RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Gm11213A0A1B0GR83 88 aa4.34□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Krtap11-1E9Q2E9 183 aa4.34□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Ncor1Q60974 2453 aa4.34□□□□□ -1.71
Scn1a-201ENSMUST00000077489 RetnlbQ99P86 105 aa4.33□□□□□ -1.72
Scn1a-201ENSMUST00000077489 Spaca4Q80ZQ0 127 aa4.32□□□□□ -1.72
Scn1a-201ENSMUST00000077489 1810062G17RikG3X8Y2 129 aa4.32□□□□□ -1.72
Scn1a-201ENSMUST00000077489 Kmt2bO08550 2713 aa4.31□□□□□ -1.72
Scn1a-201ENSMUST00000077489 Fam168bQ80XQ8 194 aa4.31□□□□□ -1.72
Scn1a-201ENSMUST00000077489 Fam104aA2A6P4 185 aa4.29□□□□□ -1.72
Scn1a-201ENSMUST00000077489 Gm5617Q91VN2 117 aa4.29□□□□□ -1.72
Scn1a-201ENSMUST00000077489 Tln1P26039 2541 aaKnown RBP4.29□□□□□ -1.72
Scn1a-201ENSMUST00000077489 Igf2rQ07113 2483 aaKnown RBP4.29□□□□□ -1.72
Scn1a-201ENSMUST00000077489 CnbpP53996 178 aaKnown RBP4.29□□□□□ -1.72
Scn1a-201ENSMUST00000077489 Gm11565A2A4M7 156 aa4.29□□□□□ -1.72
Scn1a-201ENSMUST00000077489 C530025M09RikF6RGA8 229 aa4.27□□□□□ -1.73
Scn1a-201ENSMUST00000077489 UtrnE9Q6R7 3430 aa4.27□□□□□ -1.73
Scn1a-201ENSMUST00000077489 Cypt15B1AXS0 87 aa4.26□□□□□ -1.73
Scn1a-201ENSMUST00000077489 Lypd5Q9D7Z7 256 aa4.26□□□□□ -1.73
Scn1a-201ENSMUST00000077489 Zcchc13Q9D548 170 aa4.26□□□□□ -1.73
Scn1a-201ENSMUST00000077489 Defb1P56386 69 aa4.25□□□□□ -1.73
Scn1a-201ENSMUST00000077489 Gm26620Q9CY65 116 aa4.25□□□□□ -1.73
Scn1a-201ENSMUST00000077489 Pla2g10Q9QXX3 151 aa4.25□□□□□ -1.73
Scn1a-201ENSMUST00000077489 Sec61bQ9CQS8 96 aaKnown RBP4.24□□□□□ -1.73
Scn1a-201ENSMUST00000077489 Cypt14J3QPF7 87 aa4.23□□□□□ -1.73
Scn1a-201ENSMUST00000077489 OxtP35454 125 aa4.23□□□□□ -1.73
Scn1a-201ENSMUST00000077489 A330070K13RikQ8CA53 115 aa4.23□□□□□ -1.73
Scn1a-201ENSMUST00000077489 Defb9Q8R2I6 67 aa4.23□□□□□ -1.73
Scn1a-201ENSMUST00000077489 Golgb1E9PVZ8 3238 aa4.23□□□□□ -1.73
Scn1a-201ENSMUST00000077489 Gm9955Q8CEJ8 102 aa4.21□□□□□ -1.74
Scn1a-201ENSMUST00000077489 Rnase13Q5GAM7 153 aa4.21□□□□□ -1.74
Scn1a-201ENSMUST00000077489 Pkd1l2Q7TN88 2461 aa4.2□□□□□ -1.74
Scn1a-201ENSMUST00000077489 Gm21798J3QNU5 87 aa4.19□□□□□ -1.74
Scn1a-201ENSMUST00000077489 CriptO70333 101 aa4.19□□□□□ -1.74
Scn1a-201ENSMUST00000077489 Usp34Q6ZQ93 3582 aa4.18□□□□□ -1.74
Scn1a-201ENSMUST00000077489 Chtf8P0CG14 533 aa4.18□□□□□ -1.74
Scn1a-201ENSMUST00000077489 NbdyA0A0N4SUI7 68 aa4.17□□□□□ -1.74
Scn1a-201ENSMUST00000077489 Gm10065F6TJM2 114 aa4.16□□□□□ -1.74
Scn1a-201ENSMUST00000077489 Lama2Q60675 3118 aaKnown RBP4.16□□□□□ -1.74
Scn1a-201ENSMUST00000077489 Phxr5P08399 672 aa4.16□□□□□ -1.74
Scn1a-201ENSMUST00000077489 Ankrd17Q99NH0 2603 aaKnown RBP4.15□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Gm9821Q8K076 103 aa4.15□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Gm21887J3QQ04 176 aa4.15□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Plac8Q9JI48 112 aa4.15□□□□□ -1.75
Scn1a-201ENSMUST00000077489 2310034C09RikQ9D746 214 aa4.15□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Lrrk2Q5S006 2527 aa4.14□□□□□ -1.75
Scn1a-201ENSMUST00000077489 1700042G07RikB1AUF7 90 aa4.13□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Sptbn4E9PX29 2561 aa4.12□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Gm10139O88245 57 aa4.11□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Ankhd1E9PUR0 2548 aaKnown RBP4.11□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Nbeal1E9PYP2 2688 aa4.11□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Ttc28Q80XJ3 2450 aa4.11□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Odf3bQ5M8M2 238 aa4.11□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Cep192E9Q4Y4 2514 aaKnown RBP4.11□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Fam229bQ8CF36 80 aa4.11□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Gm4491E0CX42 125 aa4.1□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Setd2E9Q5F9 2537 aa4.1□□□□□ -1.75
Scn1a-201ENSMUST00000077489 Gm10320E9PW43 113 aa4.08□□□□□ -1.76
Scn1a-201ENSMUST00000077489 Epg5Q80TA9 2572 aa4.08□□□□□ -1.76
Scn1a-201ENSMUST00000077489 6030445D17RikE9Q8F9 148 aa4.08□□□□□ -1.76
Scn1a-201ENSMUST00000077489 Anapc11Q9CPX9 84 aa4.08□□□□□ -1.76
Scn1a-201ENSMUST00000077489 Piezo1E2JF22 2547 aa4.08□□□□□ -1.76
Scn1a-201ENSMUST00000077489 Zfyve26Q5DU37 2529 aa4.07□□□□□ -1.76
Scn1a-201ENSMUST00000077489 Notch2O35516 2470 aa4.06□□□□□ -1.76
Scn1a-201ENSMUST00000077489 HrnrQ8VHD8 2496 aa4.06□□□□□ -1.76
Scn1a-201ENSMUST00000077489 Sprr1aQ62266 144 aa4.06□□□□□ -1.76
Scn1a-201ENSMUST00000077489 Gm3250E9Q1M3 230 aa4.05□□□□□ -1.76
Scn1a-201ENSMUST00000077489 Gm3880A0A1B0GSB3 72 aa4.05□□□□□ -1.76
Scn1a-201ENSMUST00000077489 SmcpP15265 143 aa4.04□□□□□ -1.76
Scn1a-201ENSMUST00000077489 Ptpn13Q64512 2453 aa4.04□□□□□ -1.76
Scn1a-201ENSMUST00000077489 Abca12E9Q876 2595 aa4.04□□□□□ -1.76
Scn1a-201ENSMUST00000077489 Smim29Q8R043 75 aa4.02□□□□□ -1.77
Scn1a-201ENSMUST00000077489 Chd8Q09XV5 2582 aaKnown RBP4.02□□□□□ -1.77
Scn1a-201ENSMUST00000077489 Gm16253D3Z167 63 aa4.02□□□□□ -1.77
Scn1a-201ENSMUST00000077489 Gm37013Q8K491 104 aa3.99□□□□□ -1.77
Scn1a-201ENSMUST00000077489 Utp20Q5XG71 2788 aaKnown RBP3.99□□□□□ -1.77
Scn1a-201ENSMUST00000077489 MtorQ9JLN9 2549 aa3.98□□□□□ -1.77
Scn1a-201ENSMUST00000077489 Hectd1Q69ZR2 2618 aaKnown RBP3.98□□□□□ -1.77
Scn1a-201ENSMUST00000077489 Spink7Q6IE32 76 aa3.97□□□□□ -1.77
Scn1a-201ENSMUST00000077489 Krtap29-1A2A5X4 342 aa3.97□□□□□ -1.77
Scn1a-201ENSMUST00000077489 Gm3646F6S692 53 aa3.96□□□□□ -1.77
Scn1a-201ENSMUST00000077489 Usp9yF8VPU6 2556 aa3.95□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Camk2n1Q6QWF9 78 aa3.95□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Fam229aB2KGE5 128 aa3.95□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Ankrd11E9Q4F7 2643 aa3.95□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Unc79Q0KK59 2596 aa3.94□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Chd6A3KFM7 2711 aa3.94□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Romo1P60603 79 aa3.94□□□□□ -1.78
Scn1a-201ENSMUST00000077489 A730071L15RikQ8C4X0 137 aa3.93□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Notch1Q01705 2531 aa3.93□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Usp9xP70398 2559 aaKnown RBP3.93□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Cystm1Q8K353 104 aa3.93□□□□□ -1.78
Scn1a-201ENSMUST00000077489 4933415A04RikQ9D443 101 aa3.92□□□□□ -1.78
Scn1a-201ENSMUST00000077489 HttP42859 3119 aa3.92□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Col6a3E9PWQ3 3284 aa3.92□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Myo18bE9PV66 2605 aa3.91□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Rps29P62274 56 aa3.91□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Rpl37Q9D823 97 aa3.91□□□□□ -1.78
Scn1a-201ENSMUST00000077489 SetxA2AKX3 2646 aa3.91□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Gm3233E9Q2H5 230 aa3.9□□□□□ -1.78
Scn1a-201ENSMUST00000077489 Gm5767A0A0J9YTU8 78 aa3.9□□□□□ -1.78
Retrieved 100 of 22,080 RNA–protein pairs in 172.2 ms