Protein–RNA interactions for Protein: A0A0B4J1I6

Igkv4-69, Immunoglobulin kappa variable 4-69 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-69A0A0B4J1I6 Gm25239-201ENSMUST00000174915 86 ntBASIC27.38■■□□□ 1.97
Igkv4-69A0A0B4J1I6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Igkv4-69A0A0B4J1I6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Igkv4-69A0A0B4J1I6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Igkv4-69A0A0B4J1I6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Igkv4-69A0A0B4J1I6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Igkv4-69A0A0B4J1I6 Gm15042-201ENSMUST00000120212 883 ntBASIC24.38■■□□□ 1.49
Igkv4-69A0A0B4J1I6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Igkv4-69A0A0B4J1I6 Psd-208ENSMUST00000224556 2034 ntBASIC23.98■■□□□ 1.43
Igkv4-69A0A0B4J1I6 Gm15045-201ENSMUST00000117359 883 ntBASIC23.93■■□□□ 1.42
Igkv4-69A0A0B4J1I6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Igkv4-69A0A0B4J1I6 Gm24109-201ENSMUST00000175489 103 ntBASIC23.55■■□□□ 1.36
Igkv4-69A0A0B4J1I6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Igkv4-69A0A0B4J1I6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.52■■□□□ 1.36
Igkv4-69A0A0B4J1I6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Igkv4-69A0A0B4J1I6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Igkv4-69A0A0B4J1I6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Igkv4-69A0A0B4J1I6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Igkv4-69A0A0B4J1I6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Igkv4-69A0A0B4J1I6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Igkv4-69A0A0B4J1I6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Igkv4-69A0A0B4J1I6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Igkv4-69A0A0B4J1I6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Igkv4-69A0A0B4J1I6 Gm23366-201ENSMUST00000175022 89 ntBASIC22.94■■□□□ 1.26
Igkv4-69A0A0B4J1I6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.93■■□□□ 1.26
Igkv4-69A0A0B4J1I6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Igkv4-69A0A0B4J1I6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Igkv4-69A0A0B4J1I6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Igkv4-69A0A0B4J1I6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Igkv4-69A0A0B4J1I6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Igkv4-69A0A0B4J1I6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Igkv4-69A0A0B4J1I6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.68■■□□□ 1.22
Igkv4-69A0A0B4J1I6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv4-69A0A0B4J1I6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Igkv4-69A0A0B4J1I6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Igkv4-69A0A0B4J1I6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Igkv4-69A0A0B4J1I6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Igkv4-69A0A0B4J1I6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Igkv4-69A0A0B4J1I6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.33■■□□□ 1.17
Igkv4-69A0A0B4J1I6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Igkv4-69A0A0B4J1I6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.29■■□□□ 1.16
Igkv4-69A0A0B4J1I6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv4-69A0A0B4J1I6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.08■■□□□ 1.13
Igkv4-69A0A0B4J1I6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Igkv4-69A0A0B4J1I6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Igkv4-69A0A0B4J1I6 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.05■■□□□ 1.12
Igkv4-69A0A0B4J1I6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Igkv4-69A0A0B4J1I6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Igkv4-69A0A0B4J1I6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Igkv4-69A0A0B4J1I6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv4-69A0A0B4J1I6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Igkv4-69A0A0B4J1I6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Igkv4-69A0A0B4J1I6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv4-69A0A0B4J1I6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.71■■□□□ 1.07
Igkv4-69A0A0B4J1I6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Igkv4-69A0A0B4J1I6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Igkv4-69A0A0B4J1I6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Igkv4-69A0A0B4J1I6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.57■■□□□ 1.04
Igkv4-69A0A0B4J1I6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Igkv4-69A0A0B4J1I6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Igkv4-69A0A0B4J1I6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Igkv4-69A0A0B4J1I6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Igkv4-69A0A0B4J1I6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Igkv4-69A0A0B4J1I6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Igkv4-69A0A0B4J1I6 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.48■■□□□ 1.03
Igkv4-69A0A0B4J1I6 Gm25238-201ENSMUST00000174914 89 ntBASIC21.46■■□□□ 1.03
Igkv4-69A0A0B4J1I6 Gm27325-201ENSMUST00000175467 74 ntBASIC21.46■■□□□ 1.03
Igkv4-69A0A0B4J1I6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Igkv4-69A0A0B4J1I6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.43■■□□□ 1.02
Igkv4-69A0A0B4J1I6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.4■■□□□ 1.02
Igkv4-69A0A0B4J1I6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.29■■□□□ 1
Igkv4-69A0A0B4J1I6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv4-69A0A0B4J1I6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv4-69A0A0B4J1I6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv4-69A0A0B4J1I6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.26■□□□□ 0.99
Igkv4-69A0A0B4J1I6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv4-69A0A0B4J1I6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv4-69A0A0B4J1I6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Igkv4-69A0A0B4J1I6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv4-69A0A0B4J1I6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Igkv4-69A0A0B4J1I6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Igkv4-69A0A0B4J1I6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv4-69A0A0B4J1I6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Igkv4-69A0A0B4J1I6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv4-69A0A0B4J1I6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv4-69A0A0B4J1I6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv4-69A0A0B4J1I6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv4-69A0A0B4J1I6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21■□□□□ 0.95
Igkv4-69A0A0B4J1I6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv4-69A0A0B4J1I6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21■□□□□ 0.95
Igkv4-69A0A0B4J1I6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Igkv4-69A0A0B4J1I6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Igkv4-69A0A0B4J1I6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.94■□□□□ 0.94
Igkv4-69A0A0B4J1I6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.93■□□□□ 0.94
Igkv4-69A0A0B4J1I6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv4-69A0A0B4J1I6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Igkv4-69A0A0B4J1I6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv4-69A0A0B4J1I6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.84■□□□□ 0.93
Igkv4-69A0A0B4J1I6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Igkv4-69A0A0B4J1I6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms