Protein–RNA interactions for Protein: A0A0A6YYE5

Igkv4-78, Immunoglobulin kappa variable 4-78 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-78A0A0A6YYE5 Gm25239-201ENSMUST00000174915 86 ntBASIC24.36■■□□□ 1.49
Igkv4-78A0A0A6YYE5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Igkv4-78A0A0A6YYE5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Igkv4-78A0A0A6YYE5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Igkv4-78A0A0A6YYE5 Psd-208ENSMUST00000224556 2034 ntBASIC22.65■■□□□ 1.22
Igkv4-78A0A0A6YYE5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Igkv4-78A0A0A6YYE5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv4-78A0A0A6YYE5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Igkv4-78A0A0A6YYE5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv4-78A0A0A6YYE5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Igkv4-78A0A0A6YYE5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Igkv4-78A0A0A6YYE5 Gm15042-201ENSMUST00000120212 883 ntBASIC21.89■■□□□ 1.09
Igkv4-78A0A0A6YYE5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv4-78A0A0A6YYE5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv4-78A0A0A6YYE5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv4-78A0A0A6YYE5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv4-78A0A0A6YYE5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.64■■□□□ 1.06
Igkv4-78A0A0A6YYE5 Gm15045-201ENSMUST00000117359 883 ntBASIC21.51■■□□□ 1.03
Igkv4-78A0A0A6YYE5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv4-78A0A0A6YYE5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Igkv4-78A0A0A6YYE5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv4-78A0A0A6YYE5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv4-78A0A0A6YYE5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Igkv4-78A0A0A6YYE5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv4-78A0A0A6YYE5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Igkv4-78A0A0A6YYE5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv4-78A0A0A6YYE5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv4-78A0A0A6YYE5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv4-78A0A0A6YYE5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.97■□□□□ 0.95
Igkv4-78A0A0A6YYE5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Igkv4-78A0A0A6YYE5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv4-78A0A0A6YYE5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Igkv4-78A0A0A6YYE5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.86■□□□□ 0.93
Igkv4-78A0A0A6YYE5 Gm24109-201ENSMUST00000175489 103 ntBASIC20.84■□□□□ 0.93
Igkv4-78A0A0A6YYE5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv4-78A0A0A6YYE5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Igkv4-78A0A0A6YYE5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv4-78A0A0A6YYE5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.71■□□□□ 0.91
Igkv4-78A0A0A6YYE5 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.55■□□□□ 0.88
Igkv4-78A0A0A6YYE5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv4-78A0A0A6YYE5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv4-78A0A0A6YYE5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv4-78A0A0A6YYE5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.49■□□□□ 0.87
Igkv4-78A0A0A6YYE5 Gm23366-201ENSMUST00000175022 89 ntBASIC20.43■□□□□ 0.86
Igkv4-78A0A0A6YYE5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv4-78A0A0A6YYE5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv4-78A0A0A6YYE5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv4-78A0A0A6YYE5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.34■□□□□ 0.85
Igkv4-78A0A0A6YYE5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv4-78A0A0A6YYE5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Igkv4-78A0A0A6YYE5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv4-78A0A0A6YYE5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv4-78A0A0A6YYE5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv4-78A0A0A6YYE5 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.12■□□□□ 0.81
Igkv4-78A0A0A6YYE5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.12■□□□□ 0.81
Igkv4-78A0A0A6YYE5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Igkv4-78A0A0A6YYE5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv4-78A0A0A6YYE5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv4-78A0A0A6YYE5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv4-78A0A0A6YYE5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv4-78A0A0A6YYE5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv4-78A0A0A6YYE5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Igkv4-78A0A0A6YYE5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Igkv4-78A0A0A6YYE5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20■□□□□ 0.79
Igkv4-78A0A0A6YYE5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Igkv4-78A0A0A6YYE5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Igkv4-78A0A0A6YYE5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Igkv4-78A0A0A6YYE5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Igkv4-78A0A0A6YYE5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Igkv4-78A0A0A6YYE5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv4-78A0A0A6YYE5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Igkv4-78A0A0A6YYE5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Igkv4-78A0A0A6YYE5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Igkv4-78A0A0A6YYE5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Igkv4-78A0A0A6YYE5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv4-78A0A0A6YYE5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Igkv4-78A0A0A6YYE5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv4-78A0A0A6YYE5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv4-78A0A0A6YYE5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Igkv4-78A0A0A6YYE5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv4-78A0A0A6YYE5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv4-78A0A0A6YYE5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv4-78A0A0A6YYE5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv4-78A0A0A6YYE5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv4-78A0A0A6YYE5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv4-78A0A0A6YYE5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.45■□□□□ 0.7
Igkv4-78A0A0A6YYE5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Igkv4-78A0A0A6YYE5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv4-78A0A0A6YYE5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv4-78A0A0A6YYE5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv4-78A0A0A6YYE5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Igkv4-78A0A0A6YYE5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv4-78A0A0A6YYE5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv4-78A0A0A6YYE5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv4-78A0A0A6YYE5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv4-78A0A0A6YYE5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv4-78A0A0A6YYE5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv4-78A0A0A6YYE5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv4-78A0A0A6YYE5 Gm27325-201ENSMUST00000175467 74 ntBASIC19.28■□□□□ 0.68
Igkv4-78A0A0A6YYE5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms