RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 RetnlbQ99P86 105 aa9.95□□□□□ -0.82
Rpf1-201ENSMUST00000029838 Apoc4Q61268 124 aa9.94□□□□□ -0.82
Rpf1-201ENSMUST00000029838 Spaca4Q80ZQ0 127 aa9.94□□□□□ -0.82
Rpf1-201ENSMUST00000029838 Defa21Q8C1P2 93 aa9.94□□□□□ -0.82
Rpf1-201ENSMUST00000029838 Ryr3A2AGL3 4863 aa9.94□□□□□ -0.82
Rpf1-201ENSMUST00000029838 Fat1A0A1L1SQU7 4645 aa9.92□□□□□ -0.82
Rpf1-201ENSMUST00000029838 Hectd4E9Q2E4 4418 aa9.91□□□□□ -0.82
Rpf1-201ENSMUST00000029838 Igkv3-3A0A140T8Q0 119 aa9.91□□□□□ -0.82
Rpf1-201ENSMUST00000029838 Lce1mQ9CR91 182 aa9.91□□□□□ -0.82
Rpf1-201ENSMUST00000029838 Gm2310J3QNJ2 377 aa9.9□□□□□ -0.82
Rpf1-201ENSMUST00000029838 B230307C23RikQ8BLB2 64 aa9.9□□□□□ -0.83
Rpf1-201ENSMUST00000029838 SmcpP15265 143 aa9.89□□□□□ -0.83
Rpf1-201ENSMUST00000029838 Pkhd1E9PZ36 4059 aa9.88□□□□□ -0.83
Rpf1-201ENSMUST00000029838 Ryr2E9Q401 4966 aaKnown RBP9.87□□□□□ -0.83
Rpf1-201ENSMUST00000029838 Lrp1bQ9JI18 4599 aa9.84□□□□□ -0.83
Rpf1-201ENSMUST00000029838 BikO70337 150 aa9.84□□□□□ -0.83
Rpf1-201ENSMUST00000029838 Stard9Q80TF6 4561 aa9.84□□□□□ -0.83
Rpf1-201ENSMUST00000029838 Cypt15B1AXS0 87 aa9.82□□□□□ -0.84
Rpf1-201ENSMUST00000029838 A0A1Y7VLE6 161 aa9.8□□□□□ -0.84
Rpf1-201ENSMUST00000029838 Rps29P62274 56 aa9.78□□□□□ -0.84
Rpf1-201ENSMUST00000029838 Krtap28-10A0A1Y7VP58 119 aa9.77□□□□□ -0.84
Rpf1-201ENSMUST00000029838 Scgb1b2O35176 93 aa9.77□□□□□ -0.85
Rpf1-201ENSMUST00000029838 1700074P13RikQ9D9G7 251 aa9.76□□□□□ -0.85
Rpf1-201ENSMUST00000029838 Gm11939A2A592 99 aa9.75□□□□□ -0.85
Rpf1-201ENSMUST00000029838 Smim20D3Z7Q2 69 aa9.75□□□□□ -0.85
Rpf1-201ENSMUST00000029838 Smlr1J3QMJ4 66 aa9.74□□□□□ -0.85
Rpf1-201ENSMUST00000029838 Defb13Q8R2I4 64 aa9.74□□□□□ -0.85
Rpf1-201ENSMUST00000029838 Krtap28-13A0A087WQP5 138 aa9.74□□□□□ -0.85
Rpf1-201ENSMUST00000029838 Atox1O08997 68 aaKnown RBP9.74□□□□□ -0.85
Rpf1-201ENSMUST00000029838 Tmem258P61166 79 aa9.71□□□□□ -0.86
Rpf1-201ENSMUST00000029838 Coa6Q8BGD8 79 aa9.7□□□□□ -0.86
Rpf1-201ENSMUST00000029838 Gm19935A0A1B0GSF9 52 aa9.67□□□□□ -0.86
Rpf1-201ENSMUST00000029838 Krtap19-5O08632 62 aa9.67□□□□□ -0.86
Rpf1-201ENSMUST00000029838 Fat2Q5F226 4351 aa9.66□□□□□ -0.86
Rpf1-201ENSMUST00000029838 Pkhd1l1Q80ZA4 4249 aa9.65□□□□□ -0.86
Rpf1-201ENSMUST00000029838 SacsQ9JLC8 4582 aa9.65□□□□□ -0.86
Rpf1-201ENSMUST00000029838 Rps28P62858 69 aaKnown RBP9.64□□□□□ -0.87
Rpf1-201ENSMUST00000029838 Gm10267M0QWD8 85 aa9.64□□□□□ -0.87
Rpf1-201ENSMUST00000029838 Spint4Q9D263 159 aa9.64□□□□□ -0.87
Rpf1-201ENSMUST00000029838 SvipQ3UZP4 77 aa9.61□□□□□ -0.87
Rpf1-201ENSMUST00000029838 Ryr1E9PZQ0 5035 aa9.6□□□□□ -0.87
Rpf1-201ENSMUST00000029838 A030005K14RikA0A1Y7VNY1 122 aa9.59□□□□□ -0.87
Rpf1-201ENSMUST00000029838 Krtap3-2Q9D638 99 aa9.59□□□□□ -0.87
Rpf1-201ENSMUST00000029838 Krtap3-3Q9D7P0 99 aa9.59□□□□□ -0.87
Rpf1-201ENSMUST00000029838 Gm26620Q9CY65 116 aa9.58□□□□□ -0.88
Rpf1-201ENSMUST00000029838 Pet100P0DJE0 76 aa9.57□□□□□ -0.88
Rpf1-201ENSMUST00000029838 Vps13bQ80TY5 3993 aa9.57□□□□□ -0.88
Rpf1-201ENSMUST00000029838 D6Ertd527eA0A0N4SWI3 464 aa9.54□□□□□ -0.88
Rpf1-201ENSMUST00000029838 Kmt2cQ8BRH4 4903 aa9.52□□□□□ -0.89
Rpf1-201ENSMUST00000029838 Chtf8P0CG14 533 aa9.49□□□□□ -0.89
Rpf1-201ENSMUST00000029838 Dnah8Q91XQ0 4731 aa9.49□□□□□ -0.89
Rpf1-201ENSMUST00000029838 A530084C06RikQ3UTW2 186 aa9.48□□□□□ -0.89
Rpf1-201ENSMUST00000029838 Gm10160F6Y577 67 aa9.47□□□□□ -0.89
Rpf1-201ENSMUST00000029838 SnurfQ9WU12 71 aa9.45□□□□□ -0.9
Rpf1-201ENSMUST00000029838 Coa5Q99M07 74 aa9.45□□□□□ -0.9
Rpf1-201ENSMUST00000029838 Serp1Q9Z1W5 66 aa9.41□□□□□ -0.9
Rpf1-201ENSMUST00000029838 Defb38Q7TNV7 63 aa9.36□□□□□ -0.91
Rpf1-201ENSMUST00000029838 Gm5767A0A0J9YTU8 78 aa9.36□□□□□ -0.91
Rpf1-201ENSMUST00000029838 Gm10643Q3URG9 111 aa9.36□□□□□ -0.91
Rpf1-201ENSMUST00000029838 Fat3Q8BNA6 4555 aa9.35□□□□□ -0.91
Rpf1-201ENSMUST00000029838 Lrp1Q91ZX7 4545 aaKnown RBP9.34□□□□□ -0.91
Rpf1-201ENSMUST00000029838 Brk1Q91VR8 75 aa9.33□□□□□ -0.92
Rpf1-201ENSMUST00000029838 Cdc42se1Q8BHL7 80 aa9.32□□□□□ -0.92
Rpf1-201ENSMUST00000029838 H2al1aQ5M8Q2 105 aa9.32□□□□□ -0.92
Rpf1-201ENSMUST00000029838 Gm9736A0A1W2P7N1 277 aa9.29□□□□□ -0.92
Rpf1-201ENSMUST00000029838 Gm10999F6Q4M4 69 aa9.28□□□□□ -0.92
Rpf1-201ENSMUST00000029838 Gm21798J3QNU5 87 aa9.26□□□□□ -0.93
Rpf1-201ENSMUST00000029838 Q8BGJ3 129 aa9.26□□□□□ -0.93
Rpf1-201ENSMUST00000029838 Dnhd1D3Z2X2 4750 aa9.23□□□□□ -0.93
Rpf1-201ENSMUST00000029838 Gm4491E0CX42 125 aa9.2□□□□□ -0.94
Rpf1-201ENSMUST00000029838 Gm5965D3Z724 196 aa9.19□□□□□ -0.94
Rpf1-201ENSMUST00000029838 Gm10197F6QEY5 67 aa9.19□□□□□ -0.94
Rpf1-201ENSMUST00000029838 A930033H14RikG5E8X6 103 aa9.19□□□□□ -0.94
Rpf1-201ENSMUST00000029838 2310034C09RikQ9D746 214 aa9.18□□□□□ -0.94
Rpf1-201ENSMUST00000029838 4930507D05RikQ8C9C9 103 aa9.17□□□□□ -0.94
Rpf1-201ENSMUST00000029838 Abca13Q5SSE9 5034 aa9.17□□□□□ -0.94
Rpf1-201ENSMUST00000029838 Gm19402J3QJV4 266 aa9.16□□□□□ -0.94
Rpf1-201ENSMUST00000029838 Birc6O88738 4882 aa9.13□□□□□ -0.95
Rpf1-201ENSMUST00000029838 Herc2Q4U2R1 4836 aa9.13□□□□□ -0.95
Rpf1-201ENSMUST00000029838 Gm9821Q8K076 103 aa9.1□□□□□ -0.95
Rpf1-201ENSMUST00000029838 9230102O04RikA2ASX7 82 aa9.1□□□□□ -0.95
Rpf1-201ENSMUST00000029838 Rpl37Q9D823 97 aa9.1□□□□□ -0.95
Rpf1-201ENSMUST00000029838 Krtap15-1Q9QZU5 150 aa9.09□□□□□ -0.95
Rpf1-201ENSMUST00000029838 Kiaa1109A2AAE1 5005 aa9.08□□□□□ -0.96
Rpf1-201ENSMUST00000029838 A030005L19RikA0A1Y7VIU2 113 aa9.08□□□□□ -0.96
Rpf1-201ENSMUST00000029838 Phxr4P15974 95 aa9.08□□□□□ -0.96
Rpf1-201ENSMUST00000029838 2310079G19RikQ9D6L6 185 aa9.07□□□□□ -0.96
Rpf1-201ENSMUST00000029838 Gm20661K7N787 53 aa9.05□□□□□ -0.96
Rpf1-201ENSMUST00000029838 Rnase13Q5GAM7 153 aa9.05□□□□□ -0.96
Rpf1-201ENSMUST00000029838 H2al1eQ810S6 105 aa9.05□□□□□ -0.96
Rpf1-201ENSMUST00000029838 SptssbQ925E8 76 aa9.03□□□□□ -0.96
Rpf1-201ENSMUST00000029838 Gm10337F7DEP7 55 aa9.01□□□□□ -0.97
Rpf1-201ENSMUST00000029838 Mycbp2Q7TPH6 4711 aa9□□□□□ -0.97
Rpf1-201ENSMUST00000029838 H2al1bA0A087WP11 105 aa8.96□□□□□ -0.98
Rpf1-201ENSMUST00000029838 H2al1kJ3QP08 105 aa8.96□□□□□ -0.98
Rpf1-201ENSMUST00000029838 H2al1mQ9DAD9 105 aa8.96□□□□□ -0.98
Rpf1-201ENSMUST00000029838 Ndufb1P0DN34 57 aa8.91□□□□□ -0.98
Rpf1-201ENSMUST00000029838 Gm7544A0A1Y7VJ58 118 aa8.91□□□□□ -0.98
Rpf1-201ENSMUST00000029838 Uqcr11Q9CPX8 56 aa8.9□□□□□ -0.98
Rpf1-201ENSMUST00000029838 Limd2Q8BGB5 128 aa8.89□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms