RNA–Protein interactions for RNA: ENSMUST00000030185.4

Tpm1-201, Transcript of Tropomyosin alpha-1 chain, mousemouse

APPRIS ALT1 TSL 2 BASIC

Gene Tpm1, Length 1,797 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-201ENSMUST00000030185 1700020N15RikL7MTX3 112 aa7.36□□□□□ -1.23
Tpm1-201ENSMUST00000030185 TeppQ6IMH0 216 aa7.36□□□□□ -1.23
Tpm1-201ENSMUST00000030185 Fam19a3Q7TPG6 132 aa7.36□□□□□ -1.23
Tpm1-201ENSMUST00000030185 Gtf2h5Q8K2X8 71 aa7.36□□□□□ -1.23
Tpm1-201ENSMUST00000030185 Tnp2P11378 117 aa7.36□□□□□ -1.23
Tpm1-201ENSMUST00000030185 AI606181Q8C7B9 129 aa7.36□□□□□ -1.23
Tpm1-201ENSMUST00000030185 Gm45213A0A0U1RNZ6 101 aa7.35□□□□□ -1.23
Tpm1-201ENSMUST00000030185 A930002H24RikQ8C8Y3 163 aa7.34□□□□□ -1.23
Tpm1-201ENSMUST00000030185 Gm10767Q3TQP0 103 aa7.33□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Gm27235Q3UW50 83 aa7.33□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Igkv1-122A0A140T8M9 119 aa7.31□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Gm10570F6VB42 170 aa7.31□□□□□ -1.24
Tpm1-201ENSMUST00000030185 ScxQ64124 207 aa7.31□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Ube2aQ9Z255 152 aa7.31□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Tmem243B2RVB9 118 aa7.31□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Krtap14O08640 167 aa7.31□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Igkv2-109A0A075B5K6 120 aa7.29□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Igkv3-7A0A0G2JE31 119 aa7.29□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Fam240bJ3QMB3 78 aa7.29□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Gm10139O88245 57 aa7.29□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Gm10642Q3TWM1 71 aa7.29□□□□□ -1.24
Tpm1-201ENSMUST00000030185 D130052B06RikQ3UW13 202 aa7.28□□□□□ -1.24
Tpm1-201ENSMUST00000030185 HrnrQ8VHD8 2496 aa7.28□□□□□ -1.24
Tpm1-201ENSMUST00000030185 SacsQ9JLC8 4582 aa7.28□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Defb37Q7TMD2 62 aa7.28□□□□□ -1.24
Tpm1-201ENSMUST00000030185 Igkv1-110A0A0B4J1I0 119 aa7.27□□□□□ -1.25
Tpm1-201ENSMUST00000030185 9530003J23RikQ8BM26 151 aa7.26□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Ryr1E9PZQ0 5035 aa7.26□□□□□ -1.25
Tpm1-201ENSMUST00000030185 2210017I01RikA0A0A6YVV1 95 aa7.25□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Vpreb3D3Z6J4 130 aa7.25□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Gm7102J3QQ10 178 aa7.25□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Igkv8-26A0A075B5N5 123 aa7.25□□□□□ -1.25
Tpm1-201ENSMUST00000030185 A0A286YE02 88 aa7.24□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Vpreb2P13373 142 aa7.24□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Defb39Q70KL3 74 aa7.24□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Hectd4E9Q2E4 4418 aa7.24□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Gm20726G3UX18 150 aa7.23□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Defa28D3Z1V9 94 aa7.23□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Vpreb1P13372 142 aa7.23□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Xcl1P47993 114 aa7.23□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Ighv10-3A0A075B5T6 119 aa7.22□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Lamtor3O88653 124 aa7.22□□□□□ -1.25
Tpm1-201ENSMUST00000030185 A830005F24RikQ8BRT5 167 aa7.22□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Gm37389A0A0A6YW05 95 aa7.21□□□□□ -1.25
Tpm1-201ENSMUST00000030185 A0A1Y7VLE6 161 aa7.21□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Znf706Q9D115 76 aaKnown RBP7.21□□□□□ -1.25
Tpm1-201ENSMUST00000030185 Igkv3-5A0A140T8M6 119 aa7.2□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Gm10401E9Q3K6 71 aa7.2□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Odf3bQ5M8M2 238 aa7.2□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Rpl37aP61514 92 aa7.2□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Trav3-1Q5R1I8 114 aa7.2□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Lrp1bQ9JI18 4599 aa7.2□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Sfta2E9PXB6 77 aa7.19□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Wfdc13Q5DQQ6 81 aa7.18□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Krtap3-2Q9D638 99 aa7.18□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Krtap3-3Q9D7P0 99 aa7.18□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Lyrm7Q9DA03 104 aa7.18□□□□□ -1.26
Tpm1-201ENSMUST00000030185 BatfO35284 125 aa7.17□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Igkv8-27A0A0G2JF28 120 aa7.16□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Igkv8-30A0A140T8M3 121 aa7.16□□□□□ -1.26
Tpm1-201ENSMUST00000030185 P06320 134 aa7.16□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Cox6a2P43023 97 aa7.16□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Trav14d-3-dv8A0A075B619 120 aa7.15□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Vps13bQ80TY5 3993 aa7.15□□□□□ -1.26
Tpm1-201ENSMUST00000030185 Gm12353A2AGJ4 60 aa7.15□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Pde6gP09174 87 aa7.15□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Pkhd1l1Q80ZA4 4249 aa7.14□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Kmt2cQ8BRH4 4903 aa7.14□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Mrpl55Q9CZ83 127 aa7.14□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Rbm3O89086 153 aaKnown RBP7.13□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Inafm2A0A1L1STD6 152 aa7.13□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Chchd10Q7TNL9 138 aa7.13□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Krtap28-13A0A087WQP5 138 aa7.12□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Cypt14J3QPF7 87 aa7.12□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Dnah8Q91XQ0 4731 aa7.11□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Sprr2jO70561 109 aa7.11□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Igf1P05017 153 aa7.11□□□□□ -1.27
Tpm1-201ENSMUST00000030185 A730071L15RikQ8C4X0 137 aa7.11□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Fat2Q5F226 4351 aa7.11□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Igkv8-28A0A0G2JE47 121 aa7.1□□□□□ -1.27
Tpm1-201ENSMUST00000030185 RetnlbQ99P86 105 aa7.09□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Gm10308Q9CVR5 141 aa7.09□□□□□ -1.27
Tpm1-201ENSMUST00000030185 Gm28539A0A087WSL9 92 aa7.08□□□□□ -1.28
Tpm1-201ENSMUST00000030185 Q8BT88 171 aa7.08□□□□□ -1.28
Tpm1-201ENSMUST00000030185 Ormdl1Q921I0 153 aa7.08□□□□□ -1.28
Tpm1-201ENSMUST00000030185 Anapc11Q9CPX9 84 aa7.07□□□□□ -1.28
Tpm1-201ENSMUST00000030185 1700018G05RikA0A1B0GSI2 66 aa7.06□□□□□ -1.28
Tpm1-201ENSMUST00000030185 Gm9821Q8K076 103 aa7.05□□□□□ -1.28
Tpm1-201ENSMUST00000030185 Smim20D3Z7Q2 69 aa7.04□□□□□ -1.28
Tpm1-201ENSMUST00000030185 Krtap19-5O08632 62 aa7.04□□□□□ -1.28
Tpm1-201ENSMUST00000030185 Gm28230A0A0A0MQ91 144 aa7.03□□□□□ -1.28
Tpm1-201ENSMUST00000030185 Samd13D3YUG0 102 aa7.02□□□□□ -1.29
Tpm1-201ENSMUST00000030185 Defa25Q5G864 92 aa7.02□□□□□ -1.29
Tpm1-201ENSMUST00000030185 Igkv3-10A0A0G2JGN0 119 aa7.01□□□□□ -1.29
Tpm1-201ENSMUST00000030185 4930535I16RikQ9CUI2 172 aa7.01□□□□□ -1.29
Tpm1-201ENSMUST00000030185 Ubl5Q9EPV8 73 aa7.01□□□□□ -1.29
Tpm1-201ENSMUST00000030185 Igkv3-4A0A140T8Q4 119 aa7□□□□□ -1.29
Tpm1-201ENSMUST00000030185 Defb12Q8K4N3 78 aa7□□□□□ -1.29
Tpm1-201ENSMUST00000030185 Igkv8-21A0A140T8P7 120 aa7□□□□□ -1.29
Tpm1-201ENSMUST00000030185 Gm10337F7DEP7 55 aa6.99□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 60.4 ms