Protein–RNA interactions for Protein: A0A075B5Y6

Ighv1-85, Immunoglobulin heavy variable 1-85 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-85A0A075B5Y6 Gm25239-201ENSMUST00000174915 86 ntBASIC25.22■■□□□ 1.63
Ighv1-85A0A075B5Y6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ighv1-85A0A075B5Y6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Ighv1-85A0A075B5Y6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ighv1-85A0A075B5Y6 Psd-208ENSMUST00000224556 2034 ntBASIC23.16■■□□□ 1.3
Ighv1-85A0A075B5Y6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ighv1-85A0A075B5Y6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ighv1-85A0A075B5Y6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ighv1-85A0A075B5Y6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ighv1-85A0A075B5Y6 Gm15042-201ENSMUST00000120212 883 ntBASIC22.56■■□□□ 1.2
Ighv1-85A0A075B5Y6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ighv1-85A0A075B5Y6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ighv1-85A0A075B5Y6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ighv1-85A0A075B5Y6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ighv1-85A0A075B5Y6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ighv1-85A0A075B5Y6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ighv1-85A0A075B5Y6 Gm15045-201ENSMUST00000117359 883 ntBASIC22.11■■□□□ 1.13
Ighv1-85A0A075B5Y6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.97■■□□□ 1.11
Ighv1-85A0A075B5Y6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ighv1-85A0A075B5Y6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ighv1-85A0A075B5Y6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ighv1-85A0A075B5Y6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv1-85A0A075B5Y6 Gm24109-201ENSMUST00000175489 103 ntBASIC21.61■■□□□ 1.05
Ighv1-85A0A075B5Y6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv1-85A0A075B5Y6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ighv1-85A0A075B5Y6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ighv1-85A0A075B5Y6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv1-85A0A075B5Y6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv1-85A0A075B5Y6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv1-85A0A075B5Y6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ighv1-85A0A075B5Y6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ighv1-85A0A075B5Y6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ighv1-85A0A075B5Y6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.33■■□□□ 1
Ighv1-85A0A075B5Y6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ighv1-85A0A075B5Y6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-85A0A075B5Y6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.24■□□□□ 0.99
Ighv1-85A0A075B5Y6 Gm23366-201ENSMUST00000175022 89 ntBASIC21.17■□□□□ 0.98
Ighv1-85A0A075B5Y6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv1-85A0A075B5Y6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.17■□□□□ 0.98
Ighv1-85A0A075B5Y6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-85A0A075B5Y6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-85A0A075B5Y6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-85A0A075B5Y6 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.01■□□□□ 0.95
Ighv1-85A0A075B5Y6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-85A0A075B5Y6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-85A0A075B5Y6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-85A0A075B5Y6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.9■□□□□ 0.94
Ighv1-85A0A075B5Y6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ighv1-85A0A075B5Y6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.72■□□□□ 0.91
Ighv1-85A0A075B5Y6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ighv1-85A0A075B5Y6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.71■□□□□ 0.91
Ighv1-85A0A075B5Y6 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.67■□□□□ 0.9
Ighv1-85A0A075B5Y6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ighv1-85A0A075B5Y6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ighv1-85A0A075B5Y6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ighv1-85A0A075B5Y6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ighv1-85A0A075B5Y6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-85A0A075B5Y6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-85A0A075B5Y6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv1-85A0A075B5Y6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv1-85A0A075B5Y6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv1-85A0A075B5Y6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-85A0A075B5Y6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv1-85A0A075B5Y6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.36■□□□□ 0.85
Ighv1-85A0A075B5Y6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ighv1-85A0A075B5Y6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-85A0A075B5Y6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv1-85A0A075B5Y6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv1-85A0A075B5Y6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ighv1-85A0A075B5Y6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-85A0A075B5Y6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ighv1-85A0A075B5Y6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ighv1-85A0A075B5Y6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv1-85A0A075B5Y6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv1-85A0A075B5Y6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ighv1-85A0A075B5Y6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-85A0A075B5Y6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Ighv1-85A0A075B5Y6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-85A0A075B5Y6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ighv1-85A0A075B5Y6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-85A0A075B5Y6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-85A0A075B5Y6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.94■□□□□ 0.78
Ighv1-85A0A075B5Y6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-85A0A075B5Y6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ighv1-85A0A075B5Y6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ighv1-85A0A075B5Y6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.91■□□□□ 0.78
Ighv1-85A0A075B5Y6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-85A0A075B5Y6 Gm27325-201ENSMUST00000175467 74 ntBASIC19.84■□□□□ 0.77
Ighv1-85A0A075B5Y6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-85A0A075B5Y6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-85A0A075B5Y6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-85A0A075B5Y6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-85A0A075B5Y6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ighv1-85A0A075B5Y6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-85A0A075B5Y6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-85A0A075B5Y6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-85A0A075B5Y6 Gm25238-201ENSMUST00000174914 89 ntBASIC19.72■□□□□ 0.75
Ighv1-85A0A075B5Y6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.71■□□□□ 0.75
Ighv1-85A0A075B5Y6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Ighv1-85A0A075B5Y6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms