RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Gm16381A0A1Y7VKT9 73 aa11.26□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Gm10647E9Q8X0 124 aa11.26□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Ndufa12Q7TMF3 145 aaKnown RBP11.26□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Tcl1b3P56842 122 aa11.25□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Utp20Q5XG71 2788 aaKnown RBP11.24□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Scgb1b2O35176 93 aa11.24□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Tmem223Q9CQE2 199 aaKnown RBP11.24□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 4930544G11RikQ9CR99 193 aa11.24□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Cox7a1P56392 80 aa11.23□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Cd99Q8VCN6 175 aa11.23□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Usp9yF8VPU6 2556 aa11.23□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 P01755 137 aa11.23□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Smim26Q3V460 107 aa11.23□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 CdsnQ7TPC1 561 aa11.23□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Celsr2Q9R0M0 2920 aa11.23□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Rpl35aO55142 110 aa11.22□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Odf3l2Q3TZ65 277 aa11.22□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Apoc4Q61268 124 aa11.21□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Mapk1ip1lQ8BH93 242 aa11.21□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Mzt1Q8BUR9 78 aa11.21□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 MtorQ9JLN9 2549 aa11.2□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Hist1h4aP62806 103 aaKnown RBP11.2□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Trav13d-4A0A0G2JFX3 110 aa11.19□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Igkv1-99F6XWB2 120 aa11.19□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 PkigO70139 76 aa11.19□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 4930519P11RikQ9CUJ8 166 aa11.19□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Smim20D3Z7Q2 69 aa11.19□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Ntn5Q3UQ22 452 aa11.19□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Prss58Q8BW11 241 aa11.19□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Pla2g1bQ9Z0Y2 146 aa11.19□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Notch2O35516 2470 aa11.18□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Trav3-4A0A075B654 114 aa11.18□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Defb2P82020 71 aa11.18□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Pfn2Q9JJV2 140 aa11.18□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 1810062G17RikG3X8Y2 129 aa11.17□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Klk9Q32M27 251 aa11.17□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Csdc2Q91YQ3 154 aa11.17□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Sh2d1aO88890 126 aa11.16□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 CicQ924A2 2510 aa11.16□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Igkv4-61A0A0G2JH00 117 aa11.16□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Defb26Q30KN7 186 aa11.16□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Prp2P05143 317 aa11.15□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Ly6c2P0CW03 131 aa11.15□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 Notch3Q61982 2318 aa11.15□□□□□ -0.62
Ttc39b-202ENSMUST00000048274 BC067074F6RXI4 2391 aa11.15□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Igkv1-35A0A0G2JDE5 120 aa11.14□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Igkv4-53A0A0G2JFC6 119 aa11.14□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Defb29Q8BGW9 78 aa11.14□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Dnal4Q9DCM4 105 aa11.14□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 B230359F08RikA0A0B4J1K3 109 aa11.14□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Gm5142Q8C5X9 133 aa11.14□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Nav3Q80TN7 2359 aa11.14□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Chd9Q8BYH8 2885 aa11.14□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Ifitm6A0A1B0GS75 124 aa11.13□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Ankrd17Q99NH0 2603 aaKnown RBP11.12□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 P01819 144 aa11.12□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 A830031A19RikQ8BNT5 113 aa11.12□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Igf1P05017 153 aa11.12□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Tomm7Q9D173 55 aa11.12□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Gm5153P01627 120 aa11.11□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Tcl1b5P56845 121 aa11.11□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Igkv8-18A0A0B4J1J3 123 aa11.1□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Defa1P11477 93 aa11.1□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 CnbpP53996 178 aaKnown RBP11.1□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Gm10845Q3UNY9 185 aa11.09□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Ighv1-59A0A0A6YXE0 117 aa11.09□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Igkv6-13A0A0G2JGY3 119 aa11.09□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Krtap10-10A0A1W2P7T6 217 aa11.09□□□□□ -0.63
Ttc39b-202ENSMUST00000048274 Ighv8-11A0A075B5X4 119 aa11.08□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Hbb-b2P02089 147 aa11.08□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Defa25Q5G864 92 aa11.08□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Muc4Q8JZM8 3443 aa11.08□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Ighv2-9A0A075B5Q5 116 aa11.07□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Gm7257D3YX25 99 aa11.07□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Cmc4Q61908 68 aa11.07□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Klk11Q9QYN3 276 aa11.07□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 AtrQ9JKK8 2635 aa11.06□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Rpl18aP62717 176 aaKnown RBP11.06□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Gm9903Q8C9Y8 129 aa11.06□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Ank2Q8C8R3 3898 aa11.05□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Trav13-1A0A075B644 110 aa11.05□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Igkv4-54A0A0G2JES9 117 aa11.05□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 C530025M09RikF6RGA8 229 aa11.05□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Defa16P50714 93 aa11.05□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Rpl39lQ9CQD0 51 aa11.05□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Ighv10-3A0A075B5T6 119 aa11.05□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Inafm2A0A1L1STD6 152 aa11.05□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Igsf10Q3V1M1 2594 aa11.04□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Trav13n-2A0A0G2JF93 110 aa11.04□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 ScxQ64124 207 aa11.04□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 4930556J24RikQ9D4U7 146 aa11.04□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Gm9767G3X930 207 aa11.03□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 7530416G11RikJ3QJX6 159 aa11.03□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Tmem254aP0DN89 123 aa11.03□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Tmem254bP0DN90 123 aa11.03□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Tmem254cP0DN91 123 aa11.03□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Cox7bP56393 80 aa11.03□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Tmem86bQ497J1 226 aa11.03□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Dand5Q76LW6 185 aa11.02□□□□□ -0.64
Ttc39b-202ENSMUST00000048274 Bles03Q8VD62 251 aa11.02□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms