RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 B230217C12RikE9Q3Z1 139 aa8.23□□□□□ -1.09
Trim9-202ENSMUST00000110522 Reg3bP35230 175 aa8.23□□□□□ -1.09
Trim9-202ENSMUST00000110522 Cox11Q6P8I6 275 aa8.23□□□□□ -1.09
Trim9-202ENSMUST00000110522 Gm4861Q8C5A4 106 aa8.23□□□□□ -1.09
Trim9-202ENSMUST00000110522 Sfta2E9PXB6 77 aa8.23□□□□□ -1.09
Trim9-202ENSMUST00000110522 Smim26Q3V460 107 aa8.23□□□□□ -1.09
Trim9-202ENSMUST00000110522 Rbmy1bQ60990 380 aa8.23□□□□□ -1.09
Trim9-202ENSMUST00000110522 Mfap4Q9D1H9 257 aa8.23□□□□□ -1.09
Trim9-202ENSMUST00000110522 Znhit3Q9CQK1 151 aa8.23□□□□□ -1.09
Trim9-202ENSMUST00000110522 MplkipQ9D011 178 aa8.23□□□□□ -1.09
Trim9-202ENSMUST00000110522 CtrlQ9ER05 264 aa8.23□□□□□ -1.09
Trim9-202ENSMUST00000110522 Fgfbp3Q1HCM0 245 aa8.22□□□□□ -1.09
Trim9-202ENSMUST00000110522 PemtQ61907 199 aa8.22□□□□□ -1.09
Trim9-202ENSMUST00000110522 Gm3250E9Q1M3 230 aa8.22□□□□□ -1.09
Trim9-202ENSMUST00000110522 Trav3-4A0A075B654 114 aa8.22□□□□□ -1.09
Trim9-202ENSMUST00000110522 Igkv4-79A0A075B5L8 119 aa8.21□□□□□ -1.09
Trim9-202ENSMUST00000110522 Igkv4-69A0A0B4J1I6 116 aa8.21□□□□□ -1.09
Trim9-202ENSMUST00000110522 Xcl1P47993 114 aa8.21□□□□□ -1.09
Trim9-202ENSMUST00000110522 Igkv4-54A0A0G2JES9 117 aa8.21□□□□□ -1.09
Trim9-202ENSMUST00000110522 FshbQ60687 130 aa8.21□□□□□ -1.09
Trim9-202ENSMUST00000110522 Defb42Q8BVB5 75 aa8.21□□□□□ -1.09
Trim9-202ENSMUST00000110522 Celsr1O35161 3034 aa8.21□□□□□ -1.1
Trim9-202ENSMUST00000110522 Smrp1Q2MH31 260 aa8.21□□□□□ -1.1
Trim9-202ENSMUST00000110522 Gm10300Q8C8P7 189 aa8.21□□□□□ -1.1
Trim9-202ENSMUST00000110522 Zc2hc1bQ9D534 172 aa8.21□□□□□ -1.1
Trim9-202ENSMUST00000110522 Trav4d-3A0A075B625 110 aa8.2□□□□□ -1.1
Trim9-202ENSMUST00000110522 Igkv1-35A0A0G2JDE5 120 aa8.2□□□□□ -1.1
Trim9-202ENSMUST00000110522 Sigmar1O55242 223 aa8.2□□□□□ -1.1
Trim9-202ENSMUST00000110522 1700010B08RikQ9DAI7 102 aa8.2□□□□□ -1.1
Trim9-202ENSMUST00000110522 FasnP19096 2504 aaKnown RBP8.2□□□□□ -1.1
Trim9-202ENSMUST00000110522 Dmxl2Q8BPN8 3032 aa8.2□□□□□ -1.1
Trim9-202ENSMUST00000110522 Gm9922Q8C3P1 144 aa8.2□□□□□ -1.1
Trim9-202ENSMUST00000110522 Wdfy4E9Q2M9 3149 aa8.2□□□□□ -1.1
Trim9-202ENSMUST00000110522 Dph3Q8K0W9 82 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 2010109I03RikQ9CQ11 111 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 Igkv1-88A0A140T8N1 120 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 Gata1P17679 413 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 Gm21748Q3UE70 102 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 VcanQ62059 3357 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 Trav9n-4A0A075B631 113 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 Ighv1-5A0A0A6YWG2 117 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 Igkv1-122A0A140T8M9 119 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 Klk12B2RVZ0 247 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 P01823 113 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 SrarpQ3ULG3 163 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 Gm5464Q3UY29 175 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 BC048502Q80Y74 154 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 Ociad2Q9D8W7 154 aa8.19□□□□□ -1.1
Trim9-202ENSMUST00000110522 Defa25Q5G864 92 aa8.18□□□□□ -1.1
Trim9-202ENSMUST00000110522 Trav11A0A0B4J1J9 114 aa8.18□□□□□ -1.1
Trim9-202ENSMUST00000110522 Gm10509O88255 85 aa8.18□□□□□ -1.1
Trim9-202ENSMUST00000110522 Rpl32P62911 135 aaKnown RBP8.18□□□□□ -1.1
Trim9-202ENSMUST00000110522 Pglyrp4Q0VB07 374 aa8.18□□□□□ -1.1
Trim9-202ENSMUST00000110522 CrygfQ9CXV3 174 aa8.18□□□□□ -1.1
Trim9-202ENSMUST00000110522 Trav14d-3-dv8A0A075B619 120 aa8.17□□□□□ -1.1
Trim9-202ENSMUST00000110522 Gm17472A0A075B683 117 aa8.17□□□□□ -1.1
Trim9-202ENSMUST00000110522 Ighv2-6-8A0A0A6YWY9 116 aa8.17□□□□□ -1.1
Trim9-202ENSMUST00000110522 Wfdc15aQ8BH89 80 aa8.17□□□□□ -1.1
Trim9-202ENSMUST00000110522 9430069I07RikQ9CX21 111 aa8.17□□□□□ -1.1
Trim9-202ENSMUST00000110522 Pla2g1bQ9Z0Y2 146 aa8.17□□□□□ -1.1
Trim9-202ENSMUST00000110522 Igkv4-78A0A0A6YYE5 119 aa8.17□□□□□ -1.1
Trim9-202ENSMUST00000110522 MifP34884 115 aaKnown RBP8.17□□□□□ -1.1
Trim9-202ENSMUST00000110522 Spry2Q9QXV8 315 aa8.17□□□□□ -1.1
Trim9-202ENSMUST00000110522 Trav4-3A0A0B4J1K1 110 aa8.17□□□□□ -1.1
Trim9-202ENSMUST00000110522 Camk2n2Q78WH7 79 aa8.17□□□□□ -1.1
Trim9-202ENSMUST00000110522 Ighv1-62-1A0A075B5U3 116 aa8.16□□□□□ -1.1
Trim9-202ENSMUST00000110522 Igkv2-109A0A075B5K6 120 aa8.16□□□□□ -1.1
Trim9-202ENSMUST00000110522 Rbx1P62878 108 aa8.16□□□□□ -1.1
Trim9-202ENSMUST00000110522 Usp24B1AY13 2617 aaKnown RBP8.16□□□□□ -1.1
Trim9-202ENSMUST00000110522 Tmem223Q9CQE2 199 aaKnown RBP8.16□□□□□ -1.1
Trim9-202ENSMUST00000110522 Cd164l2Q9D6W7 172 aa8.16□□□□□ -1.1
Trim9-202ENSMUST00000110522 Ighv8-12A0A0G2JDE1 119 aa8.15□□□□□ -1.1
Trim9-202ENSMUST00000110522 Eif4ebp1Q60876 117 aa8.15□□□□□ -1.1
Trim9-202ENSMUST00000110522 Notch1Q01705 2531 aa8.15□□□□□ -1.1
Trim9-202ENSMUST00000110522 Smim1P0C8K7 78 aa8.15□□□□□ -1.1
Trim9-202ENSMUST00000110522 Cryba4Q9JJV0 196 aa8.15□□□□□ -1.11
Trim9-202ENSMUST00000110522 Crip3Q6Q6R3 243 aa8.15□□□□□ -1.11
Trim9-202ENSMUST00000110522 Defa23Q5G866 93 aa8.14□□□□□ -1.11
Trim9-202ENSMUST00000110522 E130114P18RikF6S0S7 154 aa8.14□□□□□ -1.11
Trim9-202ENSMUST00000110522 Ly6hQ9WUC3 139 aa8.14□□□□□ -1.11
Trim9-202ENSMUST00000110522 Q9DAQ5 155 aa8.14□□□□□ -1.11
Trim9-202ENSMUST00000110522 Ighv1-59A0A0A6YXE0 117 aa8.13□□□□□ -1.11
Trim9-202ENSMUST00000110522 Foxc1Q61572 553 aa8.13□□□□□ -1.11
Trim9-202ENSMUST00000110522 Lgals4Q8K419 326 aa8.13□□□□□ -1.11
Trim9-202ENSMUST00000110522 Srsf12Q8C8K3 266 aa8.13□□□□□ -1.11
Trim9-202ENSMUST00000110522 Chchd7Q8K2Q5 85 aa8.13□□□□□ -1.11
Trim9-202ENSMUST00000110522 Cox7b2Q9D2H1 82 aa8.13□□□□□ -1.11
Trim9-202ENSMUST00000110522 Ubl5Q9EPV8 73 aa8.13□□□□□ -1.11
Trim9-202ENSMUST00000110522 A0A286YCN5 57 aa8.12□□□□□ -1.11
Trim9-202ENSMUST00000110522 Bri3P28662 125 aa8.12□□□□□ -1.11
Trim9-202ENSMUST00000110522 Ufsp1Q9CZP0 217 aa8.12□□□□□ -1.11
Trim9-202ENSMUST00000110522 Rpl18aP62717 176 aaKnown RBP8.12□□□□□ -1.11
Trim9-202ENSMUST00000110522 Samd13D3YUG0 102 aa8.12□□□□□ -1.11
Trim9-202ENSMUST00000110522 AngP21570 145 aa8.12□□□□□ -1.11
Trim9-202ENSMUST00000110522 Ube2d3P61079 147 aa8.12□□□□□ -1.11
Trim9-202ENSMUST00000110522 Ube2d2P62838 147 aa8.12□□□□□ -1.11
Trim9-202ENSMUST00000110522 Znf580Q9DB38 172 aa8.12□□□□□ -1.11
Trim9-202ENSMUST00000110522 Ube2d1P61080 147 aaKnown RBP8.11□□□□□ -1.11
Trim9-202ENSMUST00000110522 P01755 137 aa8.11□□□□□ -1.11
Trim9-202ENSMUST00000110522 Krtap27-1E9PX37 202 aa8.1□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms