RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 A0A286YE02 88 aa11.81□□□□□ -0.52
Ttc39a-203ENSMUST00000106619 Lamtor3O88653 124 aa11.79□□□□□ -0.52
Ttc39a-203ENSMUST00000106619 D130052B06RikQ3UW13 202 aa11.79□□□□□ -0.52
Ttc39a-203ENSMUST00000106619 Ighv10-3A0A075B5T6 119 aa11.79□□□□□ -0.52
Ttc39a-203ENSMUST00000106619 Vpreb3D3Z6J4 130 aa11.79□□□□□ -0.52
Ttc39a-203ENSMUST00000106619 Igkv3-7A0A0G2JE31 119 aa11.77□□□□□ -0.52
Ttc39a-203ENSMUST00000106619 Defa28D3Z1V9 94 aa11.77□□□□□ -0.52
Ttc39a-203ENSMUST00000106619 Igkv1-110A0A0B4J1I0 119 aa11.77□□□□□ -0.53
Ttc39a-203ENSMUST00000106619 Vpreb1P13372 142 aa11.77□□□□□ -0.53
Ttc39a-203ENSMUST00000106619 A830005F24RikQ8BRT5 167 aa11.76□□□□□ -0.53
Ttc39a-203ENSMUST00000106619 Vps25Q9CQ80 176 aa11.76□□□□□ -0.53
Ttc39a-203ENSMUST00000106619 Gm37389A0A0A6YW05 95 aa11.72□□□□□ -0.53
Ttc39a-203ENSMUST00000106619 Igkv8-27A0A0G2JF28 120 aa11.72□□□□□ -0.53
Ttc39a-203ENSMUST00000106619 Igkv8-30A0A140T8M3 121 aa11.72□□□□□ -0.53
Ttc39a-203ENSMUST00000106619 Vpreb2P13373 142 aa11.72□□□□□ -0.53
Ttc39a-203ENSMUST00000106619 Wfdc13Q5DQQ6 81 aa11.72□□□□□ -0.53
Ttc39a-203ENSMUST00000106619 Gm10401E9Q3K6 71 aa11.71□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 Ccdc179J3QM76 67 aa11.71□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 Xcl1P47993 114 aa11.71□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 ScxQ64124 207 aa11.71□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 Sfta2E9PXB6 77 aa11.69□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 Gm20726G3UX18 150 aa11.69□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 Gtf2h5Q8K2X8 71 aa11.69□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 P06320 134 aa11.69□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 Odf3bQ5M8M2 238 aa11.69□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 Defb39Q70KL3 74 aa11.69□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 Igkv3-5A0A140T8M6 119 aa11.68□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 Ryr1E9PZQ0 5035 aa11.68□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 SacsQ9JLC8 4582 aa11.66□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 HrnrQ8VHD8 2496 aa11.66□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 Hectd4E9Q2E4 4418 aa11.66□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 Cox6a2P43023 97 aa11.65□□□□□ -0.54
Ttc39a-203ENSMUST00000106619 Gm45213A0A0U1RNZ6 101 aa11.64□□□□□ -0.55
Ttc39a-203ENSMUST00000106619 Znf706Q9D115 76 aaKnown RBP11.64□□□□□ -0.55
Ttc39a-203ENSMUST00000106619 Lrp1bQ9JI18 4599 aa11.63□□□□□ -0.55
Ttc39a-203ENSMUST00000106619 Rbm3O89086 153 aaKnown RBP11.63□□□□□ -0.55
Ttc39a-203ENSMUST00000106619 A730071L15RikQ8C4X0 137 aa11.63□□□□□ -0.55
Ttc39a-203ENSMUST00000106619 Fam240bJ3QMB3 78 aa11.61□□□□□ -0.55
Ttc39a-203ENSMUST00000106619 Pde6gP09174 87 aa11.61□□□□□ -0.55
Ttc39a-203ENSMUST00000106619 Trav14d-3-dv8A0A075B619 120 aa11.6□□□□□ -0.55
Ttc39a-203ENSMUST00000106619 Igkv8-28A0A0G2JE47 121 aa11.6□□□□□ -0.55
Ttc39a-203ENSMUST00000106619 Gm10308Q9CVR5 141 aa11.59□□□□□ -0.55
Ttc39a-203ENSMUST00000106619 Gm12353A2AGJ4 60 aa11.58□□□□□ -0.56
Ttc39a-203ENSMUST00000106619 Bean1Q9EQG5 255 aa11.58□□□□□ -0.56
Ttc39a-203ENSMUST00000106619 Rpl37aP61514 92 aa11.57□□□□□ -0.56
Ttc39a-203ENSMUST00000106619 Sprr2jO70561 109 aa11.56□□□□□ -0.56
Ttc39a-203ENSMUST00000106619 Inafm2A0A1L1STD6 152 aa11.56□□□□□ -0.56
Ttc39a-203ENSMUST00000106619 Chchd10Q7TNL9 138 aa11.54□□□□□ -0.56
Ttc39a-203ENSMUST00000106619 Q8BT88 171 aa11.54□□□□□ -0.56
Ttc39a-203ENSMUST00000106619 Ormdl1Q921I0 153 aa11.54□□□□□ -0.56
Ttc39a-203ENSMUST00000106619 Lyrm7Q9DA03 104 aa11.54□□□□□ -0.56
Ttc39a-203ENSMUST00000106619 Cdip1Q9DB75 208 aa11.53□□□□□ -0.56
Ttc39a-203ENSMUST00000106619 1700018G05RikA0A1B0GSI2 66 aa11.52□□□□□ -0.57
Ttc39a-203ENSMUST00000106619 Cypt14J3QPF7 87 aa11.51□□□□□ -0.57
Ttc39a-203ENSMUST00000106619 Pkhd1l1Q80ZA4 4249 aa11.51□□□□□ -0.57
Ttc39a-203ENSMUST00000106619 Anapc11Q9CPX9 84 aa11.51□□□□□ -0.57
Ttc39a-203ENSMUST00000106619 Mrpl55Q9CZ83 127 aa11.49□□□□□ -0.57
Ttc39a-203ENSMUST00000106619 Fat2Q5F226 4351 aa11.48□□□□□ -0.57
Ttc39a-203ENSMUST00000106619 Trav3-1Q5R1I8 114 aa11.46□□□□□ -0.57
Ttc39a-203ENSMUST00000106619 Vps13bQ80TY5 3993 aa11.46□□□□□ -0.57
Ttc39a-203ENSMUST00000106619 Cby1Q9D1C2 127 aa11.46□□□□□ -0.58
Ttc39a-203ENSMUST00000106619 RetnlbQ99P86 105 aa11.45□□□□□ -0.58
Ttc39a-203ENSMUST00000106619 Kmt2cQ8BRH4 4903 aa11.45□□□□□ -0.58
Ttc39a-203ENSMUST00000106619 Gm28230A0A0A0MQ91 144 aa11.44□□□□□ -0.58
Ttc39a-203ENSMUST00000106619 Igf1P05017 153 aa11.43□□□□□ -0.58
Ttc39a-203ENSMUST00000106619 Igkv8-21A0A140T8P7 120 aa11.42□□□□□ -0.58
Ttc39a-203ENSMUST00000106619 Defa25Q5G864 92 aa11.41□□□□□ -0.58
Ttc39a-203ENSMUST00000106619 Dnah8Q91XQ0 4731 aa11.41□□□□□ -0.58
Ttc39a-203ENSMUST00000106619 Igkv3-4A0A140T8Q4 119 aa11.41□□□□□ -0.58
Ttc39a-203ENSMUST00000106619 4930535I16RikQ9CUI2 172 aa11.4□□□□□ -0.58
Ttc39a-203ENSMUST00000106619 Ubl5Q9EPV8 73 aa11.38□□□□□ -0.59
Ttc39a-203ENSMUST00000106619 Igkv3-10A0A0G2JGN0 119 aa11.36□□□□□ -0.59
Ttc39a-203ENSMUST00000106619 Gm37013Q8K491 104 aa11.36□□□□□ -0.59
Ttc39a-203ENSMUST00000106619 Gm44790A0A0N4SV91 103 aa11.36□□□□□ -0.59
Ttc39a-203ENSMUST00000106619 Tmem213Q08EA8 116 aa11.35□□□□□ -0.59
Ttc39a-203ENSMUST00000106619 Mrpl34Q99N91 92 aa11.34□□□□□ -0.59
Ttc39a-203ENSMUST00000106619 BatfO35284 125 aa11.33□□□□□ -0.6
Ttc39a-203ENSMUST00000106619 Krtap19-5O08632 62 aa11.31□□□□□ -0.6
Ttc39a-203ENSMUST00000106619 C130032M10RikQ8C888 123 aa11.31□□□□□ -0.6
Ttc39a-203ENSMUST00000106619 UqcrqQ9CQ69 82 aa11.31□□□□□ -0.6
Ttc39a-203ENSMUST00000106619 MplkipQ9D011 178 aa11.31□□□□□ -0.6
Ttc39a-203ENSMUST00000106619 Gm21886J3QJU9 214 aa11.28□□□□□ -0.6
Ttc39a-203ENSMUST00000106619 Tmem254aP0DN89 123 aa11.27□□□□□ -0.61
Ttc39a-203ENSMUST00000106619 Tmem254bP0DN90 123 aa11.27□□□□□ -0.61
Ttc39a-203ENSMUST00000106619 Tmem254cP0DN91 123 aa11.27□□□□□ -0.61
Ttc39a-203ENSMUST00000106619 Gm16253D3Z167 63 aa11.26□□□□□ -0.61
Ttc39a-203ENSMUST00000106619 Defb12Q8K4N3 78 aa11.26□□□□□ -0.61
Ttc39a-203ENSMUST00000106619 Gm20604F8WIA3 75 aa11.26□□□□□ -0.61
Ttc39a-203ENSMUST00000106619 Gm17689B3GLJ4 109 aa11.24□□□□□ -0.61
Ttc39a-203ENSMUST00000106619 Fat3Q8BNA6 4555 aa11.2□□□□□ -0.62
Ttc39a-203ENSMUST00000106619 Spaca4Q80ZQ0 127 aa11.2□□□□□ -0.62
Ttc39a-203ENSMUST00000106619 Lrp1Q91ZX7 4545 aaKnown RBP11.16□□□□□ -0.62
Ttc39a-203ENSMUST00000106619 Dph3Q8K0W9 82 aa11.13□□□□□ -0.63
Ttc39a-203ENSMUST00000106619 Reg3aO09037 175 aa11.12□□□□□ -0.63
Ttc39a-203ENSMUST00000106619 Herc2Q4U2R1 4836 aa11.11□□□□□ -0.63
Ttc39a-203ENSMUST00000106619 Abca13Q5SSE9 5034 aa11.11□□□□□ -0.63
Ttc39a-203ENSMUST00000106619 Birc6O88738 4882 aa11.11□□□□□ -0.63
Ttc39a-203ENSMUST00000106619 Atp5eP56382 52 aa11.11□□□□□ -0.63
Ttc39a-203ENSMUST00000106619 Hist1h4aP62806 103 aaKnown RBP11.11□□□□□ -0.63
Ttc39a-203ENSMUST00000106619 Igkv8-19A0A0G2JFN8 121 aa11.09□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms