Protein–RNA interactions for Protein: P0CW03

Ly6c2, Lymphocyte antigen 6C2, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c2P0CW03 Gm25239-201ENSMUST00000174915 86 ntBASIC28.98■■■□□ 2.23
Ly6c2P0CW03 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ly6c2P0CW03 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ly6c2P0CW03 Gm15042-201ENSMUST00000120212 883 ntBASIC25.33■■□□□ 1.65
Ly6c2P0CW03 Gm24109-201ENSMUST00000175489 103 ntBASIC25.1■■□□□ 1.61
Ly6c2P0CW03 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ly6c2P0CW03 Gm15045-201ENSMUST00000117359 883 ntBASIC24.74■■□□□ 1.55
Ly6c2P0CW03 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ly6c2P0CW03 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ly6c2P0CW03 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ly6c2P0CW03 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ly6c2P0CW03 Gm23366-201ENSMUST00000175022 89 ntBASIC24.2■■□□□ 1.46
Ly6c2P0CW03 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ly6c2P0CW03 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Ly6c2P0CW03 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ly6c2P0CW03 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ly6c2P0CW03 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.42■■□□□ 1.34
Ly6c2P0CW03 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.38■■□□□ 1.33
Ly6c2P0CW03 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Ly6c2P0CW03 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ly6c2P0CW03 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.27■■□□□ 1.32
Ly6c2P0CW03 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ly6c2P0CW03 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
Ly6c2P0CW03 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ly6c2P0CW03 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ly6c2P0CW03 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ly6c2P0CW03 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ly6c2P0CW03 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ly6c2P0CW03 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ly6c2P0CW03 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ly6c2P0CW03 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ly6c2P0CW03 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.87■■□□□ 1.25
Ly6c2P0CW03 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.87■■□□□ 1.25
Ly6c2P0CW03 Gm25238-201ENSMUST00000174914 89 ntBASIC22.86■■□□□ 1.25
Ly6c2P0CW03 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ly6c2P0CW03 Psd-208ENSMUST00000224556 2034 ntBASIC22.77■■□□□ 1.24
Ly6c2P0CW03 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ly6c2P0CW03 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.47■■□□□ 1.19
Ly6c2P0CW03 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
Ly6c2P0CW03 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ly6c2P0CW03 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.31■■□□□ 1.16
Ly6c2P0CW03 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ly6c2P0CW03 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ly6c2P0CW03 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ly6c2P0CW03 Gm27325-201ENSMUST00000175467 74 ntBASIC22.18■■□□□ 1.14
Ly6c2P0CW03 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ly6c2P0CW03 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ly6c2P0CW03 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.14■■□□□ 1.13
Ly6c2P0CW03 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Ly6c2P0CW03 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.06■■□□□ 1.12
Ly6c2P0CW03 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.05■■□□□ 1.12
Ly6c2P0CW03 Gm25262-201ENSMUST00000174934 133 ntBASIC21.92■■□□□ 1.1
Ly6c2P0CW03 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ly6c2P0CW03 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ly6c2P0CW03 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.9■■□□□ 1.1
Ly6c2P0CW03 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.87■■□□□ 1.09
Ly6c2P0CW03 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ly6c2P0CW03 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ly6c2P0CW03 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ly6c2P0CW03 Rab21-202ENSMUST00000218831 843 ntBASIC21.79■■□□□ 1.08
Ly6c2P0CW03 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.74■■□□□ 1.07
Ly6c2P0CW03 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ly6c2P0CW03 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ly6c2P0CW03 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Ly6c2P0CW03 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ly6c2P0CW03 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ly6c2P0CW03 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ly6c2P0CW03 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.53■■□□□ 1.04
Ly6c2P0CW03 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.52■■□□□ 1.04
Ly6c2P0CW03 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ly6c2P0CW03 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.51■■□□□ 1.03
Ly6c2P0CW03 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ly6c2P0CW03 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ly6c2P0CW03 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ly6c2P0CW03 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ly6c2P0CW03 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.48■■□□□ 1.03
Ly6c2P0CW03 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ly6c2P0CW03 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ly6c2P0CW03 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ly6c2P0CW03 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ly6c2P0CW03 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.42■■□□□ 1.02
Ly6c2P0CW03 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ly6c2P0CW03 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ly6c2P0CW03 Gm26115-201ENSMUST00000175605 87 ntBASIC21.37■■□□□ 1.01
Ly6c2P0CW03 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ly6c2P0CW03 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ly6c2P0CW03 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ly6c2P0CW03 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ly6c2P0CW03 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ly6c2P0CW03 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.27■■□□□ 1
Ly6c2P0CW03 Gm8109-201ENSMUST00000194076 746 ntBASIC21.26■□□□□ 0.99
Ly6c2P0CW03 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ly6c2P0CW03 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ly6c2P0CW03 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.23■□□□□ 0.99
Ly6c2P0CW03 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.22■□□□□ 0.99
Ly6c2P0CW03 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.19■□□□□ 0.98
Ly6c2P0CW03 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.18■□□□□ 0.98
Ly6c2P0CW03 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ly6c2P0CW03 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ly6c2P0CW03 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms