RNA–Protein interactions for RNA: ENSMUST00000117269.7

Traf3-203, Transcript of TNF receptor-associated factor 3, mousemouse

TSL 1 (best) BASIC

Gene Traf3, Length 6,972 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-203ENSMUST00000117269 Rhox8Q6VSS7 320 aa32.99■■■□□ 2.87
Traf3-203ENSMUST00000117269 Ehmt2Q9Z148 1263 aaKnown RBP29.99■■■□□ 2.39
Traf3-203ENSMUST00000117269 Rpgrip1Q9EPQ2 1331 aa29.86■■■□□ 2.37
Traf3-203ENSMUST00000117269 Cngb1E1AZ71 1325 aa29.35■■■□□ 2.29
Traf3-203ENSMUST00000117269 Wdr66E9Q743 1299 aa29.32■■■□□ 2.28
Traf3-203ENSMUST00000117269 Ube2uB1AUC4 352 aa29.18■■■□□ 2.26
Traf3-203ENSMUST00000117269 Las1lA2BE28 776 aaKnown RBP29.15■■■□□ 2.26
Traf3-203ENSMUST00000117269 Esf1Q3V1V3 845 aaKnown RBP29.11■■■□□ 2.25
Traf3-203ENSMUST00000117269 Ccdc136Q3TVA9 1136 aa29.1■■■□□ 2.25
Traf3-203ENSMUST00000117269 Pelp1Q9DBD5 1123 aaKnown RBP28.91■■■□□ 2.22
Traf3-203ENSMUST00000117269 Zeb1Q64318 1117 aa28.88■■■□□ 2.21
Traf3-203ENSMUST00000117269 Gab3Q8BSM5 595 aa28.79■■■□□ 2.2
Traf3-203ENSMUST00000117269 Npm2Q80W85 207 aa28.61■■■□□ 2.17
Traf3-203ENSMUST00000117269 Myt1lP97500 1187 aa28.42■■■□□ 2.14
Traf3-203ENSMUST00000117269 Trim41Q5NCC3 630 aa28.23■■■□□ 2.11
Traf3-203ENSMUST00000117269 Amer1Q7TS75 1132 aa28.12■■■□□ 2.09
Traf3-203ENSMUST00000117269 Slc24a1Q91WD8 1130 aa27.84■■■□□ 2.05
Traf3-203ENSMUST00000117269 CenpbP27790 599 aa27.8■■■□□ 2.04
Traf3-203ENSMUST00000117269 UbtfP25976 765 aaKnown RBP27.78■■■□□ 2.04
Traf3-203ENSMUST00000117269 Stra8P70278 393 aa27.55■■■□□ 2
Traf3-203ENSMUST00000117269 NefmP08553 848 aa27.49■■□□□ 1.99
Traf3-203ENSMUST00000117269 Acin1Q9JIX8 1338 aaKnown RBP27.47■■□□□ 1.99
Traf3-203ENSMUST00000117269 Il27Q8K3I6 234 aa27.25■■□□□ 1.95
Traf3-203ENSMUST00000117269 NischQ80TM9 1593 aa27.24■■□□□ 1.95
Traf3-203ENSMUST00000117269 Ttbk1Q6PCN3 1308 aa27.23■■□□□ 1.95
Traf3-203ENSMUST00000117269 Neurod1Q60867 357 aa27.06■■□□□ 1.92
Traf3-203ENSMUST00000117269 4930567H17RikQ3V0K5 233 aa27.04■■□□□ 1.92
Traf3-203ENSMUST00000117269 Cdk11bP24788 784 aaKnown RBP27.02■■□□□ 1.92
Traf3-203ENSMUST00000117269 Ap3b1Q9Z1T1 1105 aa26.99■■□□□ 1.91
Traf3-203ENSMUST00000117269 4933416C03RikQ3V063 378 aa26.98■■□□□ 1.91
Traf3-203ENSMUST00000117269 NrdcQ8BHG1 1161 aa26.97■■□□□ 1.91
Traf3-203ENSMUST00000117269 Fam50aQ9WV03 339 aaKnown RBP26.96■■□□□ 1.91
Traf3-203ENSMUST00000117269 Eif5bQ05D44 1216 aaKnown RBP26.9■■□□□ 1.9
Traf3-203ENSMUST00000117269 Os9Q8K2C7 672 aa26.9■■□□□ 1.9
Traf3-203ENSMUST00000117269 Anp32bQ9EST5 272 aaKnown RBP26.89■■□□□ 1.9
Traf3-203ENSMUST00000117269 NclP09405 707 aaKnown RBP26.84■■□□□ 1.89
Traf3-203ENSMUST00000117269 NeflP08551 543 aa26.82■■□□□ 1.88
Traf3-203ENSMUST00000117269 Ppargc1bQ8VHJ7 1014 aa26.8■■□□□ 1.88
Traf3-203ENSMUST00000117269 Nop58Q6DFW4 536 aaKnown RBP26.66■■□□□ 1.86
Traf3-203ENSMUST00000117269 Tnnt3Q9QZ47 272 aa26.63■■□□□ 1.85
Traf3-203ENSMUST00000117269 Pcgf6Q99NA9 353 aa26.6■■□□□ 1.85
Traf3-203ENSMUST00000117269 Ccdc180J3QNE4 1664 aa26.59■■□□□ 1.85
Traf3-203ENSMUST00000117269 HrcG5E8J6 738 aa26.57■■□□□ 1.84
Traf3-203ENSMUST00000117269 TonslQ6NZL6 1363 aa26.35■■□□□ 1.81
Traf3-203ENSMUST00000117269 Zbtb7cQ8VCZ7 619 aa26.35■■□□□ 1.81
Traf3-203ENSMUST00000117269 Zcchc6Q5BLK4 1491 aaKnown RBP26.29■■□□□ 1.8
Traf3-203ENSMUST00000117269 Myt1Q8CFC2 1127 aa26.26■■□□□ 1.79
Traf3-203ENSMUST00000117269 Supt5hO55201 1082 aaKnown RBP26.23■■□□□ 1.79
Traf3-203ENSMUST00000117269 Chic1Q8CBW7 227 aa26.15■■□□□ 1.78
Traf3-203ENSMUST00000117269 Hnrnpul2Q00PI9 745 aaKnown RBP26.09■■□□□ 1.77
Traf3-203ENSMUST00000117269 Rtl1Q7M732 1744 aa26.09■■□□□ 1.77
Traf3-203ENSMUST00000117269 Gm13697A2AK42 830 aa26.07■■□□□ 1.76
Traf3-203ENSMUST00000117269 Lmod2Q3UHZ5 550 aa26.05■■□□□ 1.76
Traf3-203ENSMUST00000117269 Mier1Q5UAK0 511 aa26.03■■□□□ 1.76
Traf3-203ENSMUST00000117269 Zbtb4Q5F293 982 aa26.02■■□□□ 1.76
Traf3-203ENSMUST00000117269 Gm35339A0A140LHH9 1649 aa25.98■■□□□ 1.75
Traf3-203ENSMUST00000117269 Ifnlr1Q8CGK5 535 aa25.98■■□□□ 1.75
Traf3-203ENSMUST00000117269 Abcc9P70170 1546 aa25.97■■□□□ 1.75
Traf3-203ENSMUST00000117269 Rtl5Q5DTT4 599 aa25.92■■□□□ 1.74
Traf3-203ENSMUST00000117269 Atp1b4Q99ME6 356 aa25.87■■□□□ 1.73
Traf3-203ENSMUST00000117269 Prdm10Q3UTQ7 1184 aa25.86■■□□□ 1.73
Traf3-203ENSMUST00000117269 Plekhg3Q4VAC9 1341 aa25.86■■□□□ 1.73
Traf3-203ENSMUST00000117269 Erich6D3Z6S9 713 aa25.85■■□□□ 1.73
Traf3-203ENSMUST00000117269 DaxxO35613 739 aa25.82■■□□□ 1.72
Traf3-203ENSMUST00000117269 Nlrp6Q91WS2 869 aa25.82■■□□□ 1.72
Traf3-203ENSMUST00000117269 Npm1Q61937 292 aaKnown RBP25.81■■□□□ 1.72
Traf3-203ENSMUST00000117269 Polr3glQ8R0C0 218 aa25.8■■□□□ 1.72
Traf3-203ENSMUST00000117269 Mapk8ip2Q9ERE9 830 aa25.74■■□□□ 1.71
Traf3-203ENSMUST00000117269 ArxO35085 564 aa25.69■■□□□ 1.7
Traf3-203ENSMUST00000117269 Anp32aO35381 247 aa25.66■■□□□ 1.7
Traf3-203ENSMUST00000117269 ClspnQ80YR7 1315 aa25.63■■□□□ 1.69
Traf3-203ENSMUST00000117269 Gm13695A2AK44 830 aa25.6■■□□□ 1.69
Traf3-203ENSMUST00000117269 Fkbp15Q6P9Q6 1216 aaKnown RBP25.49■■□□□ 1.67
Traf3-203ENSMUST00000117269 Gm38655A0A286YDK6 273 aa25.48■■□□□ 1.67
Traf3-203ENSMUST00000117269 Csrnp3P59055 597 aa25.48■■□□□ 1.67
Traf3-203ENSMUST00000117269 Plppr3Q7TPB0 716 aa25.48■■□□□ 1.67
Traf3-203ENSMUST00000117269 Eid3Q3V124 375 aa25.47■■□□□ 1.67
Traf3-203ENSMUST00000117269 Rangap1P46061 589 aaKnown RBP25.42■■□□□ 1.66
Traf3-203ENSMUST00000117269 DiexfQ8BTT6 772 aaKnown RBP25.38■■□□□ 1.65
Traf3-203ENSMUST00000117269 Hdac5Q9Z2V6 1113 aa25.24■■□□□ 1.63
Traf3-203ENSMUST00000117269 CatipB9EKE5 520 aa25.16■■□□□ 1.62
Traf3-203ENSMUST00000117269 Rad21Q61550 635 aaKnown RBP25.15■■□□□ 1.62
Traf3-203ENSMUST00000117269 Clip1Q922J3 1391 aa25.13■■□□□ 1.61
Traf3-203ENSMUST00000117269 Ppp4r2Q0VGB7 417 aa25.09■■□□□ 1.61
Traf3-203ENSMUST00000117269 Upf2A2AT37 1269 aaKnown RBP25.09■■□□□ 1.61
Traf3-203ENSMUST00000117269 Sall2Q9QX96 1004 aa25.08■■□□□ 1.6
Traf3-203ENSMUST00000117269 Ythdc1E9Q5K9 736 aaKnown RBP25.03■■□□□ 1.6
Traf3-203ENSMUST00000117269 Calr4Q3TQS0 420 aa25.01■■□□□ 1.59
Traf3-203ENSMUST00000117269 Chic2Q9D9G3 165 aa25■■□□□ 1.59
Traf3-203ENSMUST00000117269 Hsp90aa1P07901 733 aaKnown RBP24.99■■□□□ 1.59
Traf3-203ENSMUST00000117269 Vsig10D3YX43 558 aa24.95■■□□□ 1.58
Traf3-203ENSMUST00000117269 DekQ7TNV0 380 aaKnown RBP24.92■■□□□ 1.58
Traf3-203ENSMUST00000117269 Lmod3E9QA62 571 aa24.91■■□□□ 1.58
Traf3-203ENSMUST00000117269 Anks4bQ8K3X6 423 aa24.9■■□□□ 1.58
Traf3-203ENSMUST00000117269 Ccer2J3QPU5 274 aa24.89■■□□□ 1.57
Traf3-203ENSMUST00000117269 Fgd1P52734 960 aa24.86■■□□□ 1.57
Traf3-203ENSMUST00000117269 Trim26Q99PN3 545 aa24.85■■□□□ 1.57
Traf3-203ENSMUST00000117269 Safb2Q80YR5 991 aaKnown RBP24.84■■□□□ 1.57
Traf3-203ENSMUST00000117269 Mrs2Q5NCE8 434 aa24.83■■□□□ 1.57
Traf3-203ENSMUST00000117269 P3h3Q8CG70 732 aa24.8■■□□□ 1.56
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms