RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Igf1P05017 153 aa5.77□□□□□ -1.49
Trim39-205ENSMUST00000173369 PlnP61014 52 aa5.77□□□□□ -1.49
Trim39-205ENSMUST00000173369 4930556J24RikQ9D4U7 146 aa5.77□□□□□ -1.49
Trim39-205ENSMUST00000173369 2310050C09RikG5E8Z3 280 aa5.77□□□□□ -1.49
Trim39-205ENSMUST00000173369 Pglyrp1O88593 182 aa5.77□□□□□ -1.49
Trim39-205ENSMUST00000173369 P01757 117 aa5.77□□□□□ -1.49
Trim39-205ENSMUST00000173369 Rpl18aP62717 176 aaKnown RBP5.77□□□□□ -1.49
Trim39-205ENSMUST00000173369 HilpdaQ9JLS0 64 aa5.77□□□□□ -1.49
Trim39-205ENSMUST00000173369 Vmo1Q5SXG7 201 aa5.76□□□□□ -1.49
Trim39-205ENSMUST00000173369 Trav4n-4A0A075B615 110 aa5.76□□□□□ -1.49
Trim39-205ENSMUST00000173369 Ighv1-49A0A0A6YWX2 117 aa5.76□□□□□ -1.49
Trim39-205ENSMUST00000173369 Gm10295Q8CCF3 114 aa5.76□□□□□ -1.49
Trim39-205ENSMUST00000173369 Znf414Q9DCK4 299 aa5.76□□□□□ -1.49
Trim39-205ENSMUST00000173369 Phlda3Q9WV95 125 aa5.76□□□□□ -1.49
Trim39-205ENSMUST00000173369 Trav14d-3-dv8A0A075B619 120 aa5.75□□□□□ -1.49
Trim39-205ENSMUST00000173369 Gm17509Q9CZ61 145 aa5.75□□□□□ -1.49
Trim39-205ENSMUST00000173369 OtorQ9JIE3 128 aa5.75□□□□□ -1.49
Trim39-205ENSMUST00000173369 Igkv4-61A0A0G2JH00 117 aa5.75□□□□□ -1.49
Trim39-205ENSMUST00000173369 Gm10135F6TEE5 83 aa5.75□□□□□ -1.49
Trim39-205ENSMUST00000173369 Tomm7Q9D173 55 aa5.75□□□□□ -1.49
Trim39-205ENSMUST00000173369 Ighv1-85A0A075B5Y6 117 aa5.75□□□□□ -1.49
Trim39-205ENSMUST00000173369 Tmem243B2RVB9 118 aa5.75□□□□□ -1.49
Trim39-205ENSMUST00000173369 Ormdl3Q9CPZ6 153 aa5.75□□□□□ -1.49
Trim39-205ENSMUST00000173369 AplnQ9R0R4 77 aa5.75□□□□□ -1.49
Trim39-205ENSMUST00000173369 Vsig4F6TUL9 280 aa5.74□□□□□ -1.49
Trim39-205ENSMUST00000173369 PdpnQ62011 172 aa5.74□□□□□ -1.49
Trim39-205ENSMUST00000173369 Tmem14cQ9CQN6 114 aa5.74□□□□□ -1.49
Trim39-205ENSMUST00000173369 Pfn2Q9JJV2 140 aa5.74□□□□□ -1.49
Trim39-205ENSMUST00000173369 Krtap27-1E9PX37 202 aa5.74□□□□□ -1.49
Trim39-205ENSMUST00000173369 Iah1Q9DB29 249 aa5.74□□□□□ -1.49
Trim39-205ENSMUST00000173369 Trbv13-2A0A140T8N6 113 aa5.73□□□□□ -1.49
Trim39-205ENSMUST00000173369 Gm10271F6WY25 52 aa5.73□□□□□ -1.49
Trim39-205ENSMUST00000173369 Sdhaf1Q3U276 118 aa5.73□□□□□ -1.49
Trim39-205ENSMUST00000173369 4930535I16RikQ9CUI2 172 aa5.73□□□□□ -1.49
Trim39-205ENSMUST00000173369 P06334 169 aa5.72□□□□□ -1.49
Trim39-205ENSMUST00000173369 CirbpP60824 172 aaKnown RBP5.72□□□□□ -1.49
Trim39-205ENSMUST00000173369 Rpl36aP83882 106 aaKnown RBP5.72□□□□□ -1.49
Trim39-205ENSMUST00000173369 Gm10767Q3TQP0 103 aa5.72□□□□□ -1.49
Trim39-205ENSMUST00000173369 A930002H24RikQ8C8Y3 163 aa5.72□□□□□ -1.49
Trim39-205ENSMUST00000173369 Dnah7cA0A087WR13 4024 aa5.72□□□□□ -1.49
Trim39-205ENSMUST00000173369 Gm11444F6QMA6 170 aa5.72□□□□□ -1.49
Trim39-205ENSMUST00000173369 Igkv4-53A0A0G2JFC6 119 aa5.71□□□□□ -1.49
Trim39-205ENSMUST00000173369 Reg3bP35230 175 aa5.71□□□□□ -1.49
Trim39-205ENSMUST00000173369 Gm1553Q66VB7 94 aa5.71□□□□□ -1.49
Trim39-205ENSMUST00000173369 Trav4-3A0A0B4J1K1 110 aa5.71□□□□□ -1.5
Trim39-205ENSMUST00000173369 A530084C06RikQ3UTW2 186 aa5.71□□□□□ -1.5
Trim39-205ENSMUST00000173369 AY074887Q8R5F9 132 aa5.71□□□□□ -1.5
Trim39-205ENSMUST00000173369 Dnah1E9Q8T7 4250 aa5.71□□□□□ -1.5
Trim39-205ENSMUST00000173369 Tmem223Q9CQE2 199 aaKnown RBP5.71□□□□□ -1.5
Trim39-205ENSMUST00000173369 Dync2h1Q45VK7 4306 aa5.7□□□□□ -1.5
Trim39-205ENSMUST00000173369 Gm44965A0A0N4SVR3 59 aa5.7□□□□□ -1.5
Trim39-205ENSMUST00000173369 C530025M09RikF6RGA8 229 aa5.7□□□□□ -1.5
Trim39-205ENSMUST00000173369 Rab37Q9JKM7 223 aa5.7□□□□□ -1.5
Trim39-205ENSMUST00000173369 Dnah11E9Q7N9 4488 aa5.7□□□□□ -1.5
Trim39-205ENSMUST00000173369 Igkv1-99F6XWB2 120 aa5.7□□□□□ -1.5
Trim39-205ENSMUST00000173369 P01794 123 aa5.7□□□□□ -1.5
Trim39-205ENSMUST00000173369 Rpl39P62892 51 aa5.7□□□□□ -1.5
Trim39-205ENSMUST00000173369 Dnah9B1AR51 4484 aa5.7□□□□□ -1.5
Trim39-205ENSMUST00000173369 Xcl1P47993 114 aa5.69□□□□□ -1.5
Trim39-205ENSMUST00000173369 2310061N02RikQ9D6S9 174 aa5.69□□□□□ -1.5
Trim39-205ENSMUST00000173369 Plac1Q9JI83 173 aa5.69□□□□□ -1.5
Trim39-205ENSMUST00000173369 Ormdl2Q9CQZ0 153 aa5.69□□□□□ -1.5
Trim39-205ENSMUST00000173369 Naa38Q9D2U5 125 aa5.69□□□□□ -1.5
Trim39-205ENSMUST00000173369 Defa28D3Z1V9 94 aa5.68□□□□□ -1.5
Trim39-205ENSMUST00000173369 Snhg11Q4G0K9 87 aa5.68□□□□□ -1.5
Trim39-205ENSMUST00000173369 Spink4O35679 86 aa5.68□□□□□ -1.5
Trim39-205ENSMUST00000173369 Vps13dB1ART2 4390 aa5.68□□□□□ -1.5
Trim39-205ENSMUST00000173369 Dnah5Q8VHE6 4621 aa5.68□□□□□ -1.5
Trim39-205ENSMUST00000173369 P01837 106 aa5.68□□□□□ -1.5
Trim39-205ENSMUST00000173369 Gm10772F7AIG4 85 aa5.67□□□□□ -1.5
Trim39-205ENSMUST00000173369 Ighv8-13A0A075B5Y0 101 aa5.67□□□□□ -1.5
Trim39-205ENSMUST00000173369 Trav7-6A0A075B640 112 aa5.67□□□□□ -1.5
Trim39-205ENSMUST00000173369 Igkv4-78A0A0A6YYE5 119 aa5.67□□□□□ -1.5
Trim39-205ENSMUST00000173369 Pet100P0DJE0 76 aa5.66□□□□□ -1.5
Trim39-205ENSMUST00000173369 CnfnQ6PCW6 111 aa5.66□□□□□ -1.5
Trim39-205ENSMUST00000173369 Snai3Q9QY31 287 aa5.66□□□□□ -1.5
Trim39-205ENSMUST00000173369 U90926O08546 118 aa5.66□□□□□ -1.5
Trim39-205ENSMUST00000173369 Cox17P56394 63 aa5.66□□□□□ -1.5
Trim39-205ENSMUST00000173369 Spint4Q9D263 159 aa5.66□□□□□ -1.5
Trim39-205ENSMUST00000173369 Timm17bQ9Z0V7 172 aa5.66□□□□□ -1.5
Trim39-205ENSMUST00000173369 Gm2696A0A1W2P709 240 aa5.65□□□□□ -1.5
Trim39-205ENSMUST00000173369 Ndufa4Q62425 82 aaKnown RBP5.65□□□□□ -1.5
Trim39-205ENSMUST00000173369 Trav14-2A0A075B694 121 aa5.65□□□□□ -1.51
Trim39-205ENSMUST00000173369 1700042G07RikB1AUF7 90 aa5.65□□□□□ -1.51
Trim39-205ENSMUST00000173369 Eif4ebp1Q60876 117 aa5.65□□□□□ -1.51
Trim39-205ENSMUST00000173369 Polr2kQ63871 58 aa5.65□□□□□ -1.51
Trim39-205ENSMUST00000173369 SnurfQ9WU12 71 aa5.65□□□□□ -1.51
Trim39-205ENSMUST00000173369 Fgfbp3Q1HCM0 245 aa5.64□□□□□ -1.51
Trim39-205ENSMUST00000173369 A0A286YE02 88 aa5.64□□□□□ -1.51
Trim39-205ENSMUST00000173369 Ighv1-72P01751 139 aa5.64□□□□□ -1.51
Trim39-205ENSMUST00000173369 Defb47Q30KN1 79 aa5.64□□□□□ -1.51
Trim39-205ENSMUST00000173369 Klk9Q32M27 251 aa5.64□□□□□ -1.51
Trim39-205ENSMUST00000173369 Ovol2Q8CIV7 274 aa5.64□□□□□ -1.51
Trim39-205ENSMUST00000173369 Igkv3-1A0A075B5P1 119 aa5.64□□□□□ -1.51
Trim39-205ENSMUST00000173369 Brd3osA0A1B0GRB6 84 aa5.64□□□□□ -1.51
Trim39-205ENSMUST00000173369 Plac8Q9JI48 112 aa5.64□□□□□ -1.51
Trim39-205ENSMUST00000173369 Q5BN45 167 aa5.63□□□□□ -1.51
Trim39-205ENSMUST00000173369 Bles03Q8VD62 251 aa5.63□□□□□ -1.51
Trim39-205ENSMUST00000173369 Gm29423A0A087WRM1 55 aa5.62□□□□□ -1.51
Trim39-205ENSMUST00000173369 Vpreb2P13373 142 aa5.62□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 113.8 ms