RNA–Protein interactions for RNA: ENSMUST00000021956.8

Ddx41-201, Transcript of Probable ATP-dependent RNA helicase DDX41, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx41, Length 2,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41-201ENSMUST00000021956 Gm35339A0A140LHH9 1649 aa33.03■■■□□ 2.88
Ddx41-201ENSMUST00000021956 NischQ80TM9 1593 aa32.84■■■□□ 2.85
Ddx41-201ENSMUST00000021956 Abcc9P70170 1546 aa31.91■■■□□ 2.7
Ddx41-201ENSMUST00000021956 Abcc8B2RUS7 1588 aa31.57■■■□□ 2.64
Ddx41-201ENSMUST00000021956 Rtl1Q7M732 1744 aa31.47■■■□□ 2.63
Ddx41-201ENSMUST00000021956 Ccdc180J3QNE4 1664 aa31.02■■■□□ 2.56
Ddx41-201ENSMUST00000021956 Rhox8Q6VSS7 320 aa31.01■■■□□ 2.55
Ddx41-201ENSMUST00000021956 Rpgrip1Q9EPQ2 1331 aa30.83■■■□□ 2.53
Ddx41-201ENSMUST00000021956 ScribQ80U72 1612 aa30.2■■■□□ 2.43
Ddx41-201ENSMUST00000021956 Zcchc6Q5BLK4 1491 aaKnown RBP30.02■■■□□ 2.4
Ddx41-201ENSMUST00000021956 Acin1Q9JIX8 1338 aaKnown RBP29.87■■■□□ 2.37
Ddx41-201ENSMUST00000021956 HrcG5E8J6 738 aa29.49■■■□□ 2.31
Ddx41-201ENSMUST00000021956 Dcaf1Q80TR8 1506 aa29.41■■■□□ 2.3
Ddx41-201ENSMUST00000021956 Kdm5dQ62240 1548 aa29.29■■■□□ 2.28
Ddx41-201ENSMUST00000021956 NacadQ5SWP3 1504 aa29.18■■■□□ 2.26
Ddx41-201ENSMUST00000021956 Pcgf6Q99NA9 353 aa28.99■■■□□ 2.23
Ddx41-201ENSMUST00000021956 Ehmt2Q9Z148 1263 aaKnown RBP28.98■■■□□ 2.23
Ddx41-201ENSMUST00000021956 Rb1cc1Q9ESK9 1588 aa28.77■■■□□ 2.2
Ddx41-201ENSMUST00000021956 Ccdc136Q3TVA9 1136 aa28.65■■■□□ 2.18
Ddx41-201ENSMUST00000021956 Sycp2Q9CUU3 1500 aa28.61■■■□□ 2.17
Ddx41-201ENSMUST00000021956 Baz1aO88379 1555 aa28.51■■■□□ 2.15
Ddx41-201ENSMUST00000021956 Trim41Q5NCC3 630 aa28.49■■■□□ 2.15
Ddx41-201ENSMUST00000021956 Cep164Q5DU05 1446 aa28.31■■■□□ 2.12
Ddx41-201ENSMUST00000021956 Supt5hO55201 1082 aaKnown RBP28.23■■■□□ 2.11
Ddx41-201ENSMUST00000021956 BicraF8VPZ9 1578 aa28.2■■■□□ 2.11
Ddx41-201ENSMUST00000021956 Crybg2B7ZCC2 1516 aa27.98■■■□□ 2.07
Ddx41-201ENSMUST00000021956 Smarca2Q6DIC0 1577 aa27.93■■■□□ 2.06
Ddx41-201ENSMUST00000021956 Neurod1Q60867 357 aa27.84■■■□□ 2.05
Ddx41-201ENSMUST00000021956 NefmP08553 848 aa27.79■■■□□ 2.04
Ddx41-201ENSMUST00000021956 Las1lA2BE28 776 aaKnown RBP27.65■■■□□ 2.02
Ddx41-201ENSMUST00000021956 Rsf1E9PWW9 1441 aaKnown RBP27.57■■■□□ 2
Ddx41-201ENSMUST00000021956 Zeb1Q64318 1117 aa27.54■■■□□ 2
Ddx41-201ENSMUST00000021956 Chic1Q8CBW7 227 aa27.48■■□□□ 1.99
Ddx41-201ENSMUST00000021956 Mier1Q5UAK0 511 aa27.47■■□□□ 1.99
Ddx41-201ENSMUST00000021956 Cngb1E1AZ71 1325 aa27.42■■□□□ 1.98
Ddx41-201ENSMUST00000021956 Gab3Q8BSM5 595 aa27.36■■□□□ 1.97
Ddx41-201ENSMUST00000021956 Sall2Q9QX96 1004 aa27.35■■□□□ 1.97
Ddx41-201ENSMUST00000021956 Brd4Q9ESU6 1400 aaKnown RBP27.34■■□□□ 1.97
Ddx41-201ENSMUST00000021956 Anks4bQ8K3X6 423 aa27.29■■□□□ 1.96
Ddx41-201ENSMUST00000021956 Golga3P55937 1487 aa27.27■■□□□ 1.96
Ddx41-201ENSMUST00000021956 Ccdc88bQ4QRL3 1481 aa27.26■■□□□ 1.95
Ddx41-201ENSMUST00000021956 Cecr2E9Q2Z1 1453 aa27.26■■□□□ 1.95
Ddx41-201ENSMUST00000021956 Pds5bQ4VA53 1446 aaKnown RBP27.14■■□□□ 1.93
Ddx41-201ENSMUST00000021956 Smarca4Q3TKT4 1613 aaKnown RBP27.1■■□□□ 1.93
Ddx41-201ENSMUST00000021956 Atad2bE9Q166 1460 aaKnown RBP27.03■■□□□ 1.92
Ddx41-201ENSMUST00000021956 1700123L14RikQ3V2K7 440 aa27.03■■□□□ 1.92
Ddx41-201ENSMUST00000021956 Synj1Q8CHC4 1574 aa26.94■■□□□ 1.9
Ddx41-201ENSMUST00000021956 Iqgap2Q3UQ44 1575 aa26.9■■□□□ 1.9
Ddx41-201ENSMUST00000021956 Csrnp3P59055 597 aa26.89■■□□□ 1.9
Ddx41-201ENSMUST00000021956 Top2bQ64511 1612 aa26.85■■□□□ 1.89
Ddx41-201ENSMUST00000021956 ClspnQ80YR7 1315 aa26.83■■□□□ 1.88
Ddx41-201ENSMUST00000021956 Cdk11bP24788 784 aaKnown RBP26.82■■□□□ 1.88
Ddx41-201ENSMUST00000021956 Thoc2B1AZI6 1594 aaKnown RBP26.81■■□□□ 1.88
Ddx41-201ENSMUST00000021956 Myt1Q8CFC2 1127 aa26.8■■□□□ 1.88
Ddx41-201ENSMUST00000021956 Wdr66E9Q743 1299 aa26.79■■□□□ 1.88
Ddx41-201ENSMUST00000021956 Aplp2Q06335 707 aa26.78■■□□□ 1.88
Ddx41-201ENSMUST00000021956 Aebp2Q9Z248 504 aaKnown RBP26.77■■□□□ 1.88
Ddx41-201ENSMUST00000021956 CftrP26361 1476 aa26.73■■□□□ 1.87
Ddx41-201ENSMUST00000021956 Nop58Q6DFW4 536 aaKnown RBP26.73■■□□□ 1.87
Ddx41-201ENSMUST00000021956 UbtfP25976 765 aaKnown RBP26.71■■□□□ 1.87
Ddx41-201ENSMUST00000021956 Rapgef2Q8CHG7 1496 aa26.71■■□□□ 1.87
Ddx41-201ENSMUST00000021956 Cttnbp2B9EJA2 1648 aa26.67■■□□□ 1.86
Ddx41-201ENSMUST00000021956 Esf1Q3V1V3 845 aaKnown RBP26.65■■□□□ 1.86
Ddx41-201ENSMUST00000021956 Ercc6F8VPZ5 1481 aa26.63■■□□□ 1.85
Ddx41-201ENSMUST00000021956 Dnajc5bQ9CQ94 199 aa26.61■■□□□ 1.85
Ddx41-201ENSMUST00000021956 CenpbP27790 599 aa26.58■■□□□ 1.85
Ddx41-201ENSMUST00000021956 Wdr62Q3U3T8 1523 aa26.56■■□□□ 1.84
Ddx41-201ENSMUST00000021956 Frmpd1A2AKB4 1549 aa26.53■■□□□ 1.84
Ddx41-201ENSMUST00000021956 TonslQ6NZL6 1363 aa26.5■■□□□ 1.83
Ddx41-201ENSMUST00000021956 Cc2d2aQ8CFW7 1633 aa26.47■■□□□ 1.83
Ddx41-201ENSMUST00000021956 Cep162Q6ZQ06 1403 aa26.44■■□□□ 1.82
Ddx41-201ENSMUST00000021956 Top2aQ01320 1528 aaKnown RBP26.43■■□□□ 1.82
Ddx41-201ENSMUST00000021956 Fmn1Q05860 1466 aa26.43■■□□□ 1.82
Ddx41-201ENSMUST00000021956 Unc13aQ4KUS2 1712 aa26.34■■□□□ 1.81
Ddx41-201ENSMUST00000021956 Fam135aQ6NS59 1506 aa26.28■■□□□ 1.8
Ddx41-201ENSMUST00000021956 Ncapd3Q6ZQK0 1506 aa26.24■■□□□ 1.79
Ddx41-201ENSMUST00000021956 Ppargc1bQ8VHJ7 1014 aa26.2■■□□□ 1.79
Ddx41-201ENSMUST00000021956 Myt1lP97500 1187 aa26.2■■□□□ 1.78
Ddx41-201ENSMUST00000021956 Clip1Q922J3 1391 aa26.17■■□□□ 1.78
Ddx41-201ENSMUST00000021956 Phldb1Q6PDH0 1371 aaKnown RBP26.15■■□□□ 1.78
Ddx41-201ENSMUST00000021956 Eif4g1Q6NZJ6 1600 aaKnown RBP26.14■■□□□ 1.78
Ddx41-201ENSMUST00000021956 Tnnt3Q9QZ47 272 aa26.07■■□□□ 1.76
Ddx41-201ENSMUST00000021956 Npm2Q80W85 207 aa26.03■■□□□ 1.76
Ddx41-201ENSMUST00000021956 Plekhg3Q4VAC9 1341 aa26.01■■□□□ 1.75
Ddx41-201ENSMUST00000021956 Gm38655A0A286YDK6 273 aa25.95■■□□□ 1.75
Ddx41-201ENSMUST00000021956 Ubl4bQ9CQ84 188 aa25.91■■□□□ 1.74
Ddx41-201ENSMUST00000021956 Kdm5bQ80Y84 1544 aa25.89■■□□□ 1.73
Ddx41-201ENSMUST00000021956 Hnrnpul2Q00PI9 745 aaKnown RBP25.81■■□□□ 1.72
Ddx41-201ENSMUST00000021956 Eea1Q8BL66 1411 aa25.79■■□□□ 1.72
Ddx41-201ENSMUST00000021956 Baz1bQ9Z277 1479 aa25.79■■□□□ 1.72
Ddx41-201ENSMUST00000021956 Ccdc18Q640L5 1455 aa25.78■■□□□ 1.72
Ddx41-201ENSMUST00000021956 Arhgap35Q91YM2 1499 aa25.78■■□□□ 1.72
Ddx41-201ENSMUST00000021956 Lamc3Q9R0B6 1581 aa25.77■■□□□ 1.72
Ddx41-201ENSMUST00000021956 Kif15Q6P9L6 1387 aa25.74■■□□□ 1.71
Ddx41-201ENSMUST00000021956 Arap1Q4LDD4 1452 aa25.74■■□□□ 1.71
Ddx41-201ENSMUST00000021956 TnnQ80Z71 1560 aa25.73■■□□□ 1.71
Ddx41-201ENSMUST00000021956 Arhgef5E9Q7D5 1581 aa25.71■■□□□ 1.71
Ddx41-201ENSMUST00000021956 Fam71e1A1L3C1 212 aa25.71■■□□□ 1.71
Ddx41-201ENSMUST00000021956 TchhA0A0B4J1F9 1599 aa25.71■■□□□ 1.71
Ddx41-201ENSMUST00000021956 NrkQ9R0G8 1455 aa25.69■■□□□ 1.7
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms