RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 Igkv8-16A0A0G2JDG9 121 aa11.32□□□□□ -0.6
Rpf1-201ENSMUST00000029838 C530025M09RikF6RGA8 229 aa11.32□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Spink13Q3UTS8 97 aa11.32□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Gm26920S4R2A5 56 aa11.32□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Ly6hQ9WUC3 139 aa11.31□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Cox6cQ9CPQ1 76 aa11.3□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Hbb-b2P02089 147 aa11.3□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Defb47Q30KN1 79 aa11.3□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Igkv4-92A0A0B4J1I2 117 aa11.29□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Dnah14A0A140LIJ4 4489 aa11.29□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Dnah10D3YYQ8 4591 aa11.29□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Gm11563B1AQ90 168 aa11.28□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Hint1P70349 126 aaKnown RBP11.28□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Krtap4-7Q9D732 168 aa11.28□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Trav13-2A0A075B649 110 aa11.27□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Gm10518F6UQQ9 182 aa11.27□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Hrct1Q9D6B9 109 aa11.27□□□□□ -0.6
Rpf1-201ENSMUST00000029838 Reg3dQ9QUS9 175 aa11.27□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Gm29423A0A087WRM1 55 aa11.26□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Camk2n2Q78WH7 79 aa11.26□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Dnal4Q9DCM4 105 aa11.26□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Igkv8-18A0A0B4J1J3 123 aa11.25□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Csdc2Q91YQ3 154 aa11.25□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Rpl28P41105 137 aaKnown RBP11.24□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Pglyrp4Q0VB07 374 aa11.24□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Ube2wQ8VDW4 151 aa11.24□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Trav14-1A0A0G2JF94 121 aa11.24□□□□□ -0.61
Rpf1-201ENSMUST00000029838 MifP34884 115 aaKnown RBP11.24□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Cox7bP56393 80 aa11.24□□□□□ -0.61
Rpf1-201ENSMUST00000029838 CenpwQ3URR0 86 aa11.24□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Smim26Q3V460 107 aa11.24□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Sprr4Q8CGN8 76 aa11.24□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Ufsp1Q9CZP0 217 aa11.24□□□□□ -0.61
Rpf1-201ENSMUST00000029838 A730009L09RikA0A1B0GS82 72 aa11.23□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Eif4ebp3Q80VV3 101 aa11.23□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Vps25Q9CQ80 176 aa11.23□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Ube2d4D3YUH6 135 aa11.22□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Try10Q792Z1 246 aaKnown RBP11.22□□□□□ -0.61
Rpf1-201ENSMUST00000029838 2310061N02RikQ9D6S9 174 aa11.22□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Igkv1-117A0A140T8M0 119 aa11.21□□□□□ -0.61
Rpf1-201ENSMUST00000029838 Pxt1Q8K459 51 aa11.2□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Wfdc12Q9JHY3 85 aa11.2□□□□□ -0.62
Rpf1-201ENSMUST00000029838 FcgbpE9Q0B5 2583 aa11.2□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Lgals4Q8K419 326 aa11.2□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Gm16381A0A1Y7VKT9 73 aa11.19□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Gm5153P01627 120 aa11.19□□□□□ -0.62
Rpf1-201ENSMUST00000029838 P01819 144 aa11.19□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Igkv3-12A0A140T8P0 119 aa11.18□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Gm10735Q3US96 136 aa11.18□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Gm9508A0A1W2P7W0 230 aa11.17□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Gm10135F6TEE5 83 aa11.17□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Gm17577J3QNF7 156 aa11.17□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Cdk2ap2Q9CPY4 127 aa11.17□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Dnah17Q69Z23 4481 aa11.16□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Gm45213A0A0U1RNZ6 101 aa11.16□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Ociad2Q9D8W7 154 aa11.16□□□□□ -0.62
Rpf1-201ENSMUST00000029838 CnbpP53996 178 aaKnown RBP11.15□□□□□ -0.62
Rpf1-201ENSMUST00000029838 Defb29Q8BGW9 78 aa11.14□□□□□ -0.63
Rpf1-201ENSMUST00000029838 Gtf2h5Q8K2X8 71 aa11.14□□□□□ -0.63
Rpf1-201ENSMUST00000029838 A0A286YCN5 57 aa11.13□□□□□ -0.63
Rpf1-201ENSMUST00000029838 Gm11627A6PWP4 55 aa11.13□□□□□ -0.63
Rpf1-201ENSMUST00000029838 Defa16P50714 93 aa11.12□□□□□ -0.63
Rpf1-201ENSMUST00000029838 BC048502Q80Y74 154 aa11.12□□□□□ -0.63
Rpf1-201ENSMUST00000029838 AY074887Q8R5F9 132 aa11.12□□□□□ -0.63
Rpf1-201ENSMUST00000029838 Rpl18aP62717 176 aaKnown RBP11.11□□□□□ -0.63
Rpf1-201ENSMUST00000029838 Gm5142Q8C5X9 133 aa11.11□□□□□ -0.63
Rpf1-201ENSMUST00000029838 4930519P11RikQ9CUJ8 166 aa11.11□□□□□ -0.63
Rpf1-201ENSMUST00000029838 Trav3-4A0A075B654 114 aa11.11□□□□□ -0.63
Rpf1-201ENSMUST00000029838 Gm10845Q3UNY9 185 aa11.11□□□□□ -0.63
Rpf1-201ENSMUST00000029838 BaalcQ8VHV1 145 aa11.11□□□□□ -0.63
Rpf1-201ENSMUST00000029838 Mrpl52Q9D0Y8 121 aa11.11□□□□□ -0.63
Rpf1-201ENSMUST00000029838 Sprr1aQ62266 144 aa11.1□□□□□ -0.63
Rpf1-201ENSMUST00000029838 Acyp1P56376 99 aa11.09□□□□□ -0.63
Rpf1-201ENSMUST00000029838 Defa1P11477 93 aa11.08□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Spata45Q9CVW4 97 aa11.08□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Trav13n-2A0A0G2JF93 110 aa11.08□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Gm9805F6YK59 57 aa11.08□□□□□ -0.64
Rpf1-201ENSMUST00000029838 1700020N15RikL7MTX3 112 aa11.08□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Igkv3-2A0A075B5P0 119 aa11.07□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Defa20Q45VN2 95 aa11.06□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Nupr2Q497P3 102 aa11.06□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Stab2Q8R4U0 2559 aa11.06□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Pkd1l1Q8R526 2615 aa11.05□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Igkv1-88A0A140T8N1 120 aa11.04□□□□□ -0.64
Rpf1-201ENSMUST00000029838 PkigO70139 76 aa11.04□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Defb40Q70KL2 73 aa11.04□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Xlr5cQ9JJR2 179 aa11.04□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Ighv10-1A0A0B4J1J6 119 aa11.03□□□□□ -0.64
Rpf1-201ENSMUST00000029838 BB014433Q8C5R5 389 aa11.03□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Igkv1-35A0A0G2JDE5 120 aa11.02□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Fam240bJ3QMB3 78 aa11.02□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Pou2af1Q64693 256 aa11.02□□□□□ -0.64
Rpf1-201ENSMUST00000029838 4930524J08RikQ9CUJ5 163 aa11.02□□□□□ -0.64
Rpf1-201ENSMUST00000029838 Wfdc6bF6ULY1 148 aa11.01□□□□□ -0.65
Rpf1-201ENSMUST00000029838 Gm10770F7D043 238 aa11.01□□□□□ -0.65
Rpf1-201ENSMUST00000029838 Rpl39lQ9CQD0 51 aa11.01□□□□□ -0.65
Rpf1-201ENSMUST00000029838 Dnah1E9Q8T7 4250 aa11□□□□□ -0.65
Rpf1-201ENSMUST00000029838 Obox2E9PXV9 151 aa11□□□□□ -0.65
Rpf1-201ENSMUST00000029838 Huwe1Q7TMY8 4377 aaKnown RBP10.99□□□□□ -0.65
Rpf1-201ENSMUST00000029838 Klk12B2RVZ0 247 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 61.5 ms