RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Rhox8Q6VSS7 320 aa11.31□□□□□ -0.6
Scn1a-201ENSMUST00000077489 Rpgrip1Q9EPQ2 1331 aa10.8□□□□□ -0.68
Scn1a-201ENSMUST00000077489 Cngb1E1AZ71 1325 aa10.35□□□□□ -0.75
Scn1a-201ENSMUST00000077489 Las1lA2BE28 776 aaKnown RBP10.31□□□□□ -0.76
Scn1a-201ENSMUST00000077489 Pelp1Q9DBD5 1123 aaKnown RBP10.19□□□□□ -0.78
Scn1a-201ENSMUST00000077489 NischQ80TM9 1593 aa10.06□□□□□ -0.8
Scn1a-201ENSMUST00000077489 Esf1Q3V1V3 845 aaKnown RBP10.03□□□□□ -0.8
Scn1a-201ENSMUST00000077489 Trim41Q5NCC3 630 aa10.02□□□□□ -0.81
Scn1a-201ENSMUST00000077489 Wdr66E9Q743 1299 aa10□□□□□ -0.81
Scn1a-201ENSMUST00000077489 Ehmt2Q9Z148 1263 aaKnown RBP9.97□□□□□ -0.81
Scn1a-201ENSMUST00000077489 Ccdc136Q3TVA9 1136 aa9.94□□□□□ -0.82
Scn1a-201ENSMUST00000077489 Rtl1Q7M732 1744 aa9.9□□□□□ -0.82
Scn1a-201ENSMUST00000077489 Ccdc180J3QNE4 1664 aa9.88□□□□□ -0.83
Scn1a-201ENSMUST00000077489 Ube2uB1AUC4 352 aa9.87□□□□□ -0.83
Scn1a-201ENSMUST00000077489 Npm2Q80W85 207 aa9.86□□□□□ -0.83
Scn1a-201ENSMUST00000077489 Zeb1Q64318 1117 aa9.84□□□□□ -0.83
Scn1a-201ENSMUST00000077489 NefmP08553 848 aa9.79□□□□□ -0.84
Scn1a-201ENSMUST00000077489 Stra8P70278 393 aa9.78□□□□□ -0.84
Scn1a-201ENSMUST00000077489 Acin1Q9JIX8 1338 aaKnown RBP9.77□□□□□ -0.85
Scn1a-201ENSMUST00000077489 Gab3Q8BSM5 595 aa9.77□□□□□ -0.85
Scn1a-201ENSMUST00000077489 CenpbP27790 599 aa9.73□□□□□ -0.85
Scn1a-201ENSMUST00000077489 Myt1lP97500 1187 aa9.66□□□□□ -0.86
Scn1a-201ENSMUST00000077489 HrcG5E8J6 738 aa9.63□□□□□ -0.87
Scn1a-201ENSMUST00000077489 Amer1Q7TS75 1132 aa9.56□□□□□ -0.88
Scn1a-201ENSMUST00000077489 Myt1Q8CFC2 1127 aa9.54□□□□□ -0.88
Scn1a-201ENSMUST00000077489 UbtfP25976 765 aaKnown RBP9.49□□□□□ -0.89
Scn1a-201ENSMUST00000077489 Tnnt3Q9QZ47 272 aa9.49□□□□□ -0.89
Scn1a-201ENSMUST00000077489 Anp32bQ9EST5 272 aaKnown RBP9.44□□□□□ -0.9
Scn1a-201ENSMUST00000077489 Cdk11bP24788 784 aaKnown RBP9.42□□□□□ -0.9
Scn1a-201ENSMUST00000077489 Abcc9P70170 1546 aa9.4□□□□□ -0.91
Scn1a-201ENSMUST00000077489 NrdcQ8BHG1 1161 aa9.36□□□□□ -0.91
Scn1a-201ENSMUST00000077489 Zcchc6Q5BLK4 1491 aaKnown RBP9.35□□□□□ -0.91
Scn1a-201ENSMUST00000077489 Rtl5Q5DTT4 599 aa9.34□□□□□ -0.91
Scn1a-201ENSMUST00000077489 NeflP08551 543 aa9.33□□□□□ -0.92
Scn1a-201ENSMUST00000077489 4930567H17RikQ3V0K5 233 aa9.33□□□□□ -0.92
Scn1a-201ENSMUST00000077489 Slc24a1Q91WD8 1130 aa9.31□□□□□ -0.92
Scn1a-201ENSMUST00000077489 Nop58Q6DFW4 536 aaKnown RBP9.26□□□□□ -0.93
Scn1a-201ENSMUST00000077489 Il27Q8K3I6 234 aa9.26□□□□□ -0.93
Scn1a-201ENSMUST00000077489 TonslQ6NZL6 1363 aa9.25□□□□□ -0.93
Scn1a-201ENSMUST00000077489 NclP09405 707 aaKnown RBP9.25□□□□□ -0.93
Scn1a-201ENSMUST00000077489 Pcgf6Q99NA9 353 aa9.24□□□□□ -0.93
Scn1a-201ENSMUST00000077489 4933416C03RikQ3V063 378 aa9.22□□□□□ -0.93
Scn1a-201ENSMUST00000077489 Fam50aQ9WV03 339 aaKnown RBP9.22□□□□□ -0.93
Scn1a-201ENSMUST00000077489 Os9Q8K2C7 672 aa9.17□□□□□ -0.94
Scn1a-201ENSMUST00000077489 Ap3b1Q9Z1T1 1105 aa9.17□□□□□ -0.94
Scn1a-201ENSMUST00000077489 DiexfQ8BTT6 772 aaKnown RBP9.15□□□□□ -0.94
Scn1a-201ENSMUST00000077489 Hdac5Q9Z2V6 1113 aa9.15□□□□□ -0.94
Scn1a-201ENSMUST00000077489 Neurod1Q60867 357 aa9.14□□□□□ -0.95
Scn1a-201ENSMUST00000077489 Abcc8B2RUS7 1588 aa9.12□□□□□ -0.95
Scn1a-201ENSMUST00000077489 Eif5bQ05D44 1216 aaKnown RBP9.1□□□□□ -0.95
Scn1a-201ENSMUST00000077489 ClspnQ80YR7 1315 aa9.08□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Mier1Q5UAK0 511 aa9.07□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Brd4Q9ESU6 1400 aaKnown RBP9.06□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Anp32aO35381 247 aa9.05□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Ttbk1Q6PCN3 1308 aa9.05□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Gm35339A0A140LHH9 1649 aa9.04□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Supt5hO55201 1082 aaKnown RBP9.04□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Npm1Q61937 292 aaKnown RBP9.03□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Dcaf1Q80TR8 1506 aa9.03□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Ccer2J3QPU5 274 aa9□□□□□ -0.97
Scn1a-201ENSMUST00000077489 Cep164Q5DU05 1446 aa8.99□□□□□ -0.97
Scn1a-201ENSMUST00000077489 Nlrp6Q91WS2 869 aa8.94□□□□□ -0.98
Scn1a-201ENSMUST00000077489 Rb1cc1Q9ESK9 1588 aa8.91□□□□□ -0.98
Scn1a-201ENSMUST00000077489 Upf2A2AT37 1269 aaKnown RBP8.9□□□□□ -0.98
Scn1a-201ENSMUST00000077489 Clip1Q922J3 1391 aa8.89□□□□□ -0.99
Scn1a-201ENSMUST00000077489 Plekhg3Q4VAC9 1341 aa8.88□□□□□ -0.99
Scn1a-201ENSMUST00000077489 Gm13697A2AK42 830 aa8.88□□□□□ -0.99
Scn1a-201ENSMUST00000077489 Lmod2Q3UHZ5 550 aa8.88□□□□□ -0.99
Scn1a-201ENSMUST00000077489 Hnrnpul2Q00PI9 745 aaKnown RBP8.85□□□□□ -0.99
Scn1a-201ENSMUST00000077489 Ppargc1bQ8VHJ7 1014 aa8.84□□□□□ -0.99
Scn1a-201ENSMUST00000077489 Anks4bQ8K3X6 423 aa8.83□□□□□ -1
Scn1a-201ENSMUST00000077489 DaxxO35613 739 aa8.81□□□□□ -1
Scn1a-201ENSMUST00000077489 Aplp2Q06335 707 aa8.8□□□□□ -1
Scn1a-201ENSMUST00000077489 Clstn2Q9ER65 966 aa8.8□□□□□ -1
Scn1a-201ENSMUST00000077489 Erich6D3Z6S9 713 aa8.79□□□□□ -1
Scn1a-201ENSMUST00000077489 Ccdc9Q8VC31 543 aaKnown RBP8.78□□□□□ -1
Scn1a-201ENSMUST00000077489 Zbtb7cQ8VCZ7 619 aa8.77□□□□□ -1.01
Scn1a-201ENSMUST00000077489 Atp1b4Q99ME6 356 aa8.77□□□□□ -1.01
Scn1a-201ENSMUST00000077489 NacadQ5SWP3 1504 aa8.76□□□□□ -1.01
Scn1a-201ENSMUST00000077489 Gm13695A2AK44 830 aa8.72□□□□□ -1.01
Scn1a-201ENSMUST00000077489 Polr3glQ8R0C0 218 aa8.72□□□□□ -1.01
Scn1a-201ENSMUST00000077489 Calr4Q3TQS0 420 aa8.72□□□□□ -1.01
Scn1a-201ENSMUST00000077489 Baz1aO88379 1555 aa8.72□□□□□ -1.01
Scn1a-201ENSMUST00000077489 Sall2Q9QX96 1004 aa8.68□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Hsp90aa1P07901 733 aaKnown RBP8.67□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Golga3P55937 1487 aa8.67□□□□□ -1.02
Scn1a-201ENSMUST00000077489 BlmO88700 1416 aa8.67□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Chic1Q8CBW7 227 aa8.67□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Ubl4bQ9CQ84 188 aa8.66□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Ercc6F8VPZ5 1481 aa8.66□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Wdr43Q6ZQL4 677 aaKnown RBP8.65□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Ifnlr1Q8CGK5 535 aa8.65□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Rsf1E9PWW9 1441 aaKnown RBP8.64□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Ppp4r2Q0VGB7 417 aa8.64□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Zbtb4Q5F293 982 aa8.64□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Ccdc18Q640L5 1455 aa8.64□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Setd5Q5XJV7 1441 aa8.63□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Eid3Q3V124 375 aa8.63□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Csrnp3P59055 597 aa8.61□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Eea1Q8BL66 1411 aa8.6□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms