RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 NischQ80TM9 1593 aa35.04■■■■□ 3.2
Rpf1-201ENSMUST00000029838 Gm35339A0A140LHH9 1649 aa34.93■■■■□ 3.18
Rpf1-201ENSMUST00000029838 Abcc9P70170 1546 aa33.98■■■■□ 3.03
Rpf1-201ENSMUST00000029838 Abcc8B2RUS7 1588 aa33.5■■■□□ 2.95
Rpf1-201ENSMUST00000029838 Rhox8Q6VSS7 320 aa31.56■■■□□ 2.64
Rpf1-201ENSMUST00000029838 ScribQ80U72 1612 aa31.53■■■□□ 2.64
Rpf1-201ENSMUST00000029838 Dcaf1Q80TR8 1506 aa31.27■■■□□ 2.6
Rpf1-201ENSMUST00000029838 NacadQ5SWP3 1504 aa30.85■■■□□ 2.53
Rpf1-201ENSMUST00000029838 Kdm5dQ62240 1548 aa30.84■■■□□ 2.53
Rpf1-201ENSMUST00000029838 Rb1cc1Q9ESK9 1588 aa30.64■■■□□ 2.5
Rpf1-201ENSMUST00000029838 Rtl1Q7M732 1744 aa30.62■■■□□ 2.49
Rpf1-201ENSMUST00000029838 Ccdc180J3QNE4 1664 aa30.5■■■□□ 2.47
Rpf1-201ENSMUST00000029838 Baz1aO88379 1555 aa30.3■■■□□ 2.44
Rpf1-201ENSMUST00000029838 Sycp2Q9CUU3 1500 aa30.14■■■□□ 2.42
Rpf1-201ENSMUST00000029838 Crybg2B7ZCC2 1516 aa30.07■■■□□ 2.4
Rpf1-201ENSMUST00000029838 Zcchc6Q5BLK4 1491 aaKnown RBP29.68■■■□□ 2.34
Rpf1-201ENSMUST00000029838 Smarca2Q6DIC0 1577 aa29.5■■■□□ 2.31
Rpf1-201ENSMUST00000029838 BicraF8VPZ9 1578 aa29.45■■■□□ 2.31
Rpf1-201ENSMUST00000029838 Ccdc136Q3TVA9 1136 aa29.29■■■□□ 2.28
Rpf1-201ENSMUST00000029838 Trim41Q5NCC3 630 aa29.03■■■□□ 2.24
Rpf1-201ENSMUST00000029838 Cecr2E9Q2Z1 1453 aa28.88■■■□□ 2.21
Rpf1-201ENSMUST00000029838 Brd4Q9ESU6 1400 aaKnown RBP28.86■■■□□ 2.21
Rpf1-201ENSMUST00000029838 Smarca4Q3TKT4 1613 aaKnown RBP28.69■■■□□ 2.18
Rpf1-201ENSMUST00000029838 Pds5bQ4VA53 1446 aaKnown RBP28.56■■■□□ 2.16
Rpf1-201ENSMUST00000029838 Synj1Q8CHC4 1574 aa28.54■■■□□ 2.16
Rpf1-201ENSMUST00000029838 HrcG5E8J6 738 aa28.54■■■□□ 2.16
Rpf1-201ENSMUST00000029838 CftrP26361 1476 aa28.5■■■□□ 2.15
Rpf1-201ENSMUST00000029838 Atad2bE9Q166 1460 aaKnown RBP28.49■■■□□ 2.15
Rpf1-201ENSMUST00000029838 Cttnbp2B9EJA2 1648 aa28.47■■■□□ 2.15
Rpf1-201ENSMUST00000029838 Iqgap2Q3UQ44 1575 aa28.36■■■□□ 2.13
Rpf1-201ENSMUST00000029838 Esf1Q3V1V3 845 aaKnown RBP28.26■■■□□ 2.12
Rpf1-201ENSMUST00000029838 Golga3P55937 1487 aa28.21■■■□□ 2.11
Rpf1-201ENSMUST00000029838 Cngb1E1AZ71 1325 aa28.16■■■□□ 2.1
Rpf1-201ENSMUST00000029838 Ercc6F8VPZ5 1481 aa28■■■□□ 2.07
Rpf1-201ENSMUST00000029838 Top2bQ64511 1612 aa27.97■■■□□ 2.07
Rpf1-201ENSMUST00000029838 Wdr62Q3U3T8 1523 aa27.91■■■□□ 2.06
Rpf1-201ENSMUST00000029838 Cep164Q5DU05 1446 aa27.88■■■□□ 2.05
Rpf1-201ENSMUST00000029838 Frmpd1A2AKB4 1549 aa27.87■■■□□ 2.05
Rpf1-201ENSMUST00000029838 Thoc2B1AZI6 1594 aaKnown RBP27.75■■■□□ 2.03
Rpf1-201ENSMUST00000029838 Rsf1E9PWW9 1441 aaKnown RBP27.73■■■□□ 2.03
Rpf1-201ENSMUST00000029838 Fmn1Q05860 1466 aa27.67■■■□□ 2.02
Rpf1-201ENSMUST00000029838 Ccdc88bQ4QRL3 1481 aa27.66■■■□□ 2.02
Rpf1-201ENSMUST00000029838 Chic1Q8CBW7 227 aa27.65■■■□□ 2.02
Rpf1-201ENSMUST00000029838 Cc2d2aQ8CFW7 1633 aa27.63■■■□□ 2.01
Rpf1-201ENSMUST00000029838 Phldb1Q6PDH0 1371 aaKnown RBP27.55■■■□□ 2
Rpf1-201ENSMUST00000029838 Unc13aQ4KUS2 1712 aa27.49■■□□□ 1.99
Rpf1-201ENSMUST00000029838 TnnQ80Z71 1560 aa27.42■■□□□ 1.98
Rpf1-201ENSMUST00000029838 Lamc3Q9R0B6 1581 aa27.42■■□□□ 1.98
Rpf1-201ENSMUST00000029838 Fam135aQ6NS59 1506 aa27.4■■□□□ 1.98
Rpf1-201ENSMUST00000029838 Kif15Q6P9L6 1387 aa27.34■■□□□ 1.97
Rpf1-201ENSMUST00000029838 Top2aQ01320 1528 aaKnown RBP27.32■■□□□ 1.96
Rpf1-201ENSMUST00000029838 Gab3Q8BSM5 595 aa27.28■■□□□ 1.96
Rpf1-201ENSMUST00000029838 Ubl4bQ9CQ84 188 aa27.28■■□□□ 1.96
Rpf1-201ENSMUST00000029838 Baz1bQ9Z277 1479 aa27.23■■□□□ 1.95
Rpf1-201ENSMUST00000029838 Ccdc18Q640L5 1455 aa27.12■■□□□ 1.93
Rpf1-201ENSMUST00000029838 Cux2P70298 1426 aa27.05■■□□□ 1.92
Rpf1-201ENSMUST00000029838 Camsap1A2AHC3 1581 aa27.04■■□□□ 1.92
Rpf1-201ENSMUST00000029838 Rapgef2Q8CHG7 1496 aa27.01■■□□□ 1.91
Rpf1-201ENSMUST00000029838 Il27Q8K3I6 234 aa26.98■■□□□ 1.91
Rpf1-201ENSMUST00000029838 Npm1Q61937 292 aaKnown RBP26.97■■□□□ 1.91
Rpf1-201ENSMUST00000029838 Dnajc5bQ9CQ94 199 aa26.91■■□□□ 1.9
Rpf1-201ENSMUST00000029838 Npm2Q80W85 207 aa26.89■■□□□ 1.9
Rpf1-201ENSMUST00000029838 NrkQ9R0G8 1455 aa26.85■■□□□ 1.89
Rpf1-201ENSMUST00000029838 Mrc2Q64449 1479 aa26.81■■□□□ 1.88
Rpf1-201ENSMUST00000029838 Grin2bQ01097 1482 aa26.81■■□□□ 1.88
Rpf1-201ENSMUST00000029838 Cep162Q6ZQ06 1403 aa26.8■■□□□ 1.88
Rpf1-201ENSMUST00000029838 Shroom4Q1W617 1475 aa26.76■■□□□ 1.87
Rpf1-201ENSMUST00000029838 LrpprcQ6PB66 1392 aaKnown RBP26.74■■□□□ 1.87
Rpf1-201ENSMUST00000029838 PtprkP35822 1457 aa26.65■■□□□ 1.86
Rpf1-201ENSMUST00000029838 PogzQ8BZH4 1409 aaKnown RBP26.64■■□□□ 1.85
Rpf1-201ENSMUST00000029838 Eif4g1Q6NZJ6 1600 aaKnown RBP26.63■■□□□ 1.85
Rpf1-201ENSMUST00000029838 Efcab5A0JP43 1406 aa26.63■■□□□ 1.85
Rpf1-201ENSMUST00000029838 Myt1lP97500 1187 aa26.6■■□□□ 1.85
Rpf1-201ENSMUST00000029838 Ehmt2Q9Z148 1263 aaKnown RBP26.57■■□□□ 1.84
Rpf1-201ENSMUST00000029838 Dhx29Q6PGC1 1365 aaKnown RBP26.55■■□□□ 1.84
Rpf1-201ENSMUST00000029838 Duox2A2AQ99 1517 aa26.55■■□□□ 1.84
Rpf1-201ENSMUST00000029838 Arhgap35Q91YM2 1499 aa26.54■■□□□ 1.84
Rpf1-201ENSMUST00000029838 Map3k1P53349 1493 aa26.53■■□□□ 1.84
Rpf1-201ENSMUST00000029838 Kif21aQ9QXL2 1672 aa26.51■■□□□ 1.83
Rpf1-201ENSMUST00000029838 Zeb1Q64318 1117 aa26.5■■□□□ 1.83
Rpf1-201ENSMUST00000029838 Mroh2bQ7M6Y6 1581 aa26.46■■□□□ 1.83
Rpf1-201ENSMUST00000029838 Crocc2F6XLV1 1638 aa26.45■■□□□ 1.82
Rpf1-201ENSMUST00000029838 Rpgrip1Q9EPQ2 1331 aa26.41■■□□□ 1.82
Rpf1-201ENSMUST00000029838 Clip1Q922J3 1391 aa26.38■■□□□ 1.81
Rpf1-201ENSMUST00000029838 AqrQ8CFQ3 1481 aaKnown RBP26.35■■□□□ 1.81
Rpf1-201ENSMUST00000029838 Acin1Q9JIX8 1338 aaKnown RBP26.31■■□□□ 1.8
Rpf1-201ENSMUST00000029838 Samd9lQ69Z37 1561 aa26.28■■□□□ 1.8
Rpf1-201ENSMUST00000029838 SynmQ70IV5 1561 aa26.26■■□□□ 1.79
Rpf1-201ENSMUST00000029838 Carmil1Q6EDY6 1374 aa26.26■■□□□ 1.79
Rpf1-201ENSMUST00000029838 Eea1Q8BL66 1411 aa26.23■■□□□ 1.79
Rpf1-201ENSMUST00000029838 Plb1Q3TTY0 1478 aa26.21■■□□□ 1.79
Rpf1-201ENSMUST00000029838 Urb2E9Q7L1 1524 aaKnown RBP26.16■■□□□ 1.78
Rpf1-201ENSMUST00000029838 Setd5Q5XJV7 1441 aa26.14■■□□□ 1.78
Rpf1-201ENSMUST00000029838 Rad54l2Q99NG0 1466 aa26.13■■□□□ 1.77
Rpf1-201ENSMUST00000029838 Polr1aO35134 1717 aaKnown RBP26.12■■□□□ 1.77
Rpf1-201ENSMUST00000029838 Ift140E9PY46 1464 aa26.12■■□□□ 1.77
Rpf1-201ENSMUST00000029838 Lrriq1Q0P5X1 1673 aa26.1■■□□□ 1.77
Rpf1-201ENSMUST00000029838 Rpap1Q80TE0 1409 aa26.07■■□□□ 1.76
Rpf1-201ENSMUST00000029838 Disp1Q3TDN0 1521 aa26.04■■□□□ 1.76
Rpf1-201ENSMUST00000029838 Erich3F6QRE9 1637 aa26.03■■□□□ 1.76
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms