RNA–Protein interactions for RNA: ENSMUST00000021956.8

Ddx41-201, Transcript of Probable ATP-dependent RNA helicase DDX41, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx41, Length 2,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41-201ENSMUST00000021956 Krtap11-1E9Q2E9 183 aa12.1□□□□□ -0.47
Ddx41-201ENSMUST00000021956 Defa27F2Z403 93 aa12.09□□□□□ -0.47
Ddx41-201ENSMUST00000021956 Wnk1P83741 2377 aa12.09□□□□□ -0.47
Ddx41-201ENSMUST00000021956 Elof1P60003 83 aa12.09□□□□□ -0.47
Ddx41-201ENSMUST00000021956 Defa20Q45VN2 95 aa12.09□□□□□ -0.47
Ddx41-201ENSMUST00000021956 BC048502Q80Y74 154 aa12.08□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Fbn1Q61554 2873 aaKnown RBP12.08□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Gm17509Q9CZ61 145 aa12.07□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Leap2Q91V13 76 aa12.07□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Itpr2Q9Z329 2701 aa12.07□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Igkv8-28A0A0G2JE47 121 aa12.06□□□□□ -0.48
Ddx41-201ENSMUST00000021956 H2al1bA0A087WP11 105 aa12.06□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Igkv4-92A0A0B4J1I2 117 aa12.06□□□□□ -0.48
Ddx41-201ENSMUST00000021956 H2al1kJ3QP08 105 aa12.06□□□□□ -0.48
Ddx41-201ENSMUST00000021956 P06320 134 aa12.06□□□□□ -0.48
Ddx41-201ENSMUST00000021956 H2al1eQ810S6 105 aa12.06□□□□□ -0.48
Ddx41-201ENSMUST00000021956 H2al1mQ9DAD9 105 aa12.06□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Gm3250E9Q1M3 230 aa12.05□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Dad1P61804 113 aa12.05□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Xirp2Q4U4S6 3784 aa12.04□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Vpreb2P13373 142 aa12.04□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Gm11213A0A1B0GR83 88 aa12.03□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Gm10401E9Q3K6 71 aa12.02□□□□□ -0.48
Ddx41-201ENSMUST00000021956 Ufsp1Q9CZP0 217 aa12.02□□□□□ -0.48
Ddx41-201ENSMUST00000021956 A530084C06RikQ3UTW2 186 aa12.01□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Igkv3-1A0A075B5P1 119 aa12□□□□□ -0.49
Ddx41-201ENSMUST00000021956 D730001G18RikA0A087WQU7 115 aa12□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Gm17577J3QNF7 156 aa12□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Cdk2ap2Q9CPY4 127 aa11.99□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Cox7b2Q9D2H1 82 aa11.99□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Gm9767G3X930 207 aa11.99□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Gm10570F6VB42 170 aa11.98□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Gm7276Q3TYW4 209 aa11.98□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Ighv8-13A0A075B5Y0 101 aa11.98□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Pou2af1Q64693 256 aa11.98□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Cd164Q9R0L9 197 aa11.98□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Nsd1O88491 2588 aaKnown RBP11.97□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Igkv1-88A0A140T8N1 120 aa11.97□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Sprr2jO70561 109 aa11.97□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Defb37Q7TMD2 62 aa11.96□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Q8BT88 171 aa11.96□□□□□ -0.49
Ddx41-201ENSMUST00000021956 Hivep1Q03172 2688 aa11.96□□□□□ -0.5
Ddx41-201ENSMUST00000021956 Gm11011D3Z3L9 86 aa11.95□□□□□ -0.5
Ddx41-201ENSMUST00000021956 Krtap24-1G3X9A2 248 aa11.95□□□□□ -0.5
Ddx41-201ENSMUST00000021956 Fn1P11276 2477 aaKnown RBP11.93□□□□□ -0.5
Ddx41-201ENSMUST00000021956 Sfta2E9PXB6 77 aa11.92□□□□□ -0.5
Ddx41-201ENSMUST00000021956 A330070K13RikQ8CA53 115 aa11.92□□□□□ -0.5
Ddx41-201ENSMUST00000021956 A730009L09RikA0A1B0GS82 72 aa11.92□□□□□ -0.5
Ddx41-201ENSMUST00000021956 A0A286YCN5 57 aa11.92□□□□□ -0.5
Ddx41-201ENSMUST00000021956 Spink8Q09TK9 105 aa11.92□□□□□ -0.5
Ddx41-201ENSMUST00000021956 CrygfQ9CXV3 174 aa11.91□□□□□ -0.5
Ddx41-201ENSMUST00000021956 Trav14-1A0A0G2JF94 121 aa11.9□□□□□ -0.5
Ddx41-201ENSMUST00000021956 Gm3233E9Q2H5 230 aa11.9□□□□□ -0.51
Ddx41-201ENSMUST00000021956 Prr15lQ8JZM2 100 aa11.88□□□□□ -0.51
Ddx41-201ENSMUST00000021956 Igkv1-122A0A140T8M9 119 aa11.87□□□□□ -0.51
Ddx41-201ENSMUST00000021956 Camk2n2Q78WH7 79 aa11.87□□□□□ -0.51
Ddx41-201ENSMUST00000021956 NipblQ6KCD5 2798 aaKnown RBP11.87□□□□□ -0.51
Ddx41-201ENSMUST00000021956 Igkv3-2A0A075B5P0 119 aa11.86□□□□□ -0.51
Ddx41-201ENSMUST00000021956 Defa28D3Z1V9 94 aa11.86□□□□□ -0.51
Ddx41-201ENSMUST00000021956 Sprr4Q8CGN8 76 aa11.86□□□□□ -0.51
Ddx41-201ENSMUST00000021956 Tex15F8VPN2 2785 aa11.86□□□□□ -0.51
Ddx41-201ENSMUST00000021956 PolqQ8CGS6 2544 aa11.85□□□□□ -0.51
Ddx41-201ENSMUST00000021956 Cox6a2P43023 97 aa11.84□□□□□ -0.51
Ddx41-201ENSMUST00000021956 Snhg11Q4G0K9 87 aa11.84□□□□□ -0.51
Ddx41-201ENSMUST00000021956 6430550D23RikE9Q1X6 194 aa11.84□□□□□ -0.51
Ddx41-201ENSMUST00000021956 Gm37389A0A0A6YW05 95 aa11.83□□□□□ -0.52
Ddx41-201ENSMUST00000021956 Coa6Q8BGD8 79 aa11.8□□□□□ -0.52
Ddx41-201ENSMUST00000021956 Notch2O35516 2470 aa11.8□□□□□ -0.52
Ddx41-201ENSMUST00000021956 A0A286YE02 88 aa11.8□□□□□ -0.52
Ddx41-201ENSMUST00000021956 Cdc42se1Q8BHL7 80 aa11.8□□□□□ -0.52
Ddx41-201ENSMUST00000021956 C130032M10RikQ8C888 123 aa11.8□□□□□ -0.52
Ddx41-201ENSMUST00000021956 Gm5617Q91VN2 117 aa11.8□□□□□ -0.52
Ddx41-201ENSMUST00000021956 Col6a5A6H584 2640 aa11.8□□□□□ -0.52
Ddx41-201ENSMUST00000021956 Bean1Q9EQG5 255 aa11.79□□□□□ -0.52
Ddx41-201ENSMUST00000021956 Stab1Q8R4Y4 2571 aa11.78□□□□□ -0.52
Ddx41-201ENSMUST00000021956 Nbeal2Q6ZQA0 2742 aa11.78□□□□□ -0.52
Ddx41-201ENSMUST00000021956 Spint4Q9D263 159 aa11.77□□□□□ -0.53
Ddx41-201ENSMUST00000021956 A930002H24RikQ8C8Y3 163 aa11.76□□□□□ -0.53
Ddx41-201ENSMUST00000021956 Smim29Q8R043 75 aa11.76□□□□□ -0.53
Ddx41-201ENSMUST00000021956 Mrpl34Q99N91 92 aa11.76□□□□□ -0.53
Ddx41-201ENSMUST00000021956 Tenm1Q9WTS4 2731 aa11.76□□□□□ -0.53
Ddx41-201ENSMUST00000021956 Reg3bP35230 175 aa11.75□□□□□ -0.53
Ddx41-201ENSMUST00000021956 Brwd1Q921C3 2304 aa11.74□□□□□ -0.53
Ddx41-201ENSMUST00000021956 Hspg2Q05793 3707 aaKnown RBP11.74□□□□□ -0.53
Ddx41-201ENSMUST00000021956 Igkv8-19A0A0G2JFN8 121 aa11.73□□□□□ -0.53
Ddx41-201ENSMUST00000021956 Igkv3-4A0A140T8Q4 119 aa11.73□□□□□ -0.53
Ddx41-201ENSMUST00000021956 Gm37013Q8K491 104 aa11.73□□□□□ -0.53
Ddx41-201ENSMUST00000021956 Dmac1Q9CQ00 111 aa11.72□□□□□ -0.53
Ddx41-201ENSMUST00000021956 Hivep3A2A884 2348 aa11.72□□□□□ -0.53
Ddx41-201ENSMUST00000021956 Gm12353A2AGJ4 60 aa11.7□□□□□ -0.54
Ddx41-201ENSMUST00000021956 AI606181Q8C7B9 129 aa11.7□□□□□ -0.54
Ddx41-201ENSMUST00000021956 Gm16181B0V2H2 73 aa11.69□□□□□ -0.54
Ddx41-201ENSMUST00000021956 Gm10197F6QEY5 67 aa11.69□□□□□ -0.54
Ddx41-201ENSMUST00000021956 Igsf10Q3V1M1 2594 aa11.69□□□□□ -0.54
Ddx41-201ENSMUST00000021956 Gm44790A0A0N4SV91 103 aa11.67□□□□□ -0.54
Ddx41-201ENSMUST00000021956 Phxr5P08399 672 aa11.67□□□□□ -0.54
Ddx41-201ENSMUST00000021956 P84750 121 aa11.66□□□□□ -0.54
Ddx41-201ENSMUST00000021956 Gm11627A6PWP4 55 aa11.63□□□□□ -0.55
Ddx41-201ENSMUST00000021956 Vpreb3D3Z6J4 130 aa11.63□□□□□ -0.55
Ddx41-201ENSMUST00000021956 Atox1O08997 68 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms