Protein–RNA interactions for Protein: Q62011

Pdpn, Podoplanin, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdpnQ62011 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PdpnQ62011 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
PdpnQ62011 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PdpnQ62011 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PdpnQ62011 Psd-208ENSMUST00000224556 2034 ntBASIC23.89■■□□□ 1.41
PdpnQ62011 Gm25239-201ENSMUST00000174915 86 ntBASIC23.88■■□□□ 1.41
PdpnQ62011 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PdpnQ62011 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PdpnQ62011 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PdpnQ62011 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PdpnQ62011 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PdpnQ62011 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdpnQ62011 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PdpnQ62011 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PdpnQ62011 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PdpnQ62011 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PdpnQ62011 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PdpnQ62011 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PdpnQ62011 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.18■■□□□ 1.14
PdpnQ62011 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PdpnQ62011 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PdpnQ62011 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PdpnQ62011 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PdpnQ62011 Gm15042-201ENSMUST00000120212 883 ntBASIC21.78■■□□□ 1.08
PdpnQ62011 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.69■■□□□ 1.06
PdpnQ62011 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PdpnQ62011 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PdpnQ62011 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PdpnQ62011 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.54■■□□□ 1.04
PdpnQ62011 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.52■■□□□ 1.04
PdpnQ62011 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PdpnQ62011 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PdpnQ62011 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PdpnQ62011 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PdpnQ62011 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PdpnQ62011 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.43■■□□□ 1.02
PdpnQ62011 Gm15045-201ENSMUST00000117359 883 ntBASIC21.43■■□□□ 1.02
PdpnQ62011 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.41■■□□□ 1.02
PdpnQ62011 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.41■■□□□ 1.02
PdpnQ62011 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PdpnQ62011 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PdpnQ62011 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PdpnQ62011 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PdpnQ62011 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PdpnQ62011 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PdpnQ62011 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PdpnQ62011 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PdpnQ62011 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PdpnQ62011 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PdpnQ62011 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.07■□□□□ 0.96
PdpnQ62011 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PdpnQ62011 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PdpnQ62011 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdpnQ62011 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PdpnQ62011 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PdpnQ62011 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PdpnQ62011 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PdpnQ62011 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PdpnQ62011 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PdpnQ62011 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
PdpnQ62011 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PdpnQ62011 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PdpnQ62011 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PdpnQ62011 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PdpnQ62011 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PdpnQ62011 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PdpnQ62011 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.66■□□□□ 0.9
PdpnQ62011 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PdpnQ62011 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PdpnQ62011 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PdpnQ62011 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PdpnQ62011 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdpnQ62011 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PdpnQ62011 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PdpnQ62011 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PdpnQ62011 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdpnQ62011 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdpnQ62011 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.39■□□□□ 0.86
PdpnQ62011 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PdpnQ62011 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PdpnQ62011 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PdpnQ62011 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PdpnQ62011 Gm24109-201ENSMUST00000175489 103 ntBASIC20.28■□□□□ 0.84
PdpnQ62011 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PdpnQ62011 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdpnQ62011 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.21■□□□□ 0.83
PdpnQ62011 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PdpnQ62011 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PdpnQ62011 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdpnQ62011 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdpnQ62011 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdpnQ62011 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PdpnQ62011 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PdpnQ62011 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PdpnQ62011 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PdpnQ62011 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PdpnQ62011 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.1■□□□□ 0.81
PdpnQ62011 Gm23366-201ENSMUST00000175022 89 ntBASIC20.09■□□□□ 0.81
PdpnQ62011 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PdpnQ62011 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms