RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 NischQ80TM9 1593 aa30.7■■■□□ 2.5
Ttc39b-202ENSMUST00000048274 Gm35339A0A140LHH9 1649 aa30.35■■■□□ 2.45
Ttc39b-202ENSMUST00000048274 Abcc9P70170 1546 aa29.96■■■□□ 2.39
Ttc39b-202ENSMUST00000048274 Abcc8B2RUS7 1588 aa29.15■■■□□ 2.26
Ttc39b-202ENSMUST00000048274 Rtl1Q7M732 1744 aa28.9■■■□□ 2.22
Ttc39b-202ENSMUST00000048274 Ccdc180J3QNE4 1664 aa28.31■■■□□ 2.12
Ttc39b-202ENSMUST00000048274 Rhox8Q6VSS7 320 aa28.27■■■□□ 2.12
Ttc39b-202ENSMUST00000048274 Zcchc6Q5BLK4 1491 aaKnown RBP27.62■■■□□ 2.01
Ttc39b-202ENSMUST00000048274 Dcaf1Q80TR8 1506 aa27.49■■□□□ 1.99
Ttc39b-202ENSMUST00000048274 Rpgrip1Q9EPQ2 1331 aa27.25■■□□□ 1.95
Ttc39b-202ENSMUST00000048274 ScribQ80U72 1612 aa26.97■■□□□ 1.91
Ttc39b-202ENSMUST00000048274 Rb1cc1Q9ESK9 1588 aa26.91■■□□□ 1.9
Ttc39b-202ENSMUST00000048274 HrcG5E8J6 738 aa26.84■■□□□ 1.89
Ttc39b-202ENSMUST00000048274 Baz1aO88379 1555 aa26.71■■□□□ 1.87
Ttc39b-202ENSMUST00000048274 Acin1Q9JIX8 1338 aaKnown RBP26.55■■□□□ 1.84
Ttc39b-202ENSMUST00000048274 Kdm5dQ62240 1548 aa26.51■■□□□ 1.83
Ttc39b-202ENSMUST00000048274 Crybg2B7ZCC2 1516 aa26.34■■□□□ 1.81
Ttc39b-202ENSMUST00000048274 NacadQ5SWP3 1504 aa26.34■■□□□ 1.81
Ttc39b-202ENSMUST00000048274 Smarca2Q6DIC0 1577 aa26.16■■□□□ 1.78
Ttc39b-202ENSMUST00000048274 Ccdc136Q3TVA9 1136 aa26.15■■□□□ 1.78
Ttc39b-202ENSMUST00000048274 Cep164Q5DU05 1446 aa25.94■■□□□ 1.74
Ttc39b-202ENSMUST00000048274 Trim41Q5NCC3 630 aa25.91■■□□□ 1.74
Ttc39b-202ENSMUST00000048274 Sycp2Q9CUU3 1500 aa25.75■■□□□ 1.71
Ttc39b-202ENSMUST00000048274 Ehmt2Q9Z148 1263 aaKnown RBP25.7■■□□□ 1.7
Ttc39b-202ENSMUST00000048274 Brd4Q9ESU6 1400 aaKnown RBP25.46■■□□□ 1.67
Ttc39b-202ENSMUST00000048274 Pcgf6Q99NA9 353 aa25.45■■□□□ 1.66
Ttc39b-202ENSMUST00000048274 Rsf1E9PWW9 1441 aaKnown RBP25.35■■□□□ 1.65
Ttc39b-202ENSMUST00000048274 Golga3P55937 1487 aa25.3■■□□□ 1.64
Ttc39b-202ENSMUST00000048274 Cecr2E9Q2Z1 1453 aa25.21■■□□□ 1.63
Ttc39b-202ENSMUST00000048274 Synj1Q8CHC4 1574 aa25.17■■□□□ 1.62
Ttc39b-202ENSMUST00000048274 Dnajc5bQ9CQ94 199 aa25.16■■□□□ 1.62
Ttc39b-202ENSMUST00000048274 Chic1Q8CBW7 227 aa25.14■■□□□ 1.62
Ttc39b-202ENSMUST00000048274 Ccdc88bQ4QRL3 1481 aa25.12■■□□□ 1.61
Ttc39b-202ENSMUST00000048274 BicraF8VPZ9 1578 aa25.08■■□□□ 1.61
Ttc39b-202ENSMUST00000048274 Top2bQ64511 1612 aa25.07■■□□□ 1.6
Ttc39b-202ENSMUST00000048274 Cngb1E1AZ71 1325 aa25.02■■□□□ 1.6
Ttc39b-202ENSMUST00000048274 CftrP26361 1476 aa25.01■■□□□ 1.59
Ttc39b-202ENSMUST00000048274 Cttnbp2B9EJA2 1648 aa24.94■■□□□ 1.58
Ttc39b-202ENSMUST00000048274 NefmP08553 848 aa24.91■■□□□ 1.58
Ttc39b-202ENSMUST00000048274 Supt5hO55201 1082 aaKnown RBP24.9■■□□□ 1.58
Ttc39b-202ENSMUST00000048274 Gab3Q8BSM5 595 aa24.79■■□□□ 1.56
Ttc39b-202ENSMUST00000048274 Smarca4Q3TKT4 1613 aaKnown RBP24.69■■□□□ 1.54
Ttc39b-202ENSMUST00000048274 Mier1Q5UAK0 511 aa24.68■■□□□ 1.54
Ttc39b-202ENSMUST00000048274 Rapgef2Q8CHG7 1496 aa24.67■■□□□ 1.54
Ttc39b-202ENSMUST00000048274 Cc2d2aQ8CFW7 1633 aa24.63■■□□□ 1.53
Ttc39b-202ENSMUST00000048274 Fmn1Q05860 1466 aa24.61■■□□□ 1.53
Ttc39b-202ENSMUST00000048274 Top2aQ01320 1528 aaKnown RBP24.57■■□□□ 1.52
Ttc39b-202ENSMUST00000048274 Esf1Q3V1V3 845 aaKnown RBP24.53■■□□□ 1.52
Ttc39b-202ENSMUST00000048274 Thoc2B1AZI6 1594 aaKnown RBP24.41■■□□□ 1.5
Ttc39b-202ENSMUST00000048274 Neurod1Q60867 357 aa24.37■■□□□ 1.49
Ttc39b-202ENSMUST00000048274 Zeb1Q64318 1117 aa24.37■■□□□ 1.49
Ttc39b-202ENSMUST00000048274 Cep162Q6ZQ06 1403 aa24.37■■□□□ 1.49
Ttc39b-202ENSMUST00000048274 Eif4g1Q6NZJ6 1600 aaKnown RBP24.33■■□□□ 1.49
Ttc39b-202ENSMUST00000048274 Pds5bQ4VA53 1446 aaKnown RBP24.29■■□□□ 1.48
Ttc39b-202ENSMUST00000048274 Sall2Q9QX96 1004 aa24.28■■□□□ 1.48
Ttc39b-202ENSMUST00000048274 Iqgap2Q3UQ44 1575 aa24.27■■□□□ 1.48
Ttc39b-202ENSMUST00000048274 TnnQ80Z71 1560 aa24.21■■□□□ 1.47
Ttc39b-202ENSMUST00000048274 Atad2bE9Q166 1460 aaKnown RBP24.11■■□□□ 1.45
Ttc39b-202ENSMUST00000048274 Las1lA2BE28 776 aaKnown RBP24.08■■□□□ 1.45
Ttc39b-202ENSMUST00000048274 UbtfP25976 765 aaKnown RBP24.07■■□□□ 1.44
Ttc39b-202ENSMUST00000048274 Anks4bQ8K3X6 423 aa24.05■■□□□ 1.44
Ttc39b-202ENSMUST00000048274 Ncapd3Q6ZQK0 1506 aa23.99■■□□□ 1.43
Ttc39b-202ENSMUST00000048274 ClspnQ80YR7 1315 aa23.97■■□□□ 1.43
Ttc39b-202ENSMUST00000048274 Clip1Q922J3 1391 aa23.95■■□□□ 1.42
Ttc39b-202ENSMUST00000048274 NrkQ9R0G8 1455 aa23.93■■□□□ 1.42
Ttc39b-202ENSMUST00000048274 Arhgap35Q91YM2 1499 aa23.89■■□□□ 1.41
Ttc39b-202ENSMUST00000048274 Aebp2Q9Z248 504 aaKnown RBP23.89■■□□□ 1.41
Ttc39b-202ENSMUST00000048274 Lamc3Q9R0B6 1581 aa23.86■■□□□ 1.41
Ttc39b-202ENSMUST00000048274 Myt1lP97500 1187 aa23.83■■□□□ 1.41
Ttc39b-202ENSMUST00000048274 Ccdc18Q640L5 1455 aa23.83■■□□□ 1.41
Ttc39b-202ENSMUST00000048274 Npm2Q80W85 207 aa23.81■■□□□ 1.4
Ttc39b-202ENSMUST00000048274 TonslQ6NZL6 1363 aa23.81■■□□□ 1.4
Ttc39b-202ENSMUST00000048274 Map3k1P53349 1493 aa23.8■■□□□ 1.4
Ttc39b-202ENSMUST00000048274 Wdr62Q3U3T8 1523 aa23.77■■□□□ 1.4
Ttc39b-202ENSMUST00000048274 Wdr66E9Q743 1299 aa23.76■■□□□ 1.39
Ttc39b-202ENSMUST00000048274 Ercc6F8VPZ5 1481 aa23.76■■□□□ 1.39
Ttc39b-202ENSMUST00000048274 Kdm5bQ80Y84 1544 aa23.74■■□□□ 1.39
Ttc39b-202ENSMUST00000048274 Eea1Q8BL66 1411 aa23.73■■□□□ 1.39
Ttc39b-202ENSMUST00000048274 Frmpd1A2AKB4 1549 aa23.73■■□□□ 1.39
Ttc39b-202ENSMUST00000048274 Arhgef5E9Q7D5 1581 aa23.73■■□□□ 1.39
Ttc39b-202ENSMUST00000048274 Arap1Q4LDD4 1452 aa23.73■■□□□ 1.39
Ttc39b-202ENSMUST00000048274 Shroom4Q1W617 1475 aa23.72■■□□□ 1.39
Ttc39b-202ENSMUST00000048274 PtprkP35822 1457 aa23.71■■□□□ 1.39
Ttc39b-202ENSMUST00000048274 Cdk11bP24788 784 aaKnown RBP23.7■■□□□ 1.38
Ttc39b-202ENSMUST00000048274 Fam135aQ6NS59 1506 aa23.7■■□□□ 1.38
Ttc39b-202ENSMUST00000048274 TchhA0A0B4J1F9 1599 aa23.69■■□□□ 1.38
Ttc39b-202ENSMUST00000048274 Camsap1A2AHC3 1581 aa23.67■■□□□ 1.38
Ttc39b-202ENSMUST00000048274 Nop58Q6DFW4 536 aaKnown RBP23.66■■□□□ 1.38
Ttc39b-202ENSMUST00000048274 Plekhg3Q4VAC9 1341 aa23.64■■□□□ 1.37
Ttc39b-202ENSMUST00000048274 Erich3F6QRE9 1637 aa23.61■■□□□ 1.37
Ttc39b-202ENSMUST00000048274 Tiam1Q60610 1591 aa23.59■■□□□ 1.37
Ttc39b-202ENSMUST00000048274 Unc13aQ4KUS2 1712 aa23.55■■□□□ 1.36
Ttc39b-202ENSMUST00000048274 AqrQ8CFQ3 1481 aaKnown RBP23.55■■□□□ 1.36
Ttc39b-202ENSMUST00000048274 1700123L14RikQ3V2K7 440 aa23.53■■□□□ 1.36
Ttc39b-202ENSMUST00000048274 Setd5Q5XJV7 1441 aa23.51■■□□□ 1.35
Ttc39b-202ENSMUST00000048274 Dnajc5P60904 198 aa23.49■■□□□ 1.35
Ttc39b-202ENSMUST00000048274 Aplp2Q06335 707 aa23.49■■□□□ 1.35
Ttc39b-202ENSMUST00000048274 Mroh2bQ7M6Y6 1581 aa23.49■■□□□ 1.35
Ttc39b-202ENSMUST00000048274 Csrnp3P59055 597 aa23.49■■□□□ 1.35
Ttc39b-202ENSMUST00000048274 Grin2bQ01097 1482 aa23.48■■□□□ 1.35
Retrieved 100 of 22,080 RNA–protein pairs in 93.5 ms