aa28.48■■■□□ 2.15
Ssu72-201ENSMUST00000030905 AqrQ8CFQ3 1481 aaKnown RBP28.45■■■□□ 2.14
Ssu72-201ENSMUST00000030905 Zeb1Q64318 1117 aa28.34■■■□□ 2.13
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms