RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Gm35339A0A140LHH9 1649 aa41.04■■■■■ 4.16
Ttc39a-203ENSMUST00000106619 NischQ80TM9 1593 aa40.93■■■■■ 4.14
Ttc39a-203ENSMUST00000106619 Abcc9P70170 1546 aa39.73■■■■□ 3.95
Ttc39a-203ENSMUST00000106619 Abcc8B2RUS7 1588 aa39.29■■■■□ 3.88
Ttc39a-203ENSMUST00000106619 ScribQ80U72 1612 aa37.27■■■■□ 3.56
Ttc39a-203ENSMUST00000106619 Dcaf1Q80TR8 1506 aa36.5■■■■□ 3.43
Ttc39a-203ENSMUST00000106619 Rhox8Q6VSS7 320 aa36.29■■■■□ 3.4
Ttc39a-203ENSMUST00000106619 Kdm5dQ62240 1548 aa36.29■■■■□ 3.4
Ttc39a-203ENSMUST00000106619 NacadQ5SWP3 1504 aa36.23■■■■□ 3.39
Ttc39a-203ENSMUST00000106619 Rb1cc1Q9ESK9 1588 aa35.75■■■■□ 3.31
Ttc39a-203ENSMUST00000106619 Sycp2Q9CUU3 1500 aa35.48■■■■□ 3.27
Ttc39a-203ENSMUST00000106619 Ccdc180J3QNE4 1664 aa35.47■■■■□ 3.27
Ttc39a-203ENSMUST00000106619 Baz1aO88379 1555 aa35.34■■■■□ 3.25
Ttc39a-203ENSMUST00000106619 Crybg2B7ZCC2 1516 aa35.07■■■■□ 3.2
Ttc39a-203ENSMUST00000106619 Rtl1Q7M732 1744 aa34.82■■■■□ 3.17
Ttc39a-203ENSMUST00000106619 BicraF8VPZ9 1578 aa34.81■■■■□ 3.16
Ttc39a-203ENSMUST00000106619 Zcchc6Q5BLK4 1491 aaKnown RBP34.61■■■■□ 3.13
Ttc39a-203ENSMUST00000106619 Smarca2Q6DIC0 1577 aa34.42■■■■□ 3.1
Ttc39a-203ENSMUST00000106619 Cecr2E9Q2Z1 1453 aa33.85■■■■□ 3.01
Ttc39a-203ENSMUST00000106619 Ccdc136Q3TVA9 1136 aa33.8■■■■□ 3
Ttc39a-203ENSMUST00000106619 Smarca4Q3TKT4 1613 aaKnown RBP33.65■■■□□ 2.98
Ttc39a-203ENSMUST00000106619 Pds5bQ4VA53 1446 aaKnown RBP33.63■■■□□ 2.97
Ttc39a-203ENSMUST00000106619 Atad2bE9Q166 1460 aaKnown RBP33.53■■■□□ 2.96
Ttc39a-203ENSMUST00000106619 Brd4Q9ESU6 1400 aaKnown RBP33.5■■■□□ 2.95
Ttc39a-203ENSMUST00000106619 Trim41Q5NCC3 630 aa33.37■■■□□ 2.93
Ttc39a-203ENSMUST00000106619 Synj1Q8CHC4 1574 aa33.33■■■□□ 2.93
Ttc39a-203ENSMUST00000106619 Iqgap2Q3UQ44 1575 aa33.32■■■□□ 2.92
Ttc39a-203ENSMUST00000106619 CftrP26361 1476 aa33.3■■■□□ 2.92
Ttc39a-203ENSMUST00000106619 Cttnbp2B9EJA2 1648 aa33.23■■■□□ 2.91
Ttc39a-203ENSMUST00000106619 Thoc2B1AZI6 1594 aaKnown RBP32.96■■■□□ 2.87
Ttc39a-203ENSMUST00000106619 Ercc6F8VPZ5 1481 aa32.93■■■□□ 2.86
Ttc39a-203ENSMUST00000106619 Wdr62Q3U3T8 1523 aa32.89■■■□□ 2.86
Ttc39a-203ENSMUST00000106619 Frmpd1A2AKB4 1549 aa32.83■■■□□ 2.85
Ttc39a-203ENSMUST00000106619 Esf1Q3V1V3 845 aaKnown RBP32.7■■■□□ 2.83
Ttc39a-203ENSMUST00000106619 Golga3P55937 1487 aa32.68■■■□□ 2.82
Ttc39a-203ENSMUST00000106619 Top2bQ64511 1612 aa32.53■■■□□ 2.8
Ttc39a-203ENSMUST00000106619 Cngb1E1AZ71 1325 aa32.47■■■□□ 2.79
Ttc39a-203ENSMUST00000106619 Cc2d2aQ8CFW7 1633 aa32.46■■■□□ 2.79
Ttc39a-203ENSMUST00000106619 Fam135aQ6NS59 1506 aa32.44■■■□□ 2.78
Ttc39a-203ENSMUST00000106619 HrcG5E8J6 738 aa32.42■■■□□ 2.78
Ttc39a-203ENSMUST00000106619 Phldb1Q6PDH0 1371 aaKnown RBP32.4■■■□□ 2.78
Ttc39a-203ENSMUST00000106619 Unc13aQ4KUS2 1712 aa32.4■■■□□ 2.78
Ttc39a-203ENSMUST00000106619 Dnajc5bQ9CQ94 199 aa32.3■■■□□ 2.76
Ttc39a-203ENSMUST00000106619 Rsf1E9PWW9 1441 aaKnown RBP32.13■■■□□ 2.73
Ttc39a-203ENSMUST00000106619 Fmn1Q05860 1466 aa32.11■■■□□ 2.73
Ttc39a-203ENSMUST00000106619 Baz1bQ9Z277 1479 aa32.1■■■□□ 2.73
Ttc39a-203ENSMUST00000106619 Lamc3Q9R0B6 1581 aa32.1■■■□□ 2.73
Ttc39a-203ENSMUST00000106619 Ccdc88bQ4QRL3 1481 aa32.06■■■□□ 2.72
Ttc39a-203ENSMUST00000106619 TnnQ80Z71 1560 aa32.05■■■□□ 2.72
Ttc39a-203ENSMUST00000106619 Ubl4bQ9CQ84 188 aa32.02■■■□□ 2.72
Ttc39a-203ENSMUST00000106619 Kif15Q6P9L6 1387 aa31.98■■■□□ 2.71
Ttc39a-203ENSMUST00000106619 Cep164Q5DU05 1446 aa31.95■■■□□ 2.7
Ttc39a-203ENSMUST00000106619 Chic1Q8CBW7 227 aa31.93■■■□□ 2.7
Ttc39a-203ENSMUST00000106619 Cux2P70298 1426 aa31.74■■■□□ 2.67
Ttc39a-203ENSMUST00000106619 Top2aQ01320 1528 aaKnown RBP31.72■■■□□ 2.67
Ttc39a-203ENSMUST00000106619 Mrc2Q64449 1479 aa31.67■■■□□ 2.66
Ttc39a-203ENSMUST00000106619 Camsap1A2AHC3 1581 aa31.63■■■□□ 2.65
Ttc39a-203ENSMUST00000106619 Ccdc18Q640L5 1455 aa31.6■■■□□ 2.65
Ttc39a-203ENSMUST00000106619 Npm1Q61937 292 aaKnown RBP31.44■■■□□ 2.62
Ttc39a-203ENSMUST00000106619 Il27Q8K3I6 234 aa31.41■■■□□ 2.62
Ttc39a-203ENSMUST00000106619 Grin2bQ01097 1482 aa31.3■■■□□ 2.6
Ttc39a-203ENSMUST00000106619 Gab3Q8BSM5 595 aa31.29■■■□□ 2.6
Ttc39a-203ENSMUST00000106619 LrpprcQ6PB66 1392 aaKnown RBP31.28■■■□□ 2.6
Ttc39a-203ENSMUST00000106619 Kif21aQ9QXL2 1672 aa31.25■■■□□ 2.59
Ttc39a-203ENSMUST00000106619 NrkQ9R0G8 1455 aa31.23■■■□□ 2.59
Ttc39a-203ENSMUST00000106619 PogzQ8BZH4 1409 aaKnown RBP31.18■■■□□ 2.58
Ttc39a-203ENSMUST00000106619 Rapgef2Q8CHG7 1496 aa31.18■■■□□ 2.58
Ttc39a-203ENSMUST00000106619 Dhx29Q6PGC1 1365 aaKnown RBP31.15■■■□□ 2.58
Ttc39a-203ENSMUST00000106619 Shroom4Q1W617 1475 aa31.12■■■□□ 2.57
Ttc39a-203ENSMUST00000106619 PtprkP35822 1457 aa31.09■■■□□ 2.57
Ttc39a-203ENSMUST00000106619 Duox2A2AQ99 1517 aa31.05■■■□□ 2.56
Ttc39a-203ENSMUST00000106619 Efcab5A0JP43 1406 aa31.04■■■□□ 2.56
Ttc39a-203ENSMUST00000106619 Crocc2F6XLV1 1638 aa31.01■■■□□ 2.55
Ttc39a-203ENSMUST00000106619 Npm2Q80W85 207 aa30.94■■■□□ 2.54
Ttc39a-203ENSMUST00000106619 Cep162Q6ZQ06 1403 aa30.93■■■□□ 2.54
Ttc39a-203ENSMUST00000106619 Eif4g1Q6NZJ6 1600 aaKnown RBP30.91■■■□□ 2.54
Ttc39a-203ENSMUST00000106619 Lrriq1Q0P5X1 1673 aa30.89■■■□□ 2.54
Ttc39a-203ENSMUST00000106619 Samd9lQ69Z37 1561 aa30.84■■■□□ 2.53
Ttc39a-203ENSMUST00000106619 Plb1Q3TTY0 1478 aa30.83■■■□□ 2.53
Ttc39a-203ENSMUST00000106619 Urb2E9Q7L1 1524 aaKnown RBP30.83■■■□□ 2.53
Ttc39a-203ENSMUST00000106619 Arhgap35Q91YM2 1499 aa30.8■■■□□ 2.52
Ttc39a-203ENSMUST00000106619 Map3k1P53349 1493 aa30.76■■■□□ 2.51
Ttc39a-203ENSMUST00000106619 Mroh2bQ7M6Y6 1581 aa30.75■■■□□ 2.51
Ttc39a-203ENSMUST00000106619 SynmQ70IV5 1561 aa30.64■■■□□ 2.5
Ttc39a-203ENSMUST00000106619 Ift140E9PY46 1464 aa30.64■■■□□ 2.5
Ttc39a-203ENSMUST00000106619 Zeb1Q64318 1117 aa30.61■■■□□ 2.49
Ttc39a-203ENSMUST00000106619 Disp1Q3TDN0 1521 aa30.59■■■□□ 2.49
Ttc39a-203ENSMUST00000106619 AqrQ8CFQ3 1481 aaKnown RBP30.59■■■□□ 2.49
Ttc39a-203ENSMUST00000106619 Rad54l2Q99NG0 1466 aa30.59■■■□□ 2.49
Ttc39a-203ENSMUST00000106619 Myt1lP97500 1187 aa30.56■■■□□ 2.48
Ttc39a-203ENSMUST00000106619 Magi3Q9EQJ9 1476 aa30.5■■■□□ 2.47
Ttc39a-203ENSMUST00000106619 Pbrm1Q8BSQ9 1634 aaKnown RBP30.49■■■□□ 2.47
Ttc39a-203ENSMUST00000106619 Carmil1Q6EDY6 1374 aa30.49■■■□□ 2.47
Ttc39a-203ENSMUST00000106619 Clip1Q922J3 1391 aa30.49■■■□□ 2.47
Ttc39a-203ENSMUST00000106619 Eif4g3Q80XI3 1579 aaKnown RBP30.48■■■□□ 2.47
Ttc39a-203ENSMUST00000106619 Grin2aP35436 1464 aa30.46■■■□□ 2.47
Ttc39a-203ENSMUST00000106619 Nup160Q9Z0W3 1402 aaKnown RBP30.44■■■□□ 2.46
Ttc39a-203ENSMUST00000106619 Pla2r1Q62028 1487 aa30.44■■■□□ 2.46
Ttc39a-203ENSMUST00000106619 Gpatch8A2A6A1 1505 aa30.41■■■□□ 2.46
Ttc39a-203ENSMUST00000106619 Setd1bQ8CFT2 1985 aa30.35■■■□□ 2.45
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms