Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ndufa4Q62425 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Ndufa4Q62425 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ndufa4Q62425 Gm25239-201ENSMUST00000174915 86 ntBASIC24.05■■□□□ 1.44
Ndufa4Q62425 Psd-208ENSMUST00000224556 2034 ntBASIC23.55■■□□□ 1.36
Ndufa4Q62425 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ndufa4Q62425 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ndufa4Q62425 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ndufa4Q62425 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ndufa4Q62425 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ndufa4Q62425 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ndufa4Q62425 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ndufa4Q62425 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ndufa4Q62425 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ndufa4Q62425 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ndufa4Q62425 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.09■■□□□ 1.13
Ndufa4Q62425 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ndufa4Q62425 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ndufa4Q62425 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ndufa4Q62425 Gm15042-201ENSMUST00000120212 883 ntBASIC21.86■■□□□ 1.09
Ndufa4Q62425 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ndufa4Q62425 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ndufa4Q62425 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ndufa4Q62425 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ndufa4Q62425 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ndufa4Q62425 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ndufa4Q62425 Gm15045-201ENSMUST00000117359 883 ntBASIC21.49■■□□□ 1.03
Ndufa4Q62425 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.47■■□□□ 1.03
Ndufa4Q62425 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ndufa4Q62425 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.37■■□□□ 1.01
Ndufa4Q62425 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.36■■□□□ 1.01
Ndufa4Q62425 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ndufa4Q62425 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ndufa4Q62425 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndufa4Q62425 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.25■□□□□ 0.99
Ndufa4Q62425 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ndufa4Q62425 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ndufa4Q62425 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ndufa4Q62425 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ndufa4Q62425 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.16■□□□□ 0.98
Ndufa4Q62425 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.15■□□□□ 0.98
Ndufa4Q62425 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ndufa4Q62425 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ndufa4Q62425 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.02■□□□□ 0.95
Ndufa4Q62425 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ndufa4Q62425 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ndufa4Q62425 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ndufa4Q62425 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ndufa4Q62425 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ndufa4Q62425 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ndufa4Q62425 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ndufa4Q62425 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ndufa4Q62425 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ndufa4Q62425 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ndufa4Q62425 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ndufa4Q62425 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ndufa4Q62425 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ndufa4Q62425 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.53■□□□□ 0.88
Ndufa4Q62425 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ndufa4Q62425 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ndufa4Q62425 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ndufa4Q62425 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ndufa4Q62425 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ndufa4Q62425 Gm24109-201ENSMUST00000175489 103 ntBASIC20.45■□□□□ 0.86
Ndufa4Q62425 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndufa4Q62425 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ndufa4Q62425 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ndufa4Q62425 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ndufa4Q62425 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ndufa4Q62425 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ndufa4Q62425 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ndufa4Q62425 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ndufa4Q62425 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Ndufa4Q62425 Gm23366-201ENSMUST00000175022 89 ntBASIC20.25■□□□□ 0.83
Ndufa4Q62425 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ndufa4Q62425 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ndufa4Q62425 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ndufa4Q62425 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ndufa4Q62425 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ndufa4Q62425 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ndufa4Q62425 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ndufa4Q62425 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ndufa4Q62425 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ndufa4Q62425 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ndufa4Q62425 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.09■□□□□ 0.81
Ndufa4Q62425 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.07■□□□□ 0.8
Ndufa4Q62425 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndufa4Q62425 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ndufa4Q62425 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ndufa4Q62425 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ndufa4Q62425 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ndufa4Q62425 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ndufa4Q62425 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Ndufa4Q62425 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ndufa4Q62425 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ndufa4Q62425 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ndufa4Q62425 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndufa4Q62425 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndufa4Q62425 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ndufa4Q62425 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms