RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Gm35339A0A140LHH9 1649 aa41.28■■■■■ 4.2
Vti1b-201ENSMUST00000055262 NischQ80TM9 1593 aa40.84■■■■■ 4.13
Vti1b-201ENSMUST00000055262 Abcc9P70170 1546 aa39.55■■■■□ 3.92
Vti1b-201ENSMUST00000055262 Abcc8B2RUS7 1588 aa39.43■■■■□ 3.9
Vti1b-201ENSMUST00000055262 ScribQ80U72 1612 aa37.93■■■■□ 3.66
Vti1b-201ENSMUST00000055262 NacadQ5SWP3 1504 aa36.76■■■■□ 3.47
Vti1b-201ENSMUST00000055262 Kdm5dQ62240 1548 aa36.74■■■■□ 3.47
Vti1b-201ENSMUST00000055262 Dcaf1Q80TR8 1506 aa36.29■■■■□ 3.4
Vti1b-201ENSMUST00000055262 Sycp2Q9CUU3 1500 aa36.03■■■■□ 3.36
Vti1b-201ENSMUST00000055262 Rb1cc1Q9ESK9 1588 aa35.64■■■■□ 3.3
Vti1b-201ENSMUST00000055262 Rhox8Q6VSS7 320 aa35.51■■■■□ 3.28
Vti1b-201ENSMUST00000055262 BicraF8VPZ9 1578 aa35.5■■■■□ 3.27
Vti1b-201ENSMUST00000055262 Baz1aO88379 1555 aa35.13■■■■□ 3.21
Vti1b-201ENSMUST00000055262 Ccdc180J3QNE4 1664 aa35.06■■■■□ 3.2
Vti1b-201ENSMUST00000055262 Crybg2B7ZCC2 1516 aa34.88■■■■□ 3.18
Vti1b-201ENSMUST00000055262 Zcchc6Q5BLK4 1491 aaKnown RBP34.63■■■■□ 3.13
Vti1b-201ENSMUST00000055262 Pds5bQ4VA53 1446 aaKnown RBP34.48■■■■□ 3.11
Vti1b-201ENSMUST00000055262 Dnajc5bQ9CQ94 199 aa34.27■■■■□ 3.08
Vti1b-201ENSMUST00000055262 Atad2bE9Q166 1460 aaKnown RBP34.18■■■■□ 3.06
Vti1b-201ENSMUST00000055262 Thoc2B1AZI6 1594 aaKnown RBP34.13■■■■□ 3.05
Vti1b-201ENSMUST00000055262 Smarca2Q6DIC0 1577 aa34.11■■■■□ 3.05
Vti1b-201ENSMUST00000055262 Smarca4Q3TKT4 1613 aaKnown RBP33.99■■■■□ 3.03
Vti1b-201ENSMUST00000055262 Cecr2E9Q2Z1 1453 aa33.95■■■■□ 3.02
Vti1b-201ENSMUST00000055262 Rtl1Q7M732 1744 aa33.83■■■■□ 3.01
Vti1b-201ENSMUST00000055262 Ercc6F8VPZ5 1481 aa33.81■■■■□ 3
Vti1b-201ENSMUST00000055262 Iqgap2Q3UQ44 1575 aa33.79■■■■□ 3
Vti1b-201ENSMUST00000055262 Cc2d2aQ8CFW7 1633 aa33.61■■■□□ 2.97
Vti1b-201ENSMUST00000055262 Wdr62Q3U3T8 1523 aa33.46■■■□□ 2.95
Vti1b-201ENSMUST00000055262 Frmpd1A2AKB4 1549 aa33.4■■■□□ 2.94
Vti1b-201ENSMUST00000055262 Fam135aQ6NS59 1506 aa33.4■■■□□ 2.94
Vti1b-201ENSMUST00000055262 CftrP26361 1476 aa33.2■■■□□ 2.91
Vti1b-201ENSMUST00000055262 Ccdc136Q3TVA9 1136 aa33.18■■■□□ 2.9
Vti1b-201ENSMUST00000055262 Phldb1Q6PDH0 1371 aaKnown RBP33.18■■■□□ 2.9
Vti1b-201ENSMUST00000055262 Synj1Q8CHC4 1574 aa33.17■■■□□ 2.9
Vti1b-201ENSMUST00000055262 Cttnbp2B9EJA2 1648 aa33.17■■■□□ 2.9
Vti1b-201ENSMUST00000055262 Brd4Q9ESU6 1400 aaKnown RBP33.16■■■□□ 2.9
Vti1b-201ENSMUST00000055262 Baz1bQ9Z277 1479 aa32.96■■■□□ 2.87
Vti1b-201ENSMUST00000055262 Unc13aQ4KUS2 1712 aa32.94■■■□□ 2.86
Vti1b-201ENSMUST00000055262 Ubl4bQ9CQ84 188 aa32.86■■■□□ 2.85
Vti1b-201ENSMUST00000055262 Esf1Q3V1V3 845 aaKnown RBP32.65■■■□□ 2.82
Vti1b-201ENSMUST00000055262 Trim41Q5NCC3 630 aa32.64■■■□□ 2.82
Vti1b-201ENSMUST00000055262 Mrc2Q64449 1479 aa32.63■■■□□ 2.81
Vti1b-201ENSMUST00000055262 Rsf1E9PWW9 1441 aaKnown RBP32.37■■■□□ 2.77
Vti1b-201ENSMUST00000055262 Kif15Q6P9L6 1387 aa32.3■■■□□ 2.76
Vti1b-201ENSMUST00000055262 Cux2P70298 1426 aa32.23■■■□□ 2.75
Vti1b-201ENSMUST00000055262 Lamc3Q9R0B6 1581 aa32.19■■■□□ 2.74
Vti1b-201ENSMUST00000055262 Golga3P55937 1487 aa32.07■■■□□ 2.72
Vti1b-201ENSMUST00000055262 Top2bQ64511 1612 aa31.99■■■□□ 2.71
Vti1b-201ENSMUST00000055262 Cngb1E1AZ71 1325 aa31.98■■■□□ 2.71
Vti1b-201ENSMUST00000055262 Kif21aQ9QXL2 1672 aa31.95■■■□□ 2.71
Vti1b-201ENSMUST00000055262 Lrriq1Q0P5X1 1673 aa31.9■■■□□ 2.7
Vti1b-201ENSMUST00000055262 Npm1Q61937 292 aaKnown RBP31.89■■■□□ 2.7
Vti1b-201ENSMUST00000055262 TnnQ80Z71 1560 aa31.89■■■□□ 2.7
Vti1b-201ENSMUST00000055262 Cep164Q5DU05 1446 aa31.81■■■□□ 2.68
Vti1b-201ENSMUST00000055262 Ccdc18Q640L5 1455 aa31.73■■■□□ 2.67
Vti1b-201ENSMUST00000055262 Il27Q8K3I6 234 aa31.69■■■□□ 2.66
Vti1b-201ENSMUST00000055262 Fmn1Q05860 1466 aa31.67■■■□□ 2.66
Vti1b-201ENSMUST00000055262 Camsap1A2AHC3 1581 aa31.66■■■□□ 2.66
Vti1b-201ENSMUST00000055262 Dhx29Q6PGC1 1365 aaKnown RBP31.57■■■□□ 2.64
Vti1b-201ENSMUST00000055262 LrpprcQ6PB66 1392 aaKnown RBP31.52■■■□□ 2.64
Vti1b-201ENSMUST00000055262 Eif4g3Q80XI3 1579 aaKnown RBP31.46■■■□□ 2.63
Vti1b-201ENSMUST00000055262 Urb2E9Q7L1 1524 aaKnown RBP31.46■■■□□ 2.63
Vti1b-201ENSMUST00000055262 Plb1Q3TTY0 1478 aa31.43■■■□□ 2.62
Vti1b-201ENSMUST00000055262 Crocc2F6XLV1 1638 aa31.42■■■□□ 2.62
Vti1b-201ENSMUST00000055262 PogzQ8BZH4 1409 aaKnown RBP31.36■■■□□ 2.61
Vti1b-201ENSMUST00000055262 Ccdc88bQ4QRL3 1481 aa31.26■■■□□ 2.6
Vti1b-201ENSMUST00000055262 Grin2bQ01097 1482 aa31.24■■■□□ 2.59
Vti1b-201ENSMUST00000055262 Duox2A2AQ99 1517 aa31.21■■■□□ 2.59
Vti1b-201ENSMUST00000055262 Ift140E9PY46 1464 aa31.15■■■□□ 2.58
Vti1b-201ENSMUST00000055262 Top2aQ01320 1528 aaKnown RBP31.1■■■□□ 2.57
Vti1b-201ENSMUST00000055262 HrcG5E8J6 738 aa31.04■■■□□ 2.56
Vti1b-201ENSMUST00000055262 Chic1Q8CBW7 227 aa31.04■■■□□ 2.56
Vti1b-201ENSMUST00000055262 Rusc2Q80U22 1514 aa31.03■■■□□ 2.56
Vti1b-201ENSMUST00000055262 Samd9lQ69Z37 1561 aa31.01■■■□□ 2.55
Vti1b-201ENSMUST00000055262 Efcab5A0JP43 1406 aa30.98■■■□□ 2.55
Vti1b-201ENSMUST00000055262 Disp1Q3TDN0 1521 aa30.95■■■□□ 2.54
Vti1b-201ENSMUST00000055262 Shroom2A2ALU4 1481 aa30.94■■■□□ 2.54
Vti1b-201ENSMUST00000055262 NrkQ9R0G8 1455 aa30.9■■■□□ 2.54
Vti1b-201ENSMUST00000055262 Pbrm1Q8BSQ9 1634 aaKnown RBP30.83■■■□□ 2.53
Vti1b-201ENSMUST00000055262 Dnajc5P60904 198 aa30.82■■■□□ 2.52
Vti1b-201ENSMUST00000055262 Nup160Q9Z0W3 1402 aaKnown RBP30.81■■■□□ 2.52
Vti1b-201ENSMUST00000055262 Shroom4Q1W617 1475 aa30.8■■■□□ 2.52
Vti1b-201ENSMUST00000055262 Rad54l2Q99NG0 1466 aa30.79■■■□□ 2.52
Vti1b-201ENSMUST00000055262 PtprkP35822 1457 aa30.77■■■□□ 2.52
Vti1b-201ENSMUST00000055262 Cc2d2bA0A286YDU8 1405 aa30.74■■■□□ 2.51
Vti1b-201ENSMUST00000055262 Grin2aP35436 1464 aa30.69■■■□□ 2.5
Vti1b-201ENSMUST00000055262 Magi3Q9EQJ9 1476 aa30.69■■■□□ 2.5
Vti1b-201ENSMUST00000055262 Setd1bQ8CFT2 1985 aa30.67■■■□□ 2.5
Vti1b-201ENSMUST00000055262 Pabpn1Q8CCS6 302 aaKnown RBP30.67■■■□□ 2.5
Vti1b-201ENSMUST00000055262 SynmQ70IV5 1561 aa30.6■■■□□ 2.49
Vti1b-201ENSMUST00000055262 AqrQ8CFQ3 1481 aaKnown RBP30.58■■■□□ 2.49
Vti1b-201ENSMUST00000055262 Pelp1Q9DBD5 1123 aaKnown RBP30.57■■■□□ 2.48
Vti1b-201ENSMUST00000055262 Zeb1Q64318 1117 aa30.54■■■□□ 2.48
Vti1b-201ENSMUST00000055262 Pla2r1Q62028 1487 aa30.54■■■□□ 2.48
Vti1b-201ENSMUST00000055262 Gpatch8A2A6A1 1505 aa30.48■■■□□ 2.47
Vti1b-201ENSMUST00000055262 Col17a1Q07563 1470 aa30.47■■■□□ 2.47
Vti1b-201ENSMUST00000055262 Npm2Q80W85 207 aa30.47■■■□□ 2.47
Vti1b-201ENSMUST00000055262 Fgd6Q69ZL1 1399 aa30.4■■■□□ 2.46
Vti1b-201ENSMUST00000055262 Mroh2bQ7M6Y6 1581 aa30.37■■■□□ 2.45
Vti1b-201ENSMUST00000055262 Gab3Q8BSM5 595 aa30.34■■■□□ 2.45
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms