RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Defb47Q30KN1 79 aa11.19□□□□□ -0.62
Vti1b-201ENSMUST00000055262 Fat2Q5F226 4351 aa11.19□□□□□ -0.62
Vti1b-201ENSMUST00000055262 5930422O12RikQ8C4Y4 123 aa11.19□□□□□ -0.62
Vti1b-201ENSMUST00000055262 Hint1P70349 126 aaKnown RBP11.18□□□□□ -0.62
Vti1b-201ENSMUST00000055262 A930002H24RikQ8C8Y3 163 aa11.18□□□□□ -0.62
Vti1b-201ENSMUST00000055262 Q9DAA3 117 aa11.18□□□□□ -0.62
Vti1b-201ENSMUST00000055262 Gm10139O88245 57 aa11.17□□□□□ -0.62
Vti1b-201ENSMUST00000055262 Gm29423A0A087WRM1 55 aa11.16□□□□□ -0.62
Vti1b-201ENSMUST00000055262 Rpl39lQ9CQD0 51 aa11.16□□□□□ -0.62
Vti1b-201ENSMUST00000055262 Igkv1-122A0A140T8M9 119 aa11.15□□□□□ -0.62
Vti1b-201ENSMUST00000055262 A0A286YCQ8 80 aa11.15□□□□□ -0.62
Vti1b-201ENSMUST00000055262 BtcQ05928 177 aa11.15□□□□□ -0.62
Vti1b-201ENSMUST00000055262 CenpwQ3URR0 86 aa11.15□□□□□ -0.62
Vti1b-201ENSMUST00000055262 HrnrQ8VHD8 2496 aa11.15□□□□□ -0.62
Vti1b-201ENSMUST00000055262 HydinQ80W93 5154 aa11.14□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Tax1bp3Q9DBG9 124 aa11.14□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Gm18596A0A1W2P860 280 aa11.12□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Igkv1-35A0A0G2JDE5 120 aa11.12□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Tmem243B2RVB9 118 aa11.12□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Bean1Q9EQG5 255 aa11.12□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Lrp1Q91ZX7 4545 aaKnown RBP11.11□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Igkv8-26A0A075B5N5 123 aa11.11□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Odf3bQ5M8M2 238 aa11.11□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Cox6cQ9CPQ1 76 aa11.11□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Znf706Q9D115 76 aaKnown RBP11.11□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Igkv3-5A0A140T8M6 119 aa11.09□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Defa28D3Z1V9 94 aa11.09□□□□□ -0.63
Vti1b-201ENSMUST00000055262 Defb37Q7TMD2 62 aa11.08□□□□□ -0.64
Vti1b-201ENSMUST00000055262 D6Ertd527eA0A0N4SWI3 464 aa11.07□□□□□ -0.64
Vti1b-201ENSMUST00000055262 A030005K14RikA0A1Y7VNY1 122 aa11.07□□□□□ -0.64
Vti1b-201ENSMUST00000055262 Gm10767Q3TQP0 103 aa11.07□□□□□ -0.64
Vti1b-201ENSMUST00000055262 Sigmar1O55242 223 aa11.06□□□□□ -0.64
Vti1b-201ENSMUST00000055262 Mycbp2Q7TPH6 4711 aa11.06□□□□□ -0.64
Vti1b-201ENSMUST00000055262 Vpreb3D3Z6J4 130 aa11.05□□□□□ -0.64
Vti1b-201ENSMUST00000055262 Spink13Q3UTS8 97 aa11.05□□□□□ -0.64
Vti1b-201ENSMUST00000055262 Pcp4l1Q6W8Q3 68 aa11.05□□□□□ -0.64
Vti1b-201ENSMUST00000055262 Wfdc13Q5DQQ6 81 aa11.04□□□□□ -0.64
Vti1b-201ENSMUST00000055262 4930524J08RikQ9CUJ5 163 aa11.04□□□□□ -0.64
Vti1b-201ENSMUST00000055262 A0A286YE02 88 aa11.02□□□□□ -0.65
Vti1b-201ENSMUST00000055262 NrepQ07475 68 aa11.02□□□□□ -0.65
Vti1b-201ENSMUST00000055262 Gm10135F6TEE5 83 aa11.01□□□□□ -0.65
Vti1b-201ENSMUST00000055262 A530084C06RikQ3UTW2 186 aa11.01□□□□□ -0.65
Vti1b-201ENSMUST00000055262 MturnQ8CGA4 131 aa11.01□□□□□ -0.65
Vti1b-201ENSMUST00000055262 Vpreb1P13372 142 aa11□□□□□ -0.65
Vti1b-201ENSMUST00000055262 Igkv2-109A0A075B5K6 120 aa10.99□□□□□ -0.65
Vti1b-201ENSMUST00000055262 Acyp1P56376 99 aa10.99□□□□□ -0.65
Vti1b-201ENSMUST00000055262 Anapc11Q9CPX9 84 aa10.99□□□□□ -0.65
Vti1b-201ENSMUST00000055262 1700020N15RikL7MTX3 112 aa10.95□□□□□ -0.66
Vti1b-201ENSMUST00000055262 Gm10401E9Q3K6 71 aa10.94□□□□□ -0.66
Vti1b-201ENSMUST00000055262 Cypt14J3QPF7 87 aa10.94□□□□□ -0.66
Vti1b-201ENSMUST00000055262 A830005F24RikQ8BRT5 167 aa10.94□□□□□ -0.66
Vti1b-201ENSMUST00000055262 Defb12Q8K4N3 78 aa10.94□□□□□ -0.66
Vti1b-201ENSMUST00000055262 Gm37389A0A0A6YW05 95 aa10.93□□□□□ -0.66
Vti1b-201ENSMUST00000055262 Lamtor3O88653 124 aa10.93□□□□□ -0.66
Vti1b-201ENSMUST00000055262 9530003J23RikQ8BM26 151 aa10.93□□□□□ -0.66
Vti1b-201ENSMUST00000055262 Gm26602M0QWA4 95 aa10.92□□□□□ -0.66
Vti1b-201ENSMUST00000055262 Gm28051J3QMA2 81 aa10.91□□□□□ -0.66
Vti1b-201ENSMUST00000055262 Gm9736A0A1W2P7N1 277 aa10.9□□□□□ -0.66
Vti1b-201ENSMUST00000055262 Gm11939A2A592 99 aa10.9□□□□□ -0.66
Vti1b-201ENSMUST00000055262 Defa25Q5G864 92 aa10.88□□□□□ -0.67
Vti1b-201ENSMUST00000055262 P06320 134 aa10.87□□□□□ -0.67
Vti1b-201ENSMUST00000055262 Sfta2E9PXB6 77 aa10.86□□□□□ -0.67
Vti1b-201ENSMUST00000055262 Herc1E9PZP8 4859 aa10.86□□□□□ -0.67
Vti1b-201ENSMUST00000055262 Igkv3-10A0A0G2JGN0 119 aa10.83□□□□□ -0.68
Vti1b-201ENSMUST00000055262 Vps25Q9CQ80 176 aa10.83□□□□□ -0.68
Vti1b-201ENSMUST00000055262 Cox6a2P43023 97 aa10.82□□□□□ -0.68
Vti1b-201ENSMUST00000055262 Chchd10Q7TNL9 138 aa10.82□□□□□ -0.68
Vti1b-201ENSMUST00000055262 Ifitm6A0A1B0GS75 124 aa10.81□□□□□ -0.68
Vti1b-201ENSMUST00000055262 Gm7102J3QQ10 178 aa10.81□□□□□ -0.68
Vti1b-201ENSMUST00000055262 Q8BT88 171 aa10.81□□□□□ -0.68
Vti1b-201ENSMUST00000055262 Ighv10-3A0A075B5T6 119 aa10.79□□□□□ -0.68
Vti1b-201ENSMUST00000055262 Gm12353A2AGJ4 60 aa10.79□□□□□ -0.68
Vti1b-201ENSMUST00000055262 Gm26920S4R2A5 56 aa10.79□□□□□ -0.68
Vti1b-201ENSMUST00000055262 Mtatp8P03930 67 aa10.78□□□□□ -0.68
Vti1b-201ENSMUST00000055262 Ube2v1Q9CZY3 147 aa10.78□□□□□ -0.68
Vti1b-201ENSMUST00000055262 Krtap3-2Q9D638 99 aa10.77□□□□□ -0.69
Vti1b-201ENSMUST00000055262 Krtap3-3Q9D7P0 99 aa10.77□□□□□ -0.69
Vti1b-201ENSMUST00000055262 Gm28230A0A0A0MQ91 144 aa10.75□□□□□ -0.69
Vti1b-201ENSMUST00000055262 Lrp2A2ARV4 4660 aa10.75□□□□□ -0.69
Vti1b-201ENSMUST00000055262 1700018G05RikA0A1B0GSI2 66 aa10.74□□□□□ -0.69
Vti1b-201ENSMUST00000055262 Gm17689B3GLJ4 109 aa10.74□□□□□ -0.69
Vti1b-201ENSMUST00000055262 Igkv8-27A0A0G2JF28 120 aa10.73□□□□□ -0.69
Vti1b-201ENSMUST00000055262 Igkv8-30A0A140T8M3 121 aa10.73□□□□□ -0.69
Vti1b-201ENSMUST00000055262 Rbm3O89086 153 aaKnown RBP10.69□□□□□ -0.7
Vti1b-201ENSMUST00000055262 Spaca4Q80ZQ0 127 aa10.69□□□□□ -0.7
Vti1b-201ENSMUST00000055262 Sprr2jO70561 109 aa10.68□□□□□ -0.7
Vti1b-201ENSMUST00000055262 Igkv8-28A0A0G2JE47 121 aa10.68□□□□□ -0.7
Vti1b-201ENSMUST00000055262 A730071L15RikQ8C4X0 137 aa10.68□□□□□ -0.7
Vti1b-201ENSMUST00000055262 Dph3Q8K0W9 82 aa10.68□□□□□ -0.7
Vti1b-201ENSMUST00000055262 Gm10308Q9CVR5 141 aa10.68□□□□□ -0.7
Vti1b-201ENSMUST00000055262 Igkv3-4A0A140T8Q4 119 aa10.66□□□□□ -0.7
Vti1b-201ENSMUST00000055262 A930033H14RikG5E8X6 103 aa10.66□□□□□ -0.7
Vti1b-201ENSMUST00000055262 Pde6gP09174 87 aa10.65□□□□□ -0.7
Vti1b-201ENSMUST00000055262 Gm16253D3Z167 63 aa10.64□□□□□ -0.71
Vti1b-201ENSMUST00000055262 Cby1Q9D1C2 127 aa10.64□□□□□ -0.71
Vti1b-201ENSMUST00000055262 Gm21886J3QJU9 214 aa10.63□□□□□ -0.71
Vti1b-201ENSMUST00000055262 Rps29P62274 56 aa10.63□□□□□ -0.71
Vti1b-201ENSMUST00000055262 Prm1P02319 51 aa10.61□□□□□ -0.71
Vti1b-201ENSMUST00000055262 GhrhP16043 103 aa10.61□□□□□ -0.71
Vti1b-201ENSMUST00000055262 4930535I16RikQ9CUI2 172 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms