RNA–Protein interactions for RNA: ENSMUST00000117269.7

Traf3-203, Transcript of TNF receptor-associated factor 3, mousemouse

TSL 1 (best) BASIC

Gene Traf3, Length 6,972 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-203ENSMUST00000117269 Ptpn13Q64512 2453 aa12.5□□□□□ -0.41
Traf3-203ENSMUST00000117269 Gm10308Q9CVR5 141 aa12.5□□□□□ -0.41
Traf3-203ENSMUST00000117269 Hcfc1Q61191 2045 aaKnown RBP12.5□□□□□ -0.41
Traf3-203ENSMUST00000117269 Coa5Q99M07 74 aa12.5□□□□□ -0.41
Traf3-203ENSMUST00000117269 Krtap11-1E9Q2E9 183 aa12.48□□□□□ -0.41
Traf3-203ENSMUST00000117269 1810062G17RikG3X8Y2 129 aa12.48□□□□□ -0.41
Traf3-203ENSMUST00000117269 SrcapA0A087WQ44 3271 aa12.48□□□□□ -0.41
Traf3-203ENSMUST00000117269 Psors1c2Q80ZC9 134 aa12.44□□□□□ -0.42
Traf3-203ENSMUST00000117269 Rnase13Q5GAM7 153 aa12.42□□□□□ -0.42
Traf3-203ENSMUST00000117269 Cdc42se1Q8BHL7 80 aa12.42□□□□□ -0.42
Traf3-203ENSMUST00000117269 Zfp462B1AWL2 2495 aaKnown RBP12.42□□□□□ -0.42
Traf3-203ENSMUST00000117269 TrrapQ80YV3 2565 aaKnown RBP12.4□□□□□ -0.43
Traf3-203ENSMUST00000117269 Usp9xP70398 2559 aaKnown RBP12.39□□□□□ -0.43
Traf3-203ENSMUST00000117269 Krtap26-1Q9D7N2 215 aa12.39□□□□□ -0.43
Traf3-203ENSMUST00000117269 Sprr4Q8CGN8 76 aa12.36□□□□□ -0.43
Traf3-203ENSMUST00000117269 Prr13Q9CQJ5 137 aa12.35□□□□□ -0.43
Traf3-203ENSMUST00000117269 Gm20538F6Z9R1 75 aa12.34□□□□□ -0.43
Traf3-203ENSMUST00000117269 PolqQ8CGS6 2544 aa12.32□□□□□ -0.44
Traf3-203ENSMUST00000117269 Eif4ebp3Q80VV3 101 aa12.29□□□□□ -0.44
Traf3-203ENSMUST00000117269 AY074887Q8R5F9 132 aa12.29□□□□□ -0.44
Traf3-203ENSMUST00000117269 Anapc11Q9CPX9 84 aa12.26□□□□□ -0.45
Traf3-203ENSMUST00000117269 Pla2g10Q9QXX3 151 aa12.26□□□□□ -0.45
Traf3-203ENSMUST00000117269 Defb9Q8R2I6 67 aa12.25□□□□□ -0.45
Traf3-203ENSMUST00000117269 SetxA2AKX3 2646 aa12.25□□□□□ -0.45
Traf3-203ENSMUST00000117269 Phxr4P15974 95 aa12.25□□□□□ -0.45
Traf3-203ENSMUST00000117269 Cypt15B1AXS0 87 aa12.25□□□□□ -0.45
Traf3-203ENSMUST00000117269 A330070K13RikQ8CA53 115 aa12.23□□□□□ -0.45
Traf3-203ENSMUST00000117269 Uqcr11Q9CPX8 56 aa12.21□□□□□ -0.45
Traf3-203ENSMUST00000117269 Sprr1bQ62267 153 aa12.21□□□□□ -0.45
Traf3-203ENSMUST00000117269 Setd2E9Q5F9 2537 aa12.2□□□□□ -0.46
Traf3-203ENSMUST00000117269 Plac8Q9JI48 112 aa12.18□□□□□ -0.46
Traf3-203ENSMUST00000117269 Bahcc1Q3UHR0 2643 aa12.17□□□□□ -0.46
Traf3-203ENSMUST00000117269 C530025M09RikF6RGA8 229 aa12.16□□□□□ -0.46
Traf3-203ENSMUST00000117269 Gm3233E9Q2H5 230 aa12.13□□□□□ -0.47
Traf3-203ENSMUST00000117269 MtorQ9JLN9 2549 aa12.13□□□□□ -0.47
Traf3-203ENSMUST00000117269 Gm7276Q3TYW4 209 aa12.12□□□□□ -0.47
Traf3-203ENSMUST00000117269 Lypd5Q9D7Z7 256 aa12.11□□□□□ -0.47
Traf3-203ENSMUST00000117269 Cep192E9Q4Y4 2514 aaKnown RBP12.09□□□□□ -0.47
Traf3-203ENSMUST00000117269 AW011738F6S7Q2 159 aa12.09□□□□□ -0.47
Traf3-203ENSMUST00000117269 Gm26620Q9CY65 116 aa12.06□□□□□ -0.48
Traf3-203ENSMUST00000117269 Epg5Q80TA9 2572 aa12.05□□□□□ -0.48
Traf3-203ENSMUST00000117269 Chtf8P0CG14 533 aa12.04□□□□□ -0.48
Traf3-203ENSMUST00000117269 CriptO70333 101 aa12.04□□□□□ -0.48
Traf3-203ENSMUST00000117269 OxtP35454 125 aa12.04□□□□□ -0.48
Traf3-203ENSMUST00000117269 Gm11213A0A1B0GR83 88 aa12□□□□□ -0.49
Traf3-203ENSMUST00000117269 Gm21798J3QNU5 87 aa11.99□□□□□ -0.49
Traf3-203ENSMUST00000117269 2310034C09RikQ9D746 214 aa11.99□□□□□ -0.49
Traf3-203ENSMUST00000117269 Gm10643Q3URG9 111 aa11.96□□□□□ -0.49
Traf3-203ENSMUST00000117269 Fam104aA2A6P4 185 aa11.95□□□□□ -0.5
Traf3-203ENSMUST00000117269 Fam229bQ8CF36 80 aa11.94□□□□□ -0.5
Traf3-203ENSMUST00000117269 CnbpP53996 178 aaKnown RBP11.91□□□□□ -0.5
Traf3-203ENSMUST00000117269 Gm3880A0A1B0GSB3 72 aa11.9□□□□□ -0.5
Traf3-203ENSMUST00000117269 Gm9821Q8K076 103 aa11.9□□□□□ -0.5
Traf3-203ENSMUST00000117269 Abca12E9Q876 2595 aa11.9□□□□□ -0.5
Traf3-203ENSMUST00000117269 Unc79Q0KK59 2596 aa11.89□□□□□ -0.51
Traf3-203ENSMUST00000117269 Spink7Q6IE32 76 aa11.89□□□□□ -0.51
Traf3-203ENSMUST00000117269 CicQ924A2 2510 aa11.88□□□□□ -0.51
Traf3-203ENSMUST00000117269 Zcchc13Q9D548 170 aa11.88□□□□□ -0.51
Traf3-203ENSMUST00000117269 Gm7138L7N2C3 230 aa11.87□□□□□ -0.51
Traf3-203ENSMUST00000117269 Gm3238W4VSP7 230 aa11.87□□□□□ -0.51
Traf3-203ENSMUST00000117269 Usp9yF8VPU6 2556 aa11.86□□□□□ -0.51
Traf3-203ENSMUST00000117269 Smim29Q8R043 75 aa11.85□□□□□ -0.51
Traf3-203ENSMUST00000117269 Cypt14J3QPF7 87 aa11.81□□□□□ -0.52
Traf3-203ENSMUST00000117269 Gm9955Q8CEJ8 102 aa11.8□□□□□ -0.52
Traf3-203ENSMUST00000117269 6030445D17RikE9Q8F9 148 aa11.78□□□□□ -0.52
Traf3-203ENSMUST00000117269 Gm7137J3QMW1 236 aa11.76□□□□□ -0.53
Traf3-203ENSMUST00000117269 Gm4491E0CX42 125 aa11.75□□□□□ -0.53
Traf3-203ENSMUST00000117269 Nbeal1E9PYP2 2688 aa11.75□□□□□ -0.53
Traf3-203ENSMUST00000117269 NbdyA0A0N4SUI7 68 aa11.74□□□□□ -0.53
Traf3-203ENSMUST00000117269 Myo18bE9PV66 2605 aa11.74□□□□□ -0.53
Traf3-203ENSMUST00000117269 Ankrd17Q99NH0 2603 aaKnown RBP11.73□□□□□ -0.53
Traf3-203ENSMUST00000117269 FlnbQ80X90 2602 aaKnown RBP11.61□□□□□ -0.55
Traf3-203ENSMUST00000117269 Ankrd11E9Q4F7 2643 aa11.61□□□□□ -0.55
Traf3-203ENSMUST00000117269 Gm10065F6TJM2 114 aa11.61□□□□□ -0.55
Traf3-203ENSMUST00000117269 Zfp292Q9Z2U2 2698 aa11.61□□□□□ -0.55
Traf3-203ENSMUST00000117269 Krtap15-1Q9QZU5 150 aa11.6□□□□□ -0.55
Traf3-203ENSMUST00000117269 Lelp1Q9DAE3 120 aa11.57□□□□□ -0.56
Traf3-203ENSMUST00000117269 Gm10320E9PW43 113 aa11.56□□□□□ -0.56
Traf3-203ENSMUST00000117269 Gm9508A0A1W2P7W0 230 aa11.54□□□□□ -0.56
Traf3-203ENSMUST00000117269 Nsd1O88491 2588 aaKnown RBP11.54□□□□□ -0.56
Traf3-203ENSMUST00000117269 FasnP19096 2504 aaKnown RBP11.5□□□□□ -0.57
Traf3-203ENSMUST00000117269 Dmbt1Q60997 2085 aa11.5□□□□□ -0.57
Traf3-203ENSMUST00000117269 Camk2n1Q6QWF9 78 aa11.48□□□□□ -0.57
Traf3-203ENSMUST00000117269 Golgb1E9PVZ8 3238 aa11.46□□□□□ -0.57
Traf3-203ENSMUST00000117269 Odf3bQ5M8M2 238 aa11.46□□□□□ -0.58
Traf3-203ENSMUST00000117269 Usp24B1AY13 2617 aaKnown RBP11.45□□□□□ -0.58
Traf3-203ENSMUST00000117269 AtrQ9JKK8 2635 aa11.44□□□□□ -0.58
Traf3-203ENSMUST00000117269 Gm10139O88245 57 aa11.43□□□□□ -0.58
Traf3-203ENSMUST00000117269 Gm42715A0A087WP63 3095 aaKnown RBP11.41□□□□□ -0.58
Traf3-203ENSMUST00000117269 Fam229aB2KGE5 128 aa11.38□□□□□ -0.59
Traf3-203ENSMUST00000117269 Gm17349F7BGH6 99 aa11.34□□□□□ -0.59
Traf3-203ENSMUST00000117269 Cystm1Q8K353 104 aa11.33□□□□□ -0.6
Traf3-203ENSMUST00000117269 Gm37013Q8K491 104 aa11.33□□□□□ -0.6
Traf3-203ENSMUST00000117269 HrnrQ8VHD8 2496 aa11.28□□□□□ -0.6
Traf3-203ENSMUST00000117269 Sprr1aQ62266 144 aa11.28□□□□□ -0.6
Traf3-203ENSMUST00000117269 CenpfE9Q3P4 2997 aaKnown RBP11.25□□□□□ -0.61
Traf3-203ENSMUST00000117269 Gm36176A0A1W2P8D5 158 aa11.25□□□□□ -0.61
Traf3-203ENSMUST00000117269 PcntP48725 2898 aa11.24□□□□□ -0.61
Traf3-203ENSMUST00000117269 Fn1P11276 2477 aaKnown RBP11.23□□□□□ -0.61
Traf3-203ENSMUST00000117269 Gm16253D3Z167 63 aa11.21□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms