Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm25239-201ENSMUST00000174915 86 ntBASIC32.33■■■□□ 2.77
Chd9Q8BYH8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Chd9Q8BYH8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Chd9Q8BYH8 Gm24109-201ENSMUST00000175489 103 ntBASIC28.78■■■□□ 2.2
Chd9Q8BYH8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Chd9Q8BYH8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Chd9Q8BYH8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Chd9Q8BYH8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Chd9Q8BYH8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.06■■□□□ 1.92
Chd9Q8BYH8 Gm15042-201ENSMUST00000120212 883 ntBASIC27.02■■□□□ 1.92
Chd9Q8BYH8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Chd9Q8BYH8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Chd9Q8BYH8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.76■■□□□ 1.87
Chd9Q8BYH8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.71■■□□□ 1.87
Chd9Q8BYH8 Gm23366-201ENSMUST00000175022 89 ntBASIC26.63■■□□□ 1.85
Chd9Q8BYH8 Gm15045-201ENSMUST00000117359 883 ntBASIC26.41■■□□□ 1.82
Chd9Q8BYH8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.14■■□□□ 1.77
Chd9Q8BYH8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Chd9Q8BYH8 Gm25238-201ENSMUST00000174914 89 ntBASIC25.97■■□□□ 1.75
Chd9Q8BYH8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.74■■□□□ 1.71
Chd9Q8BYH8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Chd9Q8BYH8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Chd9Q8BYH8 Gm25262-201ENSMUST00000174934 133 ntBASIC25.46■■□□□ 1.67
Chd9Q8BYH8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Chd9Q8BYH8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Chd9Q8BYH8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.63
Chd9Q8BYH8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Chd9Q8BYH8 Gm26115-201ENSMUST00000175605 87 ntBASIC25.16■■□□□ 1.62
Chd9Q8BYH8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Chd9Q8BYH8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Chd9Q8BYH8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.03■■□□□ 1.6
Chd9Q8BYH8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.02■■□□□ 1.6
Chd9Q8BYH8 Gm8109-201ENSMUST00000194076 746 ntBASIC24.89■■□□□ 1.57
Chd9Q8BYH8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.85■■□□□ 1.57
Chd9Q8BYH8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.79■■□□□ 1.56
Chd9Q8BYH8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Chd9Q8BYH8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Chd9Q8BYH8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Chd9Q8BYH8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Chd9Q8BYH8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.34■■□□□ 1.49
Chd9Q8BYH8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Chd9Q8BYH8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.28■■□□□ 1.48
Chd9Q8BYH8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.27■■□□□ 1.48
Chd9Q8BYH8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Chd9Q8BYH8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.14■■□□□ 1.45
Chd9Q8BYH8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chd9Q8BYH8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Chd9Q8BYH8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Chd9Q8BYH8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Chd9Q8BYH8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.06■■□□□ 1.44
Chd9Q8BYH8 Gm24804-201ENSMUST00000174982 85 ntBASIC24.01■■□□□ 1.43
Chd9Q8BYH8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chd9Q8BYH8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Chd9Q8BYH8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.96■■□□□ 1.43
Chd9Q8BYH8 Rab21-202ENSMUST00000218831 843 ntBASIC23.89■■□□□ 1.41
Chd9Q8BYH8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chd9Q8BYH8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chd9Q8BYH8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd9Q8BYH8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.83■■□□□ 1.41
Chd9Q8BYH8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.82■■□□□ 1.4
Chd9Q8BYH8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Chd9Q8BYH8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd9Q8BYH8 Zfp131-205ENSMUST00000223812 663 ntBASIC23.73■■□□□ 1.39
Chd9Q8BYH8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chd9Q8BYH8 Gm27325-201ENSMUST00000175467 74 ntBASIC23.69■■□□□ 1.38
Chd9Q8BYH8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Chd9Q8BYH8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.65■■□□□ 1.38
Chd9Q8BYH8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Chd9Q8BYH8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Chd9Q8BYH8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.59■■□□□ 1.37
Chd9Q8BYH8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.58■■□□□ 1.37
Chd9Q8BYH8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Chd9Q8BYH8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Chd9Q8BYH8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Chd9Q8BYH8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chd9Q8BYH8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Chd9Q8BYH8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.38■■□□□ 1.33
Chd9Q8BYH8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chd9Q8BYH8 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.34■■□□□ 1.33
Chd9Q8BYH8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Chd9Q8BYH8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.31■■□□□ 1.32
Chd9Q8BYH8 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.29■■□□□ 1.32
Chd9Q8BYH8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Chd9Q8BYH8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd9Q8BYH8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.13■■□□□ 1.29
Chd9Q8BYH8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.13■■□□□ 1.29
Chd9Q8BYH8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd9Q8BYH8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Chd9Q8BYH8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Chd9Q8BYH8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.04■■□□□ 1.28
Chd9Q8BYH8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Chd9Q8BYH8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Chd9Q8BYH8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.02■■□□□ 1.28
Chd9Q8BYH8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.02■■□□□ 1.28
Chd9Q8BYH8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chd9Q8BYH8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.99■■□□□ 1.27
Chd9Q8BYH8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chd9Q8BYH8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.97■■□□□ 1.27
Chd9Q8BYH8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Chd9Q8BYH8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms