Protein–RNA interactions for Protein: P60824

Cirbp, Cold-inducible RNA-binding protein, mousemouse

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CirbpP60824 Gm25239-201ENSMUST00000174915 86 ntBASIC26.64■■□□□ 1.86
CirbpP60824 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CirbpP60824 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CirbpP60824 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CirbpP60824 Gm15042-201ENSMUST00000120212 883 ntBASIC23.38■■□□□ 1.33
CirbpP60824 Gm24109-201ENSMUST00000175489 103 ntBASIC23.08■■□□□ 1.29
CirbpP60824 Gm15045-201ENSMUST00000117359 883 ntBASIC22.92■■□□□ 1.26
CirbpP60824 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CirbpP60824 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CirbpP60824 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CirbpP60824 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CirbpP60824 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CirbpP60824 Gm23366-201ENSMUST00000175022 89 ntBASIC22.26■■□□□ 1.15
CirbpP60824 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CirbpP60824 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CirbpP60824 Psd-208ENSMUST00000224556 2034 ntBASIC22.07■■□□□ 1.12
CirbpP60824 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CirbpP60824 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CirbpP60824 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CirbpP60824 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.8■■□□□ 1.08
CirbpP60824 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CirbpP60824 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CirbpP60824 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CirbpP60824 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CirbpP60824 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
CirbpP60824 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CirbpP60824 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
CirbpP60824 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CirbpP60824 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CirbpP60824 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CirbpP60824 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.4■■□□□ 1.02
CirbpP60824 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.39■■□□□ 1.01
CirbpP60824 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CirbpP60824 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.3■■□□□ 1
CirbpP60824 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CirbpP60824 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CirbpP60824 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
CirbpP60824 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CirbpP60824 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CirbpP60824 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CirbpP60824 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CirbpP60824 Gm25238-201ENSMUST00000174914 89 ntBASIC21■□□□□ 0.95
CirbpP60824 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CirbpP60824 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.99■□□□□ 0.95
CirbpP60824 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.97■□□□□ 0.95
CirbpP60824 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CirbpP60824 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CirbpP60824 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CirbpP60824 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CirbpP60824 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CirbpP60824 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CirbpP60824 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CirbpP60824 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CirbpP60824 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CirbpP60824 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CirbpP60824 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.63■□□□□ 0.89
CirbpP60824 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.56■□□□□ 0.88
CirbpP60824 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CirbpP60824 Gm27325-201ENSMUST00000175467 74 ntBASIC20.53■□□□□ 0.88
CirbpP60824 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
CirbpP60824 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CirbpP60824 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.43■□□□□ 0.86
CirbpP60824 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.39■□□□□ 0.86
CirbpP60824 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CirbpP60824 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CirbpP60824 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CirbpP60824 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CirbpP60824 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.28■□□□□ 0.84
CirbpP60824 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.25■□□□□ 0.83
CirbpP60824 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CirbpP60824 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CirbpP60824 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CirbpP60824 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
CirbpP60824 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CirbpP60824 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CirbpP60824 Rab21-202ENSMUST00000218831 843 ntBASIC20.09■□□□□ 0.81
CirbpP60824 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CirbpP60824 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.05■□□□□ 0.8
CirbpP60824 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CirbpP60824 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.05■□□□□ 0.8
CirbpP60824 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CirbpP60824 Gm25262-201ENSMUST00000174934 133 ntBASIC20.04■□□□□ 0.8
CirbpP60824 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CirbpP60824 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20■□□□□ 0.79
CirbpP60824 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CirbpP60824 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CirbpP60824 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.97■□□□□ 0.79
CirbpP60824 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.96■□□□□ 0.79
CirbpP60824 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CirbpP60824 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CirbpP60824 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CirbpP60824 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CirbpP60824 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CirbpP60824 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CirbpP60824 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.88■□□□□ 0.77
CirbpP60824 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CirbpP60824 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CirbpP60824 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CirbpP60824 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CirbpP60824 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms