RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Igkv8-34A0A0G2JDU0 121 aa12.8□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 9430015G10RikA2ASP7 199 aa12.8□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 Higd2aQ9CQJ1 106 aa12.8□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 NipblQ6KCD5 2798 aaKnown RBP12.78□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 Igkv1-110A0A0B4J1I0 119 aa12.77□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 2310034G01RikA0A286YDL3 209 aa12.77□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 H2al1aQ5M8Q2 105 aa12.77□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 Elof1P60003 83 aa12.77□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Cox7b2Q9D2H1 82 aa12.77□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 PolqQ8CGS6 2544 aa12.76□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Defa20Q45VN2 95 aa12.75□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 A730071L15RikQ8C4X0 137 aa12.75□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Ufsp1Q9CZP0 217 aa12.75□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Fam229bQ8CF36 80 aa12.74□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Notch2O35516 2470 aa12.74□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Tex15F8VPN2 2785 aa12.74□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Stab1Q8R4Y4 2571 aa12.74□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Cdk2ap2Q9CPY4 127 aa12.74□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 A830005F24RikQ8BRT5 167 aa12.73□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Ighv13-2A0A0A6YWN3 119 aa12.73□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Gm17577J3QNF7 156 aa12.72□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Smlr1J3QMJ4 66 aa12.71□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 BikO70337 150 aa12.71□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Fam19a5Q91WE9 132 aa12.71□□□□□ -0.37
Ccdc50-201ENSMUST00000039443 Col6a5A6H584 2640 aa12.7□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 Igsf10Q3V1M1 2594 aa12.7□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 Gm17689B3GLJ4 109 aa12.7□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 Gm7276Q3TYW4 209 aa12.69□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 Fam19a3Q7TPG6 132 aa12.68□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 Serp1Q9Z1W5 66 aa12.67□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 Igkv8-28A0A0G2JE47 121 aa12.66□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 Igkv1-88A0A140T8N1 120 aa12.66□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 Trav14-1A0A0G2JF94 121 aa12.66□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 Nbeal2Q6ZQA0 2742 aa12.66□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 A730009L09RikA0A1B0GS82 72 aa12.65□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 Brk1Q91VR8 75 aa12.65□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 Cd164Q9R0L9 197 aa12.65□□□□□ -0.38
Ccdc50-201ENSMUST00000039443 Snhg11Q4G0K9 87 aa12.64□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 Camk2n2Q78WH7 79 aa12.63□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 Tenm1Q9WTS4 2731 aa12.62□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 Pet100P0DJE0 76 aa12.62□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 Sfta2E9PXB6 77 aa12.61□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 Sprr2jO70561 109 aa12.61□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 A0A286YCN5 57 aa12.6□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 Vpreb2P13373 142 aa12.6□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 Sprr4Q8CGN8 76 aa12.6□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 Gm5617Q91VN2 117 aa12.6□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 Pou2af1Q64693 256 aa12.59□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 Gm36176A0A1W2P8D5 158 aa12.59□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 UqcrqQ9CQ69 82 aa12.59□□□□□ -0.39
Ccdc50-201ENSMUST00000039443 BaalcQ8VHV1 145 aa12.58□□□□□ -0.4
Ccdc50-201ENSMUST00000039443 P06320 134 aa12.57□□□□□ -0.4
Ccdc50-201ENSMUST00000039443 SnurfQ9WU12 71 aa12.57□□□□□ -0.4
Ccdc50-201ENSMUST00000039443 Defb37Q7TMD2 62 aa12.57□□□□□ -0.4
Ccdc50-201ENSMUST00000039443 Vpreb1P13372 142 aa12.56□□□□□ -0.4
Ccdc50-201ENSMUST00000039443 Reg3bP35230 175 aa12.56□□□□□ -0.4
Ccdc50-201ENSMUST00000039443 Hivep3A2A884 2348 aa12.54□□□□□ -0.4
Ccdc50-201ENSMUST00000039443 Brwd1Q921C3 2304 aa12.53□□□□□ -0.4
Ccdc50-201ENSMUST00000039443 Igkv1-122A0A140T8M9 119 aa12.52□□□□□ -0.4
Ccdc50-201ENSMUST00000039443 Defa27F2Z403 93 aa12.51□□□□□ -0.41
Ccdc50-201ENSMUST00000039443 Gm10337F7DEP7 55 aa12.5□□□□□ -0.41
Ccdc50-201ENSMUST00000039443 6430550D23RikE9Q1X6 194 aa12.5□□□□□ -0.41
Ccdc50-201ENSMUST00000039443 Gm10401E9Q3K6 71 aa12.49□□□□□ -0.41
Ccdc50-201ENSMUST00000039443 Phxr5P08399 672 aa12.49□□□□□ -0.41
Ccdc50-201ENSMUST00000039443 A330070K13RikQ8CA53 115 aa12.49□□□□□ -0.41
Ccdc50-201ENSMUST00000039443 Gm11011D3Z3L9 86 aa12.48□□□□□ -0.41
Ccdc50-201ENSMUST00000039443 Cox6a2P43023 97 aa12.48□□□□□ -0.41
Ccdc50-201ENSMUST00000039443 Srrm2Q8BTI8 2703 aaKnown RBP12.46□□□□□ -0.41
Ccdc50-201ENSMUST00000039443 Hspg2Q05793 3707 aaKnown RBP12.45□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Dph3Q8K0W9 82 aa12.45□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Q8BT88 171 aa12.45□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Dmac1Q9CQ00 111 aa12.45□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Mrpl55Q9CZ83 127 aa12.44□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Igkv3-2A0A075B5P0 119 aa12.43□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 ApcQ61315 2845 aa12.43□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 A0A286YE02 88 aa12.43□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Gm10570F6VB42 170 aa12.43□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Prr15lQ8JZM2 100 aa12.43□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Gm7138L7N2C3 230 aa12.42□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Gm3238W4VSP7 230 aa12.42□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Gm37389A0A0A6YW05 95 aa12.4□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Gm11627A6PWP4 55 aa12.4□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 A930002H24RikQ8C8Y3 163 aa12.4□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Gm12353A2AGJ4 60 aa12.4□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 Smim29Q8R043 75 aa12.4□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 AplnQ9R0R4 77 aa12.4□□□□□ -0.42
Ccdc50-201ENSMUST00000039443 PtprqP0C5E4 2300 aa12.39□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 A530084C06RikQ3UTW2 186 aa12.37□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 C130032M10RikQ8C888 123 aa12.37□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 H2al1bA0A087WP11 105 aa12.36□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 H2al1kJ3QP08 105 aa12.36□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 P84750 121 aa12.36□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 H2al1eQ810S6 105 aa12.36□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 Mrpl34Q99N91 92 aa12.36□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 H2al1mQ9DAD9 105 aa12.36□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 FcgbpE9Q0B5 2583 aa12.36□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 Gm7137J3QMW1 236 aa12.36□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 TnxbO35452 4006 aa12.35□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 Gm16181B0V2H2 73 aa12.35□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 Spink8Q09TK9 105 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms