RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 RetnlbQ99P86 105 aa7.68□□□□□ -1.18
Trim50-202ENSMUST00000111180 Igkv2-109A0A075B5K6 120 aa7.68□□□□□ -1.18
Trim50-202ENSMUST00000111180 Tmem243B2RVB9 118 aa7.68□□□□□ -1.18
Trim50-202ENSMUST00000111180 A930002H24RikQ8C8Y3 163 aa7.68□□□□□ -1.18
Trim50-202ENSMUST00000111180 A330070K13RikQ8CA53 115 aa7.68□□□□□ -1.18
Trim50-202ENSMUST00000111180 Pkhd1l1Q80ZA4 4249 aa7.67□□□□□ -1.18
Trim50-202ENSMUST00000111180 Defa7P50705 93 aa7.67□□□□□ -1.18
Trim50-202ENSMUST00000111180 Gm27235Q3UW50 83 aa7.67□□□□□ -1.18
Trim50-202ENSMUST00000111180 Ube2aQ9Z255 152 aa7.67□□□□□ -1.18
Trim50-202ENSMUST00000111180 Vpreb2P13373 142 aa7.66□□□□□ -1.18
Trim50-202ENSMUST00000111180 Pxt1Q8K459 51 aa7.66□□□□□ -1.18
Trim50-202ENSMUST00000111180 Krtap19-5O08632 62 aa7.65□□□□□ -1.18
Trim50-202ENSMUST00000111180 Gm10767Q3TQP0 103 aa7.65□□□□□ -1.18
Trim50-202ENSMUST00000111180 Igkv8-26A0A075B5N5 123 aa7.64□□□□□ -1.19
Trim50-202ENSMUST00000111180 5730596B20RikQ8BQ08 205 aa7.64□□□□□ -1.19
Trim50-202ENSMUST00000111180 9530003J23RikQ8BM26 151 aa7.63□□□□□ -1.19
Trim50-202ENSMUST00000111180 Gm10139O88245 57 aa7.62□□□□□ -1.19
Trim50-202ENSMUST00000111180 Igkv3-7A0A0G2JE31 119 aa7.62□□□□□ -1.19
Trim50-202ENSMUST00000111180 Ccdc179J3QM76 67 aa7.62□□□□□ -1.19
Trim50-202ENSMUST00000111180 Gm7102J3QQ10 178 aa7.62□□□□□ -1.19
Trim50-202ENSMUST00000111180 Lamtor3O88653 124 aa7.62□□□□□ -1.19
Trim50-202ENSMUST00000111180 Gm10642Q3TWM1 71 aa7.62□□□□□ -1.19
Trim50-202ENSMUST00000111180 Defb37Q7TMD2 62 aa7.62□□□□□ -1.19
Trim50-202ENSMUST00000111180 Defa28D3Z1V9 94 aa7.61□□□□□ -1.19
Trim50-202ENSMUST00000111180 Igf1P05017 153 aa7.61□□□□□ -1.19
Trim50-202ENSMUST00000111180 D130052B06RikQ3UW13 202 aa7.61□□□□□ -1.19
Trim50-202ENSMUST00000111180 Ighv10-3A0A075B5T6 119 aa7.6□□□□□ -1.19
Trim50-202ENSMUST00000111180 Ifitm6A0A1B0GS75 124 aa7.6□□□□□ -1.19
Trim50-202ENSMUST00000111180 A0A286YE02 88 aa7.6□□□□□ -1.19
Trim50-202ENSMUST00000111180 Vpreb3D3Z6J4 130 aa7.6□□□□□ -1.19
Trim50-202ENSMUST00000111180 Sfta2E9PXB6 77 aa7.6□□□□□ -1.19
Trim50-202ENSMUST00000111180 Rpl37aP61514 92 aa7.6□□□□□ -1.19
Trim50-202ENSMUST00000111180 A830005F24RikQ8BRT5 167 aa7.6□□□□□ -1.19
Trim50-202ENSMUST00000111180 Gm37389A0A0A6YW05 95 aa7.59□□□□□ -1.19
Trim50-202ENSMUST00000111180 Gm10570F6VB42 170 aa7.59□□□□□ -1.19
Trim50-202ENSMUST00000111180 Krtap14O08640 167 aa7.59□□□□□ -1.19
Trim50-202ENSMUST00000111180 Vps25Q9CQ80 176 aa7.59□□□□□ -1.19
Trim50-202ENSMUST00000111180 Lrp1Q91ZX7 4545 aaKnown RBP7.58□□□□□ -1.2
Trim50-202ENSMUST00000111180 Igkv1-110A0A0B4J1I0 119 aa7.58□□□□□ -1.2
Trim50-202ENSMUST00000111180 Gtf2h5Q8K2X8 71 aa7.58□□□□□ -1.2
Trim50-202ENSMUST00000111180 Lrp1bQ9JI18 4599 aa7.57□□□□□ -1.2
Trim50-202ENSMUST00000111180 Igkv3-5A0A140T8M6 119 aa7.57□□□□□ -1.2
Trim50-202ENSMUST00000111180 Xcl1P47993 114 aa7.57□□□□□ -1.2
Trim50-202ENSMUST00000111180 Znf706Q9D115 76 aaKnown RBP7.57□□□□□ -1.2
Trim50-202ENSMUST00000111180 Gm10401E9Q3K6 71 aa7.56□□□□□ -1.2
Trim50-202ENSMUST00000111180 Vpreb1P13372 142 aa7.56□□□□□ -1.2
Trim50-202ENSMUST00000111180 Defb39Q70KL3 74 aa7.55□□□□□ -1.2
Trim50-202ENSMUST00000111180 Gm20726G3UX18 150 aa7.55□□□□□ -1.2
Trim50-202ENSMUST00000111180 Igkv8-27A0A0G2JF28 120 aa7.54□□□□□ -1.2
Trim50-202ENSMUST00000111180 Igkv8-30A0A140T8M3 121 aa7.54□□□□□ -1.2
Trim50-202ENSMUST00000111180 Gm12353A2AGJ4 60 aa7.53□□□□□ -1.2
Trim50-202ENSMUST00000111180 Pde6gP09174 87 aa7.53□□□□□ -1.2
Trim50-202ENSMUST00000111180 P06320 134 aa7.52□□□□□ -1.21
Trim50-202ENSMUST00000111180 Wfdc13Q5DQQ6 81 aa7.52□□□□□ -1.21
Trim50-202ENSMUST00000111180 Fat2Q5F226 4351 aa7.52□□□□□ -1.21
Trim50-202ENSMUST00000111180 Rbm3O89086 153 aaKnown RBP7.51□□□□□ -1.21
Trim50-202ENSMUST00000111180 Cox6a2P43023 97 aa7.51□□□□□ -1.21
Trim50-202ENSMUST00000111180 Odf3bQ5M8M2 238 aa7.51□□□□□ -1.21
Trim50-202ENSMUST00000111180 Lyrm7Q9DA03 104 aa7.51□□□□□ -1.21
Trim50-202ENSMUST00000111180 Fam240bJ3QMB3 78 aa7.49□□□□□ -1.21
Trim50-202ENSMUST00000111180 Chchd10Q7TNL9 138 aa7.49□□□□□ -1.21
Trim50-202ENSMUST00000111180 Hectd4E9Q2E4 4418 aa7.49□□□□□ -1.21
Trim50-202ENSMUST00000111180 Gm45213A0A0U1RNZ6 101 aa7.49□□□□□ -1.21
Trim50-202ENSMUST00000111180 Cby1Q9D1C2 127 aa7.49□□□□□ -1.21
Trim50-202ENSMUST00000111180 Bean1Q9EQG5 255 aa7.48□□□□□ -1.21
Trim50-202ENSMUST00000111180 Sprr2jO70561 109 aa7.47□□□□□ -1.21
Trim50-202ENSMUST00000111180 Lrp2A2ARV4 4660 aa7.46□□□□□ -1.21
Trim50-202ENSMUST00000111180 Trav14d-3-dv8A0A075B619 120 aa7.46□□□□□ -1.22
Trim50-202ENSMUST00000111180 Igkv8-28A0A0G2JE47 121 aa7.46□□□□□ -1.22
Trim50-202ENSMUST00000111180 Ormdl1Q921I0 153 aa7.46□□□□□ -1.22
Trim50-202ENSMUST00000111180 Cypt14J3QPF7 87 aa7.43□□□□□ -1.22
Trim50-202ENSMUST00000111180 A730071L15RikQ8C4X0 137 aa7.43□□□□□ -1.22
Trim50-202ENSMUST00000111180 Mrpl55Q9CZ83 127 aa7.43□□□□□ -1.22
Trim50-202ENSMUST00000111180 Trav3-1Q5R1I8 114 aa7.42□□□□□ -1.22
Trim50-202ENSMUST00000111180 Q8BT88 171 aa7.42□□□□□ -1.22
Trim50-202ENSMUST00000111180 Gm10308Q9CVR5 141 aa7.42□□□□□ -1.22
Trim50-202ENSMUST00000111180 1700018G05RikA0A1B0GSI2 66 aa7.41□□□□□ -1.22
Trim50-202ENSMUST00000111180 Gm28230A0A0A0MQ91 144 aa7.39□□□□□ -1.23
Trim50-202ENSMUST00000111180 Cdip1Q9DB75 208 aa7.39□□□□□ -1.23
Trim50-202ENSMUST00000111180 Ubl5Q9EPV8 73 aa7.37□□□□□ -1.23
Trim50-202ENSMUST00000111180 Igkv3-4A0A140T8Q4 119 aa7.36□□□□□ -1.23
Trim50-202ENSMUST00000111180 Anapc11Q9CPX9 84 aa7.36□□□□□ -1.23
Trim50-202ENSMUST00000111180 D6Ertd527eA0A0N4SWI3 464 aa7.35□□□□□ -1.23
Trim50-202ENSMUST00000111180 A530084C06RikQ3UTW2 186 aa7.35□□□□□ -1.23
Trim50-202ENSMUST00000111180 Igkv3-10A0A0G2JGN0 119 aa7.34□□□□□ -1.23
Trim50-202ENSMUST00000111180 Igkv8-21A0A140T8P7 120 aa7.34□□□□□ -1.23
Trim50-202ENSMUST00000111180 Gm20604F8WIA3 75 aa7.34□□□□□ -1.23
Trim50-202ENSMUST00000111180 Prm1P02319 51 aa7.34□□□□□ -1.23
Trim50-202ENSMUST00000111180 Gm37013Q8K491 104 aa7.33□□□□□ -1.24
Trim50-202ENSMUST00000111180 Tmem213Q08EA8 116 aa7.32□□□□□ -1.24
Trim50-202ENSMUST00000111180 Mrpl34Q99N91 92 aa7.31□□□□□ -1.24
Trim50-202ENSMUST00000111180 Gm44790A0A0N4SV91 103 aa7.3□□□□□ -1.24
Trim50-202ENSMUST00000111180 Gm7735D3YX18 52 aa7.3□□□□□ -1.24
Trim50-202ENSMUST00000111180 UqcrqQ9CQ69 82 aa7.3□□□□□ -1.24
Trim50-202ENSMUST00000111180 Defa25Q5G864 92 aa7.3□□□□□ -1.24
Trim50-202ENSMUST00000111180 MplkipQ9D011 178 aa7.3□□□□□ -1.24
Trim50-202ENSMUST00000111180 BatfO35284 125 aa7.29□□□□□ -1.24
Trim50-202ENSMUST00000111180 Tmem254aP0DN89 123 aa7.29□□□□□ -1.24
Trim50-202ENSMUST00000111180 Tmem254bP0DN90 123 aa7.29□□□□□ -1.24
Trim50-202ENSMUST00000111180 Tmem254cP0DN91 123 aa7.29□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 83.5 ms