Protein–RNA interactions for Protein: Q8VCN6

Cd99, CD99 antigen, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd99Q8VCN6 Gm25239-201ENSMUST00000174915 86 ntBASIC30.54■■■□□ 2.48
Cd99Q8VCN6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Cd99Q8VCN6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Cd99Q8VCN6 Gm15042-201ENSMUST00000120212 883 ntBASIC26.54■■□□□ 1.84
Cd99Q8VCN6 Gm24109-201ENSMUST00000175489 103 ntBASIC26.53■■□□□ 1.84
Cd99Q8VCN6 Gm15045-201ENSMUST00000117359 883 ntBASIC25.93■■□□□ 1.74
Cd99Q8VCN6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cd99Q8VCN6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cd99Q8VCN6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Cd99Q8VCN6 Gm23366-201ENSMUST00000175022 89 ntBASIC25.48■■□□□ 1.67
Cd99Q8VCN6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cd99Q8VCN6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cd99Q8VCN6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Cd99Q8VCN6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.79■■□□□ 1.56
Cd99Q8VCN6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cd99Q8VCN6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.6■■□□□ 1.53
Cd99Q8VCN6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
Cd99Q8VCN6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Cd99Q8VCN6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Cd99Q8VCN6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cd99Q8VCN6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cd99Q8VCN6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cd99Q8VCN6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cd99Q8VCN6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cd99Q8VCN6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.18■■□□□ 1.46
Cd99Q8VCN6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cd99Q8VCN6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.15■■□□□ 1.46
Cd99Q8VCN6 Gm25238-201ENSMUST00000174914 89 ntBASIC24.15■■□□□ 1.46
Cd99Q8VCN6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cd99Q8VCN6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cd99Q8VCN6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cd99Q8VCN6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cd99Q8VCN6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.73■■□□□ 1.39
Cd99Q8VCN6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Cd99Q8VCN6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cd99Q8VCN6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Cd99Q8VCN6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cd99Q8VCN6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.46■■□□□ 1.35
Cd99Q8VCN6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cd99Q8VCN6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
Cd99Q8VCN6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cd99Q8VCN6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.37■■□□□ 1.33
Cd99Q8VCN6 Gm27325-201ENSMUST00000175467 74 ntBASIC23.23■■□□□ 1.31
Cd99Q8VCN6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.22■■□□□ 1.31
Cd99Q8VCN6 Gm25262-201ENSMUST00000174934 133 ntBASIC23.2■■□□□ 1.3
Cd99Q8VCN6 Psd-208ENSMUST00000224556 2034 ntBASIC23.18■■□□□ 1.3
Cd99Q8VCN6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.18■■□□□ 1.3
Cd99Q8VCN6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cd99Q8VCN6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cd99Q8VCN6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cd99Q8VCN6 Rab21-202ENSMUST00000218831 843 ntBASIC22.91■■□□□ 1.26
Cd99Q8VCN6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.86■■□□□ 1.25
Cd99Q8VCN6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.85■■□□□ 1.25
Cd99Q8VCN6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cd99Q8VCN6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.79■■□□□ 1.24
Cd99Q8VCN6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.79■■□□□ 1.24
Cd99Q8VCN6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.78■■□□□ 1.24
Cd99Q8VCN6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Cd99Q8VCN6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cd99Q8VCN6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cd99Q8VCN6 Gm26115-201ENSMUST00000175605 87 ntBASIC22.68■■□□□ 1.22
Cd99Q8VCN6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.64■■□□□ 1.22
Cd99Q8VCN6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cd99Q8VCN6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cd99Q8VCN6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.61■■□□□ 1.21
Cd99Q8VCN6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Cd99Q8VCN6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cd99Q8VCN6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cd99Q8VCN6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cd99Q8VCN6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cd99Q8VCN6 Gm8109-201ENSMUST00000194076 746 ntBASIC22.55■■□□□ 1.2
Cd99Q8VCN6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
Cd99Q8VCN6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.49■■□□□ 1.19
Cd99Q8VCN6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
Cd99Q8VCN6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cd99Q8VCN6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cd99Q8VCN6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cd99Q8VCN6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.38■■□□□ 1.17
Cd99Q8VCN6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cd99Q8VCN6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cd99Q8VCN6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Cd99Q8VCN6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd99Q8VCN6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cd99Q8VCN6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Cd99Q8VCN6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd99Q8VCN6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.22■■□□□ 1.15
Cd99Q8VCN6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cd99Q8VCN6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cd99Q8VCN6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cd99Q8VCN6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.12■■□□□ 1.13
Cd99Q8VCN6 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.12■■□□□ 1.13
Cd99Q8VCN6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cd99Q8VCN6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.08■■□□□ 1.12
Cd99Q8VCN6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Cd99Q8VCN6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cd99Q8VCN6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cd99Q8VCN6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cd99Q8VCN6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cd99Q8VCN6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cd99Q8VCN6 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms