RNA–Protein interactions for RNA: ENSMUST00000030185.4

Tpm1-201, Transcript of Tropomyosin alpha-1 chain, mousemouse

APPRIS ALT1 TSL 2 BASIC

Gene Tpm1, Length 1,797 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-201ENSMUST00000030185 Gm35339A0A140LHH9 1649 aa25.72■■□□□ 1.71
Tpm1-201ENSMUST00000030185 NischQ80TM9 1593 aa25.52■■□□□ 1.68
Tpm1-201ENSMUST00000030185 Abcc9P70170 1546 aa24.77■■□□□ 1.56
Tpm1-201ENSMUST00000030185 Abcc8B2RUS7 1588 aa24.5■■□□□ 1.51
Tpm1-201ENSMUST00000030185 ScribQ80U72 1612 aa23.31■■□□□ 1.32
Tpm1-201ENSMUST00000030185 Dcaf1Q80TR8 1506 aa22.81■■□□□ 1.24
Tpm1-201ENSMUST00000030185 NacadQ5SWP3 1504 aa22.65■■□□□ 1.22
Tpm1-201ENSMUST00000030185 Kdm5dQ62240 1548 aa22.65■■□□□ 1.22
Tpm1-201ENSMUST00000030185 Rhox8Q6VSS7 320 aa22.45■■□□□ 1.19
Tpm1-201ENSMUST00000030185 Rb1cc1Q9ESK9 1588 aa22.29■■□□□ 1.16
Tpm1-201ENSMUST00000030185 Ccdc180J3QNE4 1664 aa22.26■■□□□ 1.15
Tpm1-201ENSMUST00000030185 Sycp2Q9CUU3 1500 aa22.17■■□□□ 1.14
Tpm1-201ENSMUST00000030185 Baz1aO88379 1555 aa22.04■■□□□ 1.12
Tpm1-201ENSMUST00000030185 Crybg2B7ZCC2 1516 aa21.93■■□□□ 1.1
Tpm1-201ENSMUST00000030185 BicraF8VPZ9 1578 aa21.77■■□□□ 1.08
Tpm1-201ENSMUST00000030185 Rtl1Q7M732 1744 aa21.73■■□□□ 1.07
Tpm1-201ENSMUST00000030185 Zcchc6Q5BLK4 1491 aaKnown RBP21.52■■□□□ 1.04
Tpm1-201ENSMUST00000030185 Smarca2Q6DIC0 1577 aa21.46■■□□□ 1.03
Tpm1-201ENSMUST00000030185 Cecr2E9Q2Z1 1453 aa21.06■□□□□ 0.96
Tpm1-201ENSMUST00000030185 Pds5bQ4VA53 1446 aaKnown RBP21.05■□□□□ 0.96
Tpm1-201ENSMUST00000030185 Smarca4Q3TKT4 1613 aaKnown RBP21.03■□□□□ 0.96
Tpm1-201ENSMUST00000030185 Atad2bE9Q166 1460 aaKnown RBP20.96■□□□□ 0.95
Tpm1-201ENSMUST00000030185 Ccdc136Q3TVA9 1136 aa20.91■□□□□ 0.94
Tpm1-201ENSMUST00000030185 Brd4Q9ESU6 1400 aaKnown RBP20.86■□□□□ 0.93
Tpm1-201ENSMUST00000030185 Iqgap2Q3UQ44 1575 aa20.82■□□□□ 0.92
Tpm1-201ENSMUST00000030185 Cttnbp2B9EJA2 1648 aa20.77■□□□□ 0.92
Tpm1-201ENSMUST00000030185 Synj1Q8CHC4 1574 aa20.74■□□□□ 0.91
Tpm1-201ENSMUST00000030185 CftrP26361 1476 aa20.73■□□□□ 0.91
Tpm1-201ENSMUST00000030185 Trim41Q5NCC3 630 aa20.73■□□□□ 0.91
Tpm1-201ENSMUST00000030185 Thoc2B1AZI6 1594 aaKnown RBP20.68■□□□□ 0.9
Tpm1-201ENSMUST00000030185 Ercc6F8VPZ5 1481 aa20.61■□□□□ 0.89
Tpm1-201ENSMUST00000030185 Wdr62Q3U3T8 1523 aa20.56■□□□□ 0.88
Tpm1-201ENSMUST00000030185 Frmpd1A2AKB4 1549 aa20.51■□□□□ 0.87
Tpm1-201ENSMUST00000030185 Unc13aQ4KUS2 1712 aa20.36■□□□□ 0.85
Tpm1-201ENSMUST00000030185 Cc2d2aQ8CFW7 1633 aa20.35■□□□□ 0.85
Tpm1-201ENSMUST00000030185 Esf1Q3V1V3 845 aaKnown RBP20.33■□□□□ 0.84
Tpm1-201ENSMUST00000030185 Fam135aQ6NS59 1506 aa20.32■□□□□ 0.84
Tpm1-201ENSMUST00000030185 Golga3P55937 1487 aa20.3■□□□□ 0.84
Tpm1-201ENSMUST00000030185 Top2bQ64511 1612 aa20.28■□□□□ 0.84
Tpm1-201ENSMUST00000030185 Phldb1Q6PDH0 1371 aaKnown RBP20.27■□□□□ 0.84
Tpm1-201ENSMUST00000030185 Baz1bQ9Z277 1479 aa20.2■□□□□ 0.82
Tpm1-201ENSMUST00000030185 Dnajc5bQ9CQ94 199 aa20.19■□□□□ 0.82
Tpm1-201ENSMUST00000030185 Cngb1E1AZ71 1325 aa20.1■□□□□ 0.81
Tpm1-201ENSMUST00000030185 HrcG5E8J6 738 aa20.06■□□□□ 0.8
Tpm1-201ENSMUST00000030185 Lamc3Q9R0B6 1581 aa20.04■□□□□ 0.8
Tpm1-201ENSMUST00000030185 Rsf1E9PWW9 1441 aaKnown RBP20.03■□□□□ 0.8
Tpm1-201ENSMUST00000030185 TnnQ80Z71 1560 aa20■□□□□ 0.79
Tpm1-201ENSMUST00000030185 Fmn1Q05860 1466 aa19.99■□□□□ 0.79
Tpm1-201ENSMUST00000030185 Ubl4bQ9CQ84 188 aa19.99■□□□□ 0.79
Tpm1-201ENSMUST00000030185 Kif15Q6P9L6 1387 aa19.92■□□□□ 0.78
Tpm1-201ENSMUST00000030185 Ccdc88bQ4QRL3 1481 aa19.86■□□□□ 0.77
Tpm1-201ENSMUST00000030185 Mrc2Q64449 1479 aa19.83■□□□□ 0.76
Tpm1-201ENSMUST00000030185 Cux2P70298 1426 aa19.79■□□□□ 0.76
Tpm1-201ENSMUST00000030185 Cep164Q5DU05 1446 aa19.78■□□□□ 0.76
Tpm1-201ENSMUST00000030185 Chic1Q8CBW7 227 aa19.74■□□□□ 0.75
Tpm1-201ENSMUST00000030185 Camsap1A2AHC3 1581 aa19.74■□□□□ 0.75
Tpm1-201ENSMUST00000030185 Top2aQ01320 1528 aaKnown RBP19.73■□□□□ 0.75
Tpm1-201ENSMUST00000030185 Ccdc18Q640L5 1455 aa19.72■□□□□ 0.75
Tpm1-201ENSMUST00000030185 Npm1Q61937 292 aaKnown RBP19.61■□□□□ 0.73
Tpm1-201ENSMUST00000030185 Kif21aQ9QXL2 1672 aa19.57■□□□□ 0.72
Tpm1-201ENSMUST00000030185 Il27Q8K3I6 234 aa19.51■□□□□ 0.71
Tpm1-201ENSMUST00000030185 LrpprcQ6PB66 1392 aaKnown RBP19.5■□□□□ 0.71
Tpm1-201ENSMUST00000030185 Grin2bQ01097 1482 aa19.5■□□□□ 0.71
Tpm1-201ENSMUST00000030185 NrkQ9R0G8 1455 aa19.46■□□□□ 0.71
Tpm1-201ENSMUST00000030185 PogzQ8BZH4 1409 aaKnown RBP19.44■□□□□ 0.7
Tpm1-201ENSMUST00000030185 Dhx29Q6PGC1 1365 aaKnown RBP19.41■□□□□ 0.7
Tpm1-201ENSMUST00000030185 Crocc2F6XLV1 1638 aa19.4■□□□□ 0.7
Tpm1-201ENSMUST00000030185 Lrriq1Q0P5X1 1673 aa19.38■□□□□ 0.69
Tpm1-201ENSMUST00000030185 Shroom4Q1W617 1475 aa19.37■□□□□ 0.69
Tpm1-201ENSMUST00000030185 Efcab5A0JP43 1406 aa19.36■□□□□ 0.69
Tpm1-201ENSMUST00000030185 Duox2A2AQ99 1517 aa19.36■□□□□ 0.69
Tpm1-201ENSMUST00000030185 Rapgef2Q8CHG7 1496 aa19.34■□□□□ 0.69
Tpm1-201ENSMUST00000030185 Gab3Q8BSM5 595 aa19.3■□□□□ 0.68
Tpm1-201ENSMUST00000030185 PtprkP35822 1457 aa19.3■□□□□ 0.68
Tpm1-201ENSMUST00000030185 Urb2E9Q7L1 1524 aaKnown RBP19.25■□□□□ 0.67
Tpm1-201ENSMUST00000030185 Samd9lQ69Z37 1561 aa19.23■□□□□ 0.67
Tpm1-201ENSMUST00000030185 Plb1Q3TTY0 1478 aa19.23■□□□□ 0.67
Tpm1-201ENSMUST00000030185 Eif4g1Q6NZJ6 1600 aaKnown RBP19.22■□□□□ 0.67
Tpm1-201ENSMUST00000030185 Npm2Q80W85 207 aa19.19■□□□□ 0.66
Tpm1-201ENSMUST00000030185 Cep162Q6ZQ06 1403 aa19.17■□□□□ 0.66
Tpm1-201ENSMUST00000030185 Ift140E9PY46 1464 aa19.16■□□□□ 0.66
Tpm1-201ENSMUST00000030185 Mroh2bQ7M6Y6 1581 aa19.15■□□□□ 0.66
Tpm1-201ENSMUST00000030185 Pbrm1Q8BSQ9 1634 aaKnown RBP19.14■□□□□ 0.65
Tpm1-201ENSMUST00000030185 Map3k1P53349 1493 aa19.14■□□□□ 0.65
Tpm1-201ENSMUST00000030185 Setd1bQ8CFT2 1985 aa19.12■□□□□ 0.65
Tpm1-201ENSMUST00000030185 SynmQ70IV5 1561 aa19.12■□□□□ 0.65
Tpm1-201ENSMUST00000030185 Eif4g3Q80XI3 1579 aaKnown RBP19.12■□□□□ 0.65
Tpm1-201ENSMUST00000030185 Arhgap35Q91YM2 1499 aa19.12■□□□□ 0.65
Tpm1-201ENSMUST00000030185 Disp1Q3TDN0 1521 aa19.07■□□□□ 0.64
Tpm1-201ENSMUST00000030185 Gpatch8A2A6A1 1505 aa19.04■□□□□ 0.64
Tpm1-201ENSMUST00000030185 AqrQ8CFQ3 1481 aaKnown RBP19.04■□□□□ 0.64
Tpm1-201ENSMUST00000030185 Rad54l2Q99NG0 1466 aa19.03■□□□□ 0.64
Tpm1-201ENSMUST00000030185 Magi3Q9EQJ9 1476 aa19.02■□□□□ 0.64
Tpm1-201ENSMUST00000030185 Zeb1Q64318 1117 aa19.01■□□□□ 0.63
Tpm1-201ENSMUST00000030185 Grin2aP35436 1464 aa19■□□□□ 0.63
Tpm1-201ENSMUST00000030185 Nup160Q9Z0W3 1402 aaKnown RBP19■□□□□ 0.63
Tpm1-201ENSMUST00000030185 Ube2uB1AUC4 352 aa18.98■□□□□ 0.63
Tpm1-201ENSMUST00000030185 Rusc2Q80U22 1514 aa18.97■□□□□ 0.63
Tpm1-201ENSMUST00000030185 Carmil1Q6EDY6 1374 aa18.96■□□□□ 0.63
Tpm1-201ENSMUST00000030185 Pla2r1Q62028 1487 aa18.96■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 83.8 ms