Protein–RNA interactions for Protein: Q6PCW6

Cnfn, Cornifelin, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CnfnQ6PCW6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CnfnQ6PCW6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
CnfnQ6PCW6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CnfnQ6PCW6 Gm25239-201ENSMUST00000174915 86 ntBASIC24.52■■□□□ 1.52
CnfnQ6PCW6 Psd-208ENSMUST00000224556 2034 ntBASIC24.16■■□□□ 1.46
CnfnQ6PCW6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CnfnQ6PCW6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CnfnQ6PCW6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CnfnQ6PCW6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CnfnQ6PCW6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CnfnQ6PCW6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CnfnQ6PCW6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CnfnQ6PCW6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CnfnQ6PCW6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CnfnQ6PCW6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CnfnQ6PCW6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.6■■□□□ 1.21
CnfnQ6PCW6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CnfnQ6PCW6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CnfnQ6PCW6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CnfnQ6PCW6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CnfnQ6PCW6 Gm15042-201ENSMUST00000120212 883 ntBASIC22.33■■□□□ 1.17
CnfnQ6PCW6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CnfnQ6PCW6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CnfnQ6PCW6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CnfnQ6PCW6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CnfnQ6PCW6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CnfnQ6PCW6 Gm15045-201ENSMUST00000117359 883 ntBASIC22■■□□□ 1.11
CnfnQ6PCW6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22■■□□□ 1.11
CnfnQ6PCW6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.92■■□□□ 1.1
CnfnQ6PCW6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CnfnQ6PCW6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.87■■□□□ 1.09
CnfnQ6PCW6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CnfnQ6PCW6 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.76■■□□□ 1.07
CnfnQ6PCW6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CnfnQ6PCW6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CnfnQ6PCW6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CnfnQ6PCW6 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.7■■□□□ 1.06
CnfnQ6PCW6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CnfnQ6PCW6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CnfnQ6PCW6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CnfnQ6PCW6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CnfnQ6PCW6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.57■■□□□ 1.04
CnfnQ6PCW6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.54■■□□□ 1.04
CnfnQ6PCW6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CnfnQ6PCW6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CnfnQ6PCW6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CnfnQ6PCW6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CnfnQ6PCW6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CnfnQ6PCW6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CnfnQ6PCW6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CnfnQ6PCW6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CnfnQ6PCW6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CnfnQ6PCW6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CnfnQ6PCW6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CnfnQ6PCW6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CnfnQ6PCW6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CnfnQ6PCW6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CnfnQ6PCW6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CnfnQ6PCW6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CnfnQ6PCW6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.98■□□□□ 0.95
CnfnQ6PCW6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CnfnQ6PCW6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CnfnQ6PCW6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CnfnQ6PCW6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CnfnQ6PCW6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CnfnQ6PCW6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CnfnQ6PCW6 Gm24109-201ENSMUST00000175489 103 ntBASIC20.88■□□□□ 0.93
CnfnQ6PCW6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CnfnQ6PCW6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CnfnQ6PCW6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CnfnQ6PCW6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CnfnQ6PCW6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CnfnQ6PCW6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CnfnQ6PCW6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CnfnQ6PCW6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CnfnQ6PCW6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CnfnQ6PCW6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CnfnQ6PCW6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CnfnQ6PCW6 Gm23366-201ENSMUST00000175022 89 ntBASIC20.63■□□□□ 0.89
CnfnQ6PCW6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.6■□□□□ 0.89
CnfnQ6PCW6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CnfnQ6PCW6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CnfnQ6PCW6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CnfnQ6PCW6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CnfnQ6PCW6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CnfnQ6PCW6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CnfnQ6PCW6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.46■□□□□ 0.87
CnfnQ6PCW6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CnfnQ6PCW6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CnfnQ6PCW6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CnfnQ6PCW6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CnfnQ6PCW6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CnfnQ6PCW6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CnfnQ6PCW6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CnfnQ6PCW6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CnfnQ6PCW6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CnfnQ6PCW6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CnfnQ6PCW6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CnfnQ6PCW6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CnfnQ6PCW6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms